EY720921

Overview
NameEY720921
Unique NameEY720921
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length822
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720921 vs. ExPASy Swiss-Prot
Match: ATPBM_ORYSJ (ATP synthase subunit beta, mitochondrial OS=Oryza sativa subsp. japonica GN=ATPB PE=1 SV=2)

HSP 1 Score: 270.011 bits (689), Expect = 1.127e-71
Identity = 133/155 (85.81%), Postives = 143/155 (92.26%), Query Frame = 1
Query:   94 KKGGGGKITDEFTGKGAIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVVGEPIDEKGDLGTEHYLPIHREVPAFVEQGTEAQILFTGIEVVDLLAP*Q 558
            K  GGGKITDEFTG GA+GQVCQVIGAVVDVRFDEGLPPILTALEV+DH++RLVLEVAQH+GE +VRTIAMDGTEGLVRGQRVLNTGSPITVPVGR TLGRIMNV+GEPIDEKGD+ T H+LPIHRE PAFVEQ TE QIL TGI+VVDLLAP Q
Sbjct:   64 KATGGGKITDEFTGAGAVGQVCQVIGAVVDVRFDEGLPPILTALEVLDHNIRLVLEVAQHLGENMVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRATLGRIMNVIGEPIDEKGDITTNHFLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQ 218          
BLAST of EY720921 vs. ExPASy Swiss-Prot
Match: ATPBM_MAIZE (ATP synthase subunit beta, mitochondrial OS=Zea mays GN=ATPB PE=2 SV=1)

HSP 1 Score: 266.544 bits (680), Expect = 1.246e-70
Identity = 132/154 (85.71%), Postives = 143/154 (92.86%), Query Frame = 1
Query:   97 KGGGGKITDEFTGKGAIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVVGEPIDEKGDLGTEHYLPIHREVPAFVEQGTEAQILFTGIEVVDLLAP*Q 558
            K GGGKITDEFTG GAIGQVCQVIGAVVDVRFDEGLPPILTALEV+D+++RLVLEVAQH+GE +VRTIAMDGTEGLVRGQRVLNTGSPITVPVGR TLGRI+NV+GEPIDEKGD+ T H+LPIHRE PAFVEQ TE QIL TGI+VVDLLAP Q
Sbjct:   66 KTGGGKITDEFTGAGAIGQVCQVIGAVVDVRFDEGLPPILTALEVLDNNIRLVLEVAQHLGENMVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRATLGRIINVIGEPIDEKGDIKTNHFLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQ 219          
BLAST of EY720921 vs. ExPASy Swiss-Prot
Match: ATPBM_HEVBR (ATP synthase subunit beta, mitochondrial OS=Hevea brasiliensis GN=ATPB PE=2 SV=1)

HSP 1 Score: 256.144 bits (653), Expect = 1.685e-67
Identity = 127/152 (83.55%), Postives = 137/152 (90.13%), Query Frame = 1
Query:  103 GGGKITDEFTGKGAIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVVGEPIDEKGDLGTEHYLPIHREVPAFVEQGTEAQILFTGIEVVDLLAP*Q 558
            GGGKITDEFTGKGAIGQVCQVIGAVVDVRFDEGLPPILT+LEV+DHS+RLVLEVAQHMGEG+VRTIAMDGTEGLVRGQRVLNTGSPITVPVGR        V+GEPIDE+GD+ T H+LPIHRE PAFV+Q TE QIL TGI+VVDLLAP Q
Sbjct:   77 GGGKITDEFTGKGAIGQVCQVIGAVVDVRFDEGLPPILTSLEVLDHSIRLVLEVAQHMGEGMVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRANPWTYHEVIGEPIDERGDIKTSHFLPIHREAPAFVDQATEQQILVTGIKVVDLLAPYQ 228          
BLAST of EY720921 vs. ExPASy Swiss-Prot
Match: ATPBM_NICPL (ATP synthase subunit beta, mitochondrial OS=Nicotiana plumbaginifolia GN=ATPB PE=1 SV=1)

HSP 1 Score: 251.521 bits (641), Expect = 4.149e-66
Identity = 124/150 (82.67%), Postives = 138/150 (92.00%), Query Frame = 1
Query:  109 GKITDEFTGKGAIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVVGEPIDEKGDLGTEHYLPIHREVPAFVEQGTEAQILFTGIEVVDLLAP*Q 558
            GKITDEFTG G+IG+VCQVIGAVVDVRFDEGLPPILTALEV+D+ +RLVLEVAQH+GE +VRTIAMDGTEGLVRGQRVLNTGSPITVPVGR TLGRI+NV+GE IDE+G + T+H+LPIHRE PAFVEQ TE QIL TGI+VVDLLAP Q
Sbjct:   77 GKITDEFTGAGSIGKVCQVIGAVVDVRFDEGLPPILTALEVLDNQIRLVLEVAQHLGENMVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRATLGRIINVIGEAIDERGPITTDHFLPIHREAPAFVEQATEQQILVTGIKVVDLLAPYQ 226          
BLAST of EY720921 vs. ExPASy Swiss-Prot
Match: ATPBM_DAUCA (ATP synthase subunit beta, mitochondrial OS=Daucus carota GN=ATPB PE=3 SV=1)

HSP 1 Score: 235.728 bits (600), Expect = 2.356e-61
Identity = 124/198 (62.63%), Postives = 142/198 (71.72%), Query Frame = 1
Query:  103 GGGKITDEFTGKGAIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVVGEPIDEKGDLGTEHYLPIHREVPAFVEQGTEAQILFTGIEVVDLLAP*QXXXXXXXXXXXXXXXXXXXMESIAQCWKGSVRFVELRMVVGRRIRE 696
            G G ITDE TG GAIGQVCQ+IGAVVDV+F+EGLPPI+TALEV+D  +RLVLEVA  +GE  VRTIAMDGTEGLVRGQ+VLNTG+PIT+PVGR TLGRI+NV+GEPID +G++ T+ YLPIHRE P FV+Q TE QIL TGI+VVDLLAP Q                   ME I    K    F      VG R RE
Sbjct:   66 GKGTITDEKTGAGAIGQVCQIIGAVVDVKFEEGLPPIMTALEVIDFEIRLVLEVAPSLGENTVRTIAMDGTEGLVRGQKVLNTGAPITIPVGRATLGRIINVIGEPIDHRGEIKTDQYLPIHREAPTFVDQATEQQILVTGIKVVDLLAPYQKGGKIGLFGGDWVGKTVLIMELINNVAKAHAVFAG----VGERTRE 259          
BLAST of EY720921 vs. ExPASy Swiss-Prot
Match: ATPBO_ARATH (ATP synthase subunit beta-3, mitochondrial OS=Arabidopsis thaliana GN=At5g08680 PE=2 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 7.094e-58
Identity = 111/152 (73.03%), Postives = 132/152 (86.84%), Query Frame = 1
Query:  109 GKITDEFTGKGAIGQVCQVIGAVVDVRFD--EGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVVGEPIDEKGDLGTEHYLPIHREVPAFVEQGTEAQILFTGIEVVDLLAP*Q 558
            GK T ++ GKGAIG+VCQVIGA+VDVRF+  EGLPPI+T+LEV DH  RLVLEV+ H+G+ VVRTIAMDGTEGLVRG++VLNTG+PITVPVGR TLGRIMNV+GEPIDE+G++ TEHYLPIHR+ PA V+  T  +IL TGI+VVDLLAP Q
Sbjct:   74 GKKTYDYGGKGAIGRVCQVIGAIVDVRFEDQEGLPPIMTSLEVQDHPTRLVLEVSHHLGQNVVRTIAMDGTEGLVRGRKVLNTGAPITVPVGRATLGRIMNVLGEPIDERGEIKTEHYLPIHRDAPALVDLATGQEILATGIKVVDLLAPYQ 225          
BLAST of EY720921 vs. ExPASy Swiss-Prot
Match: ATPBN_ARATH (ATP synthase subunit beta-2, mitochondrial OS=Arabidopsis thaliana GN=At5g08690 PE=1 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 7.094e-58
Identity = 111/152 (73.03%), Postives = 132/152 (86.84%), Query Frame = 1
Query:  109 GKITDEFTGKGAIGQVCQVIGAVVDVRFD--EGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVVGEPIDEKGDLGTEHYLPIHREVPAFVEQGTEAQILFTGIEVVDLLAP*Q 558
            GK T ++ GKGAIG+VCQVIGA+VDVRF+  EGLPPI+T+LEV DH  RLVLEV+ H+G+ VVRTIAMDGTEGLVRG++VLNTG+PITVPVGR TLGRIMNV+GEPIDE+G++ TEHYLPIHR+ PA V+  T  +IL TGI+VVDLLAP Q
Sbjct:   71 GKKTYDYGGKGAIGRVCQVIGAIVDVRFEDQEGLPPIMTSLEVQDHPTRLVLEVSHHLGQNVVRTIAMDGTEGLVRGRKVLNTGAPITVPVGRATLGRIMNVLGEPIDERGEIKTEHYLPIHRDAPALVDLATGQEILATGIKVVDLLAPYQ 222          
BLAST of EY720921 vs. ExPASy Swiss-Prot
Match: ATPBM_ARATH (ATP synthase subunit beta-1, mitochondrial OS=Arabidopsis thaliana GN=At5g08670 PE=1 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 7.094e-58
Identity = 111/152 (73.03%), Postives = 132/152 (86.84%), Query Frame = 1
Query:  109 GKITDEFTGKGAIGQVCQVIGAVVDVRFD--EGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVVGEPIDEKGDLGTEHYLPIHREVPAFVEQGTEAQILFTGIEVVDLLAP*Q 558
            GK T ++ GKGAIG+VCQVIGA+VDVRF+  EGLPPI+T+LEV DH  RLVLEV+ H+G+ VVRTIAMDGTEGLVRG++VLNTG+PITVPVGR TLGRIMNV+GEPIDE+G++ TEHYLPIHR+ PA V+  T  +IL TGI+VVDLLAP Q
Sbjct:   71 GKKTYDYGGKGAIGRVCQVIGAIVDVRFEDQEGLPPIMTSLEVQDHPTRLVLEVSHHLGQNVVRTIAMDGTEGLVRGRKVLNTGAPITVPVGRATLGRIMNVLGEPIDERGEIKTEHYLPIHRDAPALVDLATGQEILATGIKVVDLLAPYQ 222          
BLAST of EY720921 vs. ExPASy Swiss-Prot
Match: ATPB_RAT (ATP synthase subunit beta, mitochondrial OS=Rattus norvegicus GN=Atp5b PE=1 SV=2)

HSP 1 Score: 192.586 bits (488), Expect = 2.287e-48
Identity = 95/137 (69.34%), Postives = 111/137 (81.02%), Query Frame = 1
Query:  142 AIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVVGEPIDEKGDLGTEHYLPIHREVPAFVEQGTEAQILFTGIEVVDLLAP 552
            A GQ+  VIGAVVDV+FDEGLPPIL ALEV     RLVLEVAQH+GE  VRTIAMDGTEGLVRGQ+VL++G+PI +PVG  TLGRIMNV+GEPIDE+G + T+ + PIH E P F+E   E +IL TGI+VVDLLAP
Sbjct:   59 ATGQIVAVIGAVVDVQFDEGLPPILNALEVQGRESRLVLEVAQHLGESTVRTIAMDGTEGLVRGQKVLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPIKTKQFAPIHAEAPEFIEMSVEQEILVTGIKVVDLLAP 195          
BLAST of EY720921 vs. ExPASy Swiss-Prot
Match: ATPB_MOUSE (ATP synthase subunit beta, mitochondrial OS=Mus musculus GN=Atp5b PE=1 SV=2)

HSP 1 Score: 191.045 bits (484), Expect = 6.655e-48
Identity = 94/137 (68.61%), Postives = 111/137 (81.02%), Query Frame = 1
Query:  142 AIGQVCQVIGAVVDVRFDEGLPPILTALEVVDHSVRLVLEVAQHMGEGVVRTIAMDGTEGLVRGQRVLNTGSPITVPVGRVTLGRIMNVVGEPIDEKGDLGTEHYLPIHREVPAFVEQGTEAQILFTGIEVVDLLAP 552
            A G++  VIGAVVDV+FDEGLPPIL ALEV     RLVLEVAQH+GE  VRTIAMDGTEGLVRGQ+VL++G+PI +PVG  TLGRIMNV+GEPIDE+G + T+ + PIH E P F+E   E +IL TGI+VVDLLAP
Sbjct:   59 ATGRIVAVIGAVVDVQFDEGLPPILNALEVQGRDSRLVLEVAQHLGESTVRTIAMDGTEGLVRGQKVLDSGAPIKIPVGPETLGRIMNVIGEPIDERGPIKTKQFAPIHAEAPEFIEMSVEQEILVTGIKVVDLLAP 195          
The following BLAST results are available for this feature:
BLAST of EY720921 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
ATPBM_ORYSJ1.127e-7185.81ATP synthase subunit beta, mitochondrial OS=Oryza ... [more]
ATPBM_MAIZE1.246e-7085.71ATP synthase subunit beta, mitochondrial OS=Zea ma... [more]
ATPBM_HEVBR1.685e-6783.55ATP synthase subunit beta, mitochondrial OS=Hevea ... [more]
ATPBM_NICPL4.149e-6682.67ATP synthase subunit beta, mitochondrial OS=Nicoti... [more]
ATPBM_DAUCA2.356e-6162.63ATP synthase subunit beta, mitochondrial OS=Daucus... [more]
ATPBO_ARATH7.094e-5873.03ATP synthase subunit beta-3, mitochondrial OS=Arab... [more]
ATPBN_ARATH7.094e-5873.03ATP synthase subunit beta-2, mitochondrial OS=Arab... [more]
ATPBM_ARATH7.094e-5873.03ATP synthase subunit beta-1, mitochondrial OS=Arab... [more]
ATPB_RAT2.287e-4869.34ATP synthase subunit beta, mitochondrial OS=Rattus... [more]
ATPB_MOUSE6.655e-4868.61ATP synthase subunit beta, mitochondrial OS=Mus mu... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-016-A11-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720921 ID=EY720921; Name=EY720921; organism=Citrus sinensis; type=EST; length=822bp
CCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGGTACGCGACCTCAGC
AGCCGCCACTGCCCCACCGGCACAGACTCCGAAGTCGGATGTAAAGAAAG
GCGGCGGTGGTAAAATCACCGATGAGTTTACTGGAAAGGGCGCGATCGGT
CAGGTTTGTCAGGTCATCGGTGCCGTCGTTGATGTCAGATTTGACGAGGG
GTTGCCTCCGATTTTGACCGCGCTTGAAGTGGTAGATCACTCCGTTCGGT
TAGTGCTTGAGGTGGCTCAGCACATGGGTGAGGGTGTTGTTAGGACTATT
GCTATGGATGGAACTGAAGGGTTGGTTCGTGGCCAGCGCGTGCTCAATAC
TGGCTCTCCAATCACTGTACCTGTGGGGAGAGTTACTCTGGGTCGTATTA
TGAATGTCGTTGGAGAGCCTATTGATGAGAAAGGCGATCTCGGAACTGAG
CATTACTTGCCCATCCACAGAGAGGTTCCGGCATTCGTTGAGCAGGGAAC
TGAAGCACAGATCCTATTCACGGGCATCGAGGTTGTTGATCTCCTTGCTC
CATAACAAAGAGGACGGAGACTGGGGCCTGTCGGTGGGGCGGGGGGTGGA
GAGAGTGTGCGGGTGATGGAAAGTATCGCCCAGTGTTGGAAAGGCTCTGT
GCGGTTTGTGGAGTTGAGGATGGTGGTTGGAAGGCGTATCCGAGAGGCTG
TCGCTTCTTTGCTCGCGGTCATCGTCGCTTGCGGGGCGCTCGCGTAGAGG
GAGAGGGTGGGGTGGGTTGATTCCACGTGTTTGGGGGCTGAGAGTGTGGA
TGTGGGGGGGGTTGTGGGGGGG
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