EY720920

Overview
NameEY720920
Unique NameEY720920
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length892
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720920 vs. ExPASy Swiss-Prot
Match: RTNLA_ARATH (Reticulon-like protein B1 OS=Arabidopsis thaliana GN=RTNLB1 PE=1 SV=1)

HSP 1 Score: 268.855 bits (686), Expect = 2.847e-71
Identity = 131/199 (65.83%), Postives = 161/199 (80.90%), Query Frame = 1
Query:  211 AFKSKVFRLFGREKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSIVGNWCNFVTLFYIVLVLLHTVPGDYEKYEEQMDSFG*EGTIEIKNPYSVFG*KVLKK 807
            + KSKV+RLFGRE+P+H VLG GKPADIF+W+NKK+S GVLGGATA WV+FEL+EYHL+TL+CH+ I+ LAVLFLWSNA+ FINKSPP+IP V +PE+ +L+ AS LR EINR  + LREIASGRDLKKFL  IAGLW+LSI+G   NF+TL YI LVLL TVP  Y+KYE+++D  G +  IE+K  Y+V   KVL K
Sbjct:   65 SMKSKVYRLFGREQPVHKVLGGGKPADIFMWKNKKMSGGVLGGATAAWVVFELMEYHLLTLLCHVMIVVLAVLFLWSNATMFINKSPPKIPEVHIPEEPILQLASGLRIEINRGFSSLREIASGRDLKKFLIAIAGLWVLSILGGCFNFLTLAYIALVLLFTVPLAYDKYEDKVDPLGEKAMIELKKQYAVLDEKVLSK 263          
BLAST of EY720920 vs. ExPASy Swiss-Prot
Match: RTNLC_ARATH (Reticulon-like protein B3 OS=Arabidopsis thaliana GN=RTNLB3 PE=1 SV=1)

HSP 1 Score: 268.085 bits (684), Expect = 4.856e-71
Identity = 135/206 (65.53%), Postives = 161/206 (78.16%), Query Frame = 1
Query:  211 AFKSKVFRLFGREKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSIVGNWCNFVTLFYIVLVLLHTVPGDYEKYEEQMDSFG*EGTIEIKNPYSVFG*KVLKKGWSRIPK 828
            + K+K++RLFGRE+P+H + G GKPADIFLWRNKK+S GVLG AT  W+LFELLEY+L+TL  HISIL+LAVLFLWS+ASTFI+KSP  IP V +PE  VL+ AS LR EINR   VLR+IASGRDLKKFL VIAGLW+LS VG+ CNF+TL YI  VLL T+P  YEKYE+++D FG +   EIK  Y  F  KVL K  S+IPK
Sbjct:   40 SLKTKIYRLFGREQPLHKLFGGGKPADIFLWRNKKVSGGVLGAATVSWILFELLEYNLLTLFGHISILALAVLFLWSSASTFIHKSPLHIPEVHIPEDVVLQLASGLRIEINRGFTVLRDIASGRDLKKFLLVIAGLWVLSKVGSSCNFLTLIYIATVLLFTIPVLYEKYEDKVDDFGEKAMREIKKQYVEFDVKVLSKVMSKIPK 245          
BLAST of EY720920 vs. ExPASy Swiss-Prot
Match: RTNLD_ARATH (Reticulon-like protein B4 OS=Arabidopsis thaliana GN=RTNLB4 PE=1 SV=1)

HSP 1 Score: 266.159 bits (679), Expect = 1.845e-70
Identity = 128/206 (62.14%), Postives = 160/206 (77.67%), Query Frame = 1
Query:  211 AFKSKVFRLFGREKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSIVGNWCNFVTLFYIVLVLLHTVPGDYEKYEEQMDSFG*EGTIEIKNPYSVFG*KVLKKGWSRIPK 828
            +FKSK++RLFGREKP+H VLG GKPADIFLWRNKK+S GVLG  TA WVLFEL EYHL+  +CH +I +LA LFLWSNA TFI+KS P IP V +PE  +L+  S LR EINR L +LR IASG+D+KKF+ VIAGLW+LSI+G+  NF+TLFY   VLL T+P  YEKYE+++D++G +   EIK  Y+V   KVL+K  S+IP+
Sbjct:   44 SFKSKIYRLFGREKPVHKVLGGGKPADIFLWRNKKVSGGVLGAVTASWVLFELFEYHLLAFLCHFAIFALAALFLWSNACTFIHKSTPHIPEVHIPEDPILQLVSGLRIEINRGLTLLRNIASGKDVKKFILVIAGLWVLSIIGSCYNFLTLFYTATVLLFTIPVLYEKYEDKVDAYGEKAMREIKKQYAVLDEKVLRKVISKIPR 249          
BLAST of EY720920 vs. ExPASy Swiss-Prot
Match: RTNLB_ARATH (Reticulon-like protein B2 OS=Arabidopsis thaliana GN=RTNLB2 PE=1 SV=1)

HSP 1 Score: 262.692 bits (670), Expect = 2.040e-69
Identity = 125/199 (62.81%), Postives = 161/199 (80.90%), Query Frame = 1
Query:  211 AFKSKVFRLFGREKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSIVGNWCNFVTLFYIVLVLLHTVPGDYEKYEEQMDSFG*EGTIEIKNPYSVFG*KVLKK 807
            + KSKV+RLFGRE+P+H VLG GKPADIF+W++KK+S GV GGAT  WVLFEL+EYHL+TL+CH+ I++LAVLFLWSNA+ FI+KSPP+IP V +PE+ +L+ AS LR EINR ++ LREIASGRD+KKFL  IAGLW+LSI+G   +F+TL YI LVLL TVP  Y+KYE+++DS+G +   E+K  Y+V   KV  K
Sbjct:   61 SLKSKVYRLFGRERPVHKVLGGGKPADIFMWKDKKMSGGVFGGATVAWVLFELMEYHLLTLLCHVMIVALAVLFLWSNATMFIHKSPPKIPEVHIPEEPLLQLASGLRIEINRGISSLREIASGRDIKKFLSAIAGLWVLSILGGCYSFLTLAYIALVLLFTVPLFYDKYEDKVDSYGEKAMAELKKQYAVLDAKVFSK 259          
BLAST of EY720920 vs. ExPASy Swiss-Prot
Match: RTNLE_ARATH (Reticulon-like protein B5 OS=Arabidopsis thaliana GN=RTNLB5 PE=1 SV=1)

HSP 1 Score: 254.988 bits (650), Expect = 4.254e-67
Identity = 128/242 (52.89%), Postives = 169/242 (69.83%), Query Frame = 1
Query:   85 MAEHAPEHESADKSLVEKITXXXXXXXXXXXXXXXXXXXXXX-AFKSKVFRLFGREKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSIVGNWCNFVTLFYIVLVLLHTVPGDYEKYEEQMDSFG*EGTIEIKNPYSVFG*KVLKK 807
            MAE   +    ++SL+EKI+                       A K+K++R+FGREKP+H VLG GKPAD+FLWR+KK+S  VLG ATA+WVLFEL+EYHL++L+CHISIL+L  LFLWSNA T INK+ P+IP + +PE+  L  AS+LR E+N+A  +LR IA GRDLKKFL V+ GLW++S+VGNW NF+TL YI  V+LHTVP  YEK+E+++D    +   E++  Y VF  KVL K
Sbjct:    1 MAEEIEKSVPTEESLMEKISEKIHHHDSSSSSESEYEKPDSPSAVKAKIYRMFGREKPVHKVLGGGKPADVFLWRDKKLSGAVLGVATAIWVLFELVEYHLLSLLCHISILALGGLFLWSNAHTLINKTSPQIPEIHVPEEAFLVVASSLRNELNQAFVILRSIALGRDLKKFLMVVVGLWIISVVGNWFNFLTLVYICFVILHTVPMLYEKHEDKVDPLAEKAMKELQKQYVVFDEKVLSK 242          
BLAST of EY720920 vs. ExPASy Swiss-Prot
Match: RTNLF_ARATH (Reticulon-like protein B6 OS=Arabidopsis thaliana GN=RTNLB6 PE=1 SV=1)

HSP 1 Score: 246.514 bits (628), Expect = 1.513e-64
Identity = 119/199 (59.80%), Postives = 152/199 (76.38%), Query Frame = 1
Query:  211 AFKSKVFRLFGREKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSIVGNWCNFVTLFYIVLVLLHTVPGDYEKYEEQMDSFG*EGTIEIKNPYSVFG*KVLKK 807
            A K+K++RLFGREKP+H VLG G PAD+FLWR+KK+SA VLG ATA+WVLFEL+EYH ++LVCHI I +LA LFL SNA  F+NK+PP+IP + + E+  L   SALR E+N+A  +LR IA GRDLKKFL V+ GLW++S+VGNW NF+TL YI  V+LHTVP  YEK+E+++D    +   E+K  Y VF  KVL K
Sbjct:   44 ALKAKIYRLFGREKPVHKVLGGGLPADVFLWRDKKLSASVLGVATAIWVLFELVEYHFLSLVCHILIFALAALFLLSNAHAFMNKTPPKIPEIHIKEEHFLMIVSALRNELNQAFVILRSIALGRDLKKFLMVVFGLWIISVVGNWFNFLTLVYICFVVLHTVPMLYEKHEDKVDPVAEKTLKELKKHYMVFDEKVLSK 242          
BLAST of EY720920 vs. ExPASy Swiss-Prot
Match: RTNLG_ARATH (Reticulon-like protein B7 OS=Arabidopsis thaliana GN=RTNLB7 PE=2 SV=2)

HSP 1 Score: 197.593 bits (501), Expect = 8.060e-50
Identity = 96/194 (49.48%), Postives = 134/194 (69.07%), Query Frame = 1
Query:  226 VFRLFGREKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSIVGNWCNFVTLFYIVLVLLHTVPGDYEKYEEQMDSFG*EGTIEIKNPYSVFG*KVLKK 807
            ++R+FGRE+PIH VLG GKPAD+ LWR+KK++ G+L   T +W+LF      L+T +C  SIL L + FLWSNA   +NKSP  +  + +PEK +L+ ASA+ +E+N A A LR IA  RD+K F+  + GLWL+S++GNW +F++L YI  VL+HTVP  YEKYE+++D    +  IE+K  Y VF  K L K
Sbjct:   51 IYRMFGRERPIHMVLGGGKPADVLLWRDKKVTLGLLSAVTVIWLLFGFGGRRLLTSLCRGSILFLLLSFLWSNA---LNKSPENMMDIYIPEKPLLQAASAMTFELNCAFATLRSIALERDIKNFVMAVIGLWLVSVIGNWFSFLSLLYICFVLIHTVPMLYEKYEDEIDPIAEKAVIEMKKHYQVFEAKFLSK 241          
BLAST of EY720920 vs. ExPASy Swiss-Prot
Match: RTNLH_ARATH (Reticulon-like protein B8 OS=Arabidopsis thaliana GN=RTNLB8 PE=1 SV=1)

HSP 1 Score: 190.66 bits (483), Expect = 9.853e-48
Identity = 99/212 (46.70%), Postives = 141/212 (66.51%), Query Frame = 1
Query:  220 SKVFRLFGREKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSIVGNWCNFVTLFYIVLVLLHTVPGDYEKYEEQMDSFG*EGTIEIKNPYSVFG*KVLKKGW-SRIP--KVG*RRR 846
            S+  RLF R+KPIHHVLG GK AD+ LWRNKKISA VL GATA+WVLFE + +H ++LVC+  +L +   F+WSNAS F+N+S   +P + LP+ F  E   A+  E+NR L  L+++A   +LK+FL  + GLW+ ++VG+ CNF+T+ YI  V  HT+P  YE+YE+++D F     ++  + Y     K L  G+ SRIP  K G ++R
Sbjct:   40 SRFNRLFDRQKPIHHVLGGGKSADVLLWRNKKISASVLMGATAIWVLFEWINFHFLSLVCYALLLGMIAQFVWSNASGFLNRSQSRVPRLVLPKDFFAEVGVAVGKEVNRGLLFLQDLACKGNLKQFLMAVIGLWVAAMVGSCCNFLTVLYIGFVGAHTMPVLYERYEDEVDGFMDSMIMKFHSHY-----KKLDTGFLSRIPSGKFGLKKR 246          
BLAST of EY720920 vs. ExPASy Swiss-Prot
Match: RTNLI_ARATH (Reticulon-like protein B9 OS=Arabidopsis thaliana GN=RTNLB9 PE=2 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 4.747e-34
Identity = 75/195 (38.46%), Postives = 111/195 (56.92%), Query Frame = 1
Query:  223 KVFRLFGREKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSIVGNWCNFVTLFYIVLVLLHTVPGDYEKYEEQMDSFG*EGTIEIKNPYSVFG*KVLKK 807
            K  +LF R++ IH + G GK ADI LWR  KI+A ++ G + +W L E++EY+ ITL+CH S+ S+   F+WS AS F+N   P IP V L E    + A +     N+ L  L ++A GRD   F      L+++SI+G + NFV L +I  V + T+P  YE YE+ +D+   +   ++K  Y      VL K
Sbjct:   19 KTTKLFTRQRSIHSIFGGGKVADILLWREPKIAATLVIGVSILWFLMEVVEYNFITLICHASMTSMLFFFIWSTASDFLNWERPLIPEVVLDESSFKQLARSFHVRFNQILTKLLDVACGRDPPLFFLTTISLYIVSIIGTYFNFVNLLFIGFVSMQTLPVMYEMYEDDVDTAAGKLMRKMKKLYKKVDTNVLSK 213          
BLAST of EY720920 vs. ExPASy Swiss-Prot
Match: RTNLL_ARATH (Reticulon-like protein B12 OS=Arabidopsis thaliana GN=RTNLB12 PE=2 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 2.064e-29
Identity = 60/165 (36.36%), Postives = 101/165 (61.21%), Query Frame = 1
Query:  232 RLFGREKPIHHVLGAGKPADIFLWRNKKISAGVLGGATAMWVLFELLEYHLITLVCHISILSLAVLFLWSNASTFINKSPPEIPVVTLPEKFVLEFASALRYEINRALAVLREIASGRDLKKFLGVIAGLWLLSIVGNWCNFVTLFYIVLVLLHTVPGDYEKYEE 726
            +LF R++ IH +LG G  AD+ LWR K +S G++    A W++FE   Y + TL+  + +L L++LFLWS +++ +N+  P +P   + E    E +  LR  +N+ L V  +IA  RD + +  V   L+LLS++G+  +F TL +  ++++ TVP  YE+YE+
Sbjct:    7 KLFNRDRTIHEILGGGIVADVMLWRKKNVSVGIVTVTIASWMVFEAFAYTIFTLISSVLLLLLSILFLWSKSASILNRPSPPLPEFQISEAMAEEASIWLRIHVNKLLQVSHDIAMARDSELYTKVAVSLFLLSLIGSLMDFQTLCHTSVLVVMTVPAFYERYED 171          
The following BLAST results are available for this feature:
BLAST of EY720920 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
RTNLA_ARATH2.847e-7165.83Reticulon-like protein B1 OS=Arabidopsis thaliana ... [more]
RTNLC_ARATH4.856e-7165.53Reticulon-like protein B3 OS=Arabidopsis thaliana ... [more]
RTNLD_ARATH1.845e-7062.14Reticulon-like protein B4 OS=Arabidopsis thaliana ... [more]
RTNLB_ARATH2.040e-6962.81Reticulon-like protein B2 OS=Arabidopsis thaliana ... [more]
RTNLE_ARATH4.254e-6752.89Reticulon-like protein B5 OS=Arabidopsis thaliana ... [more]
RTNLF_ARATH1.513e-6459.80Reticulon-like protein B6 OS=Arabidopsis thaliana ... [more]
RTNLG_ARATH8.060e-5049.48Reticulon-like protein B7 OS=Arabidopsis thaliana ... [more]
RTNLH_ARATH9.853e-4846.70Reticulon-like protein B8 OS=Arabidopsis thaliana ... [more]
RTNLI_ARATH4.747e-3438.46Reticulon-like protein B9 OS=Arabidopsis thaliana ... [more]
RTNLL_ARATH2.064e-2936.36Reticulon-like protein B12 OS=Arabidopsis thaliana... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-016-A10-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720920 ID=EY720920; Name=EY720920; organism=Citrus sinensis; type=EST; length=892bp
CACGCGTCCGCGCTCTCTCTCGTTCTAGAGTCTAGTACATTTTTCAATTC
ATTTTCATCGGCGCTTACTCGGCGGCAGAGATCTATGGCGGAACATGCAC
CTGAGCACGAATCAGCCGACAAATCACTGGTGGAGAAGATCACGGATAAG
ATCCATGGCCACGACTCCTCGTCATCTGACTCCGATGACGACAAGCCGTC
GTCTATTGACGCCTTTAAGTCCAAAGTATTCAGGCTCTTCGGAAGAGAAA
AACCTATTCACCATGTCCTCGGAGCTGGAAAACCTGCTGATATTTTCCTA
TGGAGGAACAAGAAAATCTCTGCTGGTGTGCTAGGTGGAGCCACTGCAAT
GTGGGTTCTCTTTGAGTTGCTGGAATACCATTTAATCACTTTGGTCTGCC
ATATATCGATTCTCTCTCTGGCTGTTCTCTTCCTGTGGTCCAATGCATCC
ACATTTATCAACAAATCACCGCCAGAGATTCCAGTTGTTACACTTCCTGA
GAAGTTTGTCCTTGAATTCGCCTCTGCCTTGAGGTATGAAATCAACCGAG
CCTTGGCTGTCCTGCGGGAAATTGCGTCTGGAAGGGACTTGAAGAAGTTT
CTTGGTGTCATTGCTGGCTTGTGGCTTTTGTCTATTGTCGGTAATTGGTG
CAACTTCGTGACATTATTCTACATTGTATTGGTTTTGCTACACACCGTGC
CCGGTGATTATGAGAAGTACGAGGAACAGATGGATTCATTTGGGTGAGAA
GGCACNATTGAGATCAAGAACCCATATTCAGTCTTTGGATGAAAGGTTTT
GAAAAAGGGTTGGAGTCGAATCCCCAAGGTGGGTTGAAGAAGAAGGATGC
AAGACAAAAATGGTCAGGTTTTGAAACCCCATGGTCTGGGGG
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