EY720916

Overview
NameEY720916
Unique NameEY720916
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length859
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720916 vs. ExPASy Swiss-Prot
Match: BRAF_PSEAE (High-affinity branched-chain amino acid transport ATP-binding protein braF OS=Pseudomonas aeruginosa GN=braF PE=3 SV=1)

HSP 1 Score: 138.272 bits (347), Expect = 5.450e-32
Identity = 75/178 (42.13%), Postives = 110/178 (61.80%), Query Frame = 1
Query:   19 HEMAALGVARTFQNLELFSALTVRENALLGTYAH-GANTASRLL-----RPANAEARERVEHLLERVGLADFLDTPACSLDFGRQKMLELARALAISPKLLLLDEPAAGLRNREIETLDHILTELCERDGITVLLVEHVMQLVMSISDRITVMSFGEKIAEGTPGEVGSEPGVMEAYL 534
            H++A  GV RTFQN+ LF  +T  EN L+  + H   N  + L      R +  EA E   H LE V L +F +  A +L +G+Q+ LE+AR +   P++L+LDEPAAGL  +E + L  ++ +L     +TVLL+EH M+LVMSISD I V++ G  +A+GTP ++   P V++AYL
Sbjct:   75 HKIARKGVVRTFQNVRLFKEMTAVENLLVAQHRHLNTNFLAGLFKTPAFRRSEREAMEYAAHWLEEVNLTEFANRSAGTLAYGQQRRLEIARCMMTRPRILMLDEPAAGLNPKETDDLKALIAKLRSEHNVTVLLIEHDMKLVMSISDHIVVINQGAPLADGTPEQIRDNPDVIKAYL 252          
BLAST of EY720916 vs. ExPASy Swiss-Prot
Match: LIVG_SALTY (High-affinity branched-chain amino acid transport ATP-binding protein livG OS=Salmonella typhimurium GN=livG PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 3.533e-31
Identity = 76/177 (42.94%), Postives = 110/177 (62.15%), Query Frame = 1
Query:   22 EMAALGVARTFQNLELFSALTVRENALLGTYAH-GANTASRLL-----RPANAEARERVEHLLERVGLADFLDTPACSLDFGRQKMLELARALAISPKLLLLDEPAAGLRNREIETLDHILTELCERDGITVLLVEHVMQLVMSISDRITVMSFGEKIAEGTPGEVGSEPGVMEAYL 534
            ++A +GV RTFQ++ LF  +TV EN L+  +        S LL     R A +EA +R    LER+GL +  +  A +L +G Q+ LE+AR +   P++L+LDEPAAGL  +E + LD ++ EL      T+LL+EH M+LVM ISDRI V++ G  +A GTP E+ + P V+ AYL
Sbjct:   76 QIARMGVVRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAQSEALDRAATWLERIGLLEHANRQASNLAYGDQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNHHNTTILLIEHDMKLVMGISDRIYVVNQGTPLANGTPEEIRNNPDVIRAYL 252          
BLAST of EY720916 vs. ExPASy Swiss-Prot
Match: LIVG_SALTI (High-affinity branched-chain amino acid transport ATP-binding protein livG OS=Salmonella typhi GN=livG PE=3 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 3.533e-31
Identity = 76/177 (42.94%), Postives = 110/177 (62.15%), Query Frame = 1
Query:   22 EMAALGVARTFQNLELFSALTVRENALLGTYAH-GANTASRLL-----RPANAEARERVEHLLERVGLADFLDTPACSLDFGRQKMLELARALAISPKLLLLDEPAAGLRNREIETLDHILTELCERDGITVLLVEHVMQLVMSISDRITVMSFGEKIAEGTPGEVGSEPGVMEAYL 534
            ++A +GV RTFQ++ LF  +TV EN L+  +        S LL     R A +EA +R    LER+GL +  +  A +L +G Q+ LE+AR +   P++L+LDEPAAGL  +E + LD ++ EL      T+LL+EH M+LVM ISDRI V++ G  +A GTP E+ + P V+ AYL
Sbjct:   76 QIARMGVVRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAQSEALDRAATWLERIGLLEHANRQASNLAYGDQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNHHNTTILLIEHDMKLVMGISDRIYVVNQGTPLANGTPEEIRNNPDVIRAYL 252          
BLAST of EY720916 vs. ExPASy Swiss-Prot
Match: LIVG_SHIFL (High-affinity branched-chain amino acid transport ATP-binding protein livG OS=Shigella flexneri GN=livG PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 6.026e-31
Identity = 75/179 (41.90%), Postives = 111/179 (62.01%), Query Frame = 1
Query:   22 EMAALGVARTFQNLELFSALTVRENALL--------GTYAHGANTASRLLRPANAEARERVEHLLERVGLADFLDTPACSLDFGRQKMLELARALAISPKLLLLDEPAAGLRNREIETLDHILTELCERDGITVLLVEHVMQLVMSISDRITVMSFGEKIAEGTPGEVGSEPGVMEAYL 534
            ++A +GV RTFQ++ LF  +TV EN L+        G ++    T S   R A +EA +R    LER+GL +  +  A +L +G Q+ LE+AR +   P++L+LDEPAAGL  +E + LD ++ EL      T+LL+EH M+LVM ISDRI V++ G  +A GTP ++ + P V+ AYL
Sbjct:   76 QIARMGVVRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPS--FRRAQSEALDRAATWLERIGLLEHANRQASNLAYGDQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNHHNTTILLIEHDMKLVMGISDRIYVVNQGTPLANGTPEQIRNNPDVIRAYL 252          
BLAST of EY720916 vs. ExPASy Swiss-Prot
Match: LIVG_ECOLI (High-affinity branched-chain amino acid transport ATP-binding protein livG OS=Escherichia coli (strain K12) GN=livG PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 6.026e-31
Identity = 75/179 (41.90%), Postives = 111/179 (62.01%), Query Frame = 1
Query:   22 EMAALGVARTFQNLELFSALTVRENALL--------GTYAHGANTASRLLRPANAEARERVEHLLERVGLADFLDTPACSLDFGRQKMLELARALAISPKLLLLDEPAAGLRNREIETLDHILTELCERDGITVLLVEHVMQLVMSISDRITVMSFGEKIAEGTPGEVGSEPGVMEAYL 534
            ++A +GV RTFQ++ LF  +TV EN L+        G ++    T S   R A +EA +R    LER+GL +  +  A +L +G Q+ LE+AR +   P++L+LDEPAAGL  +E + LD ++ EL      T+LL+EH M+LVM ISDRI V++ G  +A GTP ++ + P V+ AYL
Sbjct:   76 QIARMGVVRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPS--FRRAQSEALDRAATWLERIGLLEHANRQASNLAYGDQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNHHNTTILLIEHDMKLVMGISDRIYVVNQGTPLANGTPEQIRNNPDVIRAYL 252          
BLAST of EY720916 vs. ExPASy Swiss-Prot
Match: LIVG_ECO57 (High-affinity branched-chain amino acid transport ATP-binding protein livG OS=Escherichia coli O157:H7 GN=livG PE=3 SV=1)

HSP 1 Score: 134.806 bits (338), Expect = 6.026e-31
Identity = 75/179 (41.90%), Postives = 111/179 (62.01%), Query Frame = 1
Query:   22 EMAALGVARTFQNLELFSALTVRENALL--------GTYAHGANTASRLLRPANAEARERVEHLLERVGLADFLDTPACSLDFGRQKMLELARALAISPKLLLLDEPAAGLRNREIETLDHILTELCERDGITVLLVEHVMQLVMSISDRITVMSFGEKIAEGTPGEVGSEPGVMEAYL 534
            ++A +GV RTFQ++ LF  +TV EN L+        G ++    T S   R A +EA +R    LER+GL +  +  A +L +G Q+ LE+AR +   P++L+LDEPAAGL  +E + LD ++ EL      T+LL+EH M+LVM ISDRI V++ G  +A GTP ++ + P V+ AYL
Sbjct:   76 QIARMGVVRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPS--FRRAQSEALDRAATWLERIGLLEHANRQASNLAYGDQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNHHNTTILLIEHDMKLVMGISDRIYVVNQGTPLANGTPEQIRNNPDVIRAYL 252          
BLAST of EY720916 vs. ExPASy Swiss-Prot
Match: LIVG_ARCFU (Probable branched-chain amino acid transport ATP-binding protein livG OS=Archaeoglobus fulgidus GN=livG PE=3 SV=2)

HSP 1 Score: 101.679 bits (252), Expect = 5.653e-21
Identity = 65/182 (35.71%), Postives = 103/182 (56.59%), Query Frame = 1
Query:    1 ITKKKPHEMAALGVARTFQNLELFSALTVRENALLGTYAHGA----NTASRLLRPANAEARERVEHLLERVGLADFLDTPACSLDFGRQKMLELARALAISPKLLLLDEPAAGLRNREIETLDHILTELCERDGITVLLVEHVMQLVMSISDRITVMSFGEKIAEGTPGEVGSEPGVMEAYL 534
            IT K PHE++ LG+ RTFQ  +    +TV EN L+    +G     + + R L+    E  E+   +LE + L    D+ A +L  G+ K+LE+ARA+    KLL++DEP AG+      ++     EL ++ G++ L+VEH + +V+  +D I VM+ G  IAEG   ++ + P V+E YL
Sbjct:   67 ITNKPPHEISRLGIVRTFQIPQPLKKMTVLENLLIAPEGYGERIFHSVSGRWLKEEE-EIVEKAFRILEFLKLDHLWDSEAQNLSGGQLKLLEVARAMMKDAKLLIMDEPIAGVNPVLSHSMLERFVEL-KKMGVSFLIVEHRLDIVLKYTDHIYVMANGSVIAEGKEEDILNNPKVVEVYL 246          
BLAST of EY720916 vs. ExPASy Swiss-Prot
Match: LIVG_METJA (Probable branched-chain amino acid transport ATP-binding protein livG OS=Methanocaldococcus jannaschii GN=livG PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.066e-19
Identity = 64/186 (34.41%), Postives = 101/186 (54.30%), Query Frame = 1
Query:    1 ITKKKPHEMAALGVARTFQNLELFSALTVRENALLGTYAHGANTASRLLR----PANAEARERVEHLLERVGLADFLDTPACSLDFGRQKMLELARALAISPKLLLLDEPAAGLRNREIETLDHILTELCERDGITVLLVEHVMQLVMSISDRITVMSFGEKIAEGTPGE----VGSEPGVMEAYL 534
            IT K+P E+   G+ RTFQ  +    +TV EN L+G    G +  + L      P   E  E+   +LE + L+   D  A  L  G+ K++E+ RAL  +PK++++DEP AG+       + + + EL +  GIT L++EH + +V++  D + VM  G+ IAEG   E    V S+P V+E Y+
Sbjct:   71 ITNKEPAELYHYGIVRTFQTPQPLKEMTVLENLLIGEINPGESPLNSLFYKKWIPKEEEMVEKAFKILEFLKLSHLYDRKAGELSGGQMKLVEIGRALMTNPKMIVMDEPIAGVAPGLAHDIFNHVLEL-KAKGITFLIIEHRLDIVLNYIDHLYVMFNGQIIAEGRGEEEIKNVLSDPKVVEIYI 255          
BLAST of EY720916 vs. ExPASy Swiss-Prot
Match: CYSA2_SHEON (Sulfate/thiosulfate import ATP-binding protein cysA 2 OS=Shewanella oneidensis GN=cysA2 PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.792e-17
Identity = 58/159 (36.48%), Postives = 81/159 (50.94%), Query Frame = 1
Query:   37 GVARTFQNLELFSALTVRENALLGTYAHGANTASRLLRPANAEARERVEHLLERVGLADFLDTPACSLDFGRQKMLELARALAISPKLLLLDEPAAGLRNREIETLDHILTELCERDGITVLLVEHVMQLVMSISDRITVMSFGEKIAEGTPGEVGSEP 513
            GV   FQ+  LF  +TV EN      A+G     R  RP+ AE  E+V  LL+ V L    D     L  G+++ + LARALA+ PK+LLLDEP   L  +    L   L  L +   +T + V H  +  + ++D+I VM+ G    +GTP EV   P
Sbjct:   75 GVGFVFQHYALFKHMTVFENV-----AYGLTVRPRKTRPSKAEIAEKVHSLLKLVQLDWTADRYPSQLSGGQRQRIALARALAVEPKVLLLDEPFGALDAKVRAELRRWLRRLHDEINVTTVFVTHDQEEALEVADKIVVMNKGRIEQQGTPEEVYDTP 228          
BLAST of EY720916 vs. ExPASy Swiss-Prot
Match: POTA_LACBA (Spermidine/putrescine import ATP-binding protein potA OS=Lactobacillus brevis (strain ATCC 367 / JCM 1170) GN=potA PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.953e-17
Identity = 55/158 (34.81%), Postives = 84/158 (53.16%), Query Frame = 1
Query:   40 VARTFQNLELFSALTVRENALLGTYAHGANTASRLLRPANAEARERVEHLLERVGLADFLDTPACSLDFGRQKMLELARALAISPKLLLLDEPAAGLRNREIETLDHILTELCERDGITVLLVEHVMQLVMSISDRITVMSFGEKIAEGTPGEVGSEP 513
            V   FQ+  LF  +TV EN   G           L +   +E  ERV   L  V LAD+ D    +L  G+Q+ + +ARA+ + P++LLLDEP + L  +    + + L +L +R GIT L V H  +  +++SD I VM+ GE +  G+P ++  EP
Sbjct:   79 VNTVFQDYALFPHMTVAENVAFGL---------TLQKRPKSEIAERVNQALRLVQLADYGDRAISALSGGQQQRIAIARAIVMQPQVLLLDEPLSALDAKLRRQMQYELRDLQQRLGITFLFVTHDQEEALAMSDEIFVMNQGEILQSGSPVDIYDEP 227          
The following BLAST results are available for this feature:
BLAST of EY720916 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
BRAF_PSEAE5.450e-3242.13High-affinity branched-chain amino acid transport ... [more]
LIVG_SALTY3.533e-3142.94High-affinity branched-chain amino acid transport ... [more]
LIVG_SALTI3.533e-3142.94High-affinity branched-chain amino acid transport ... [more]
LIVG_SHIFL6.026e-3141.90High-affinity branched-chain amino acid transport ... [more]
LIVG_ECOLI6.026e-3141.90High-affinity branched-chain amino acid transport ... [more]
LIVG_ECO576.026e-3141.90High-affinity branched-chain amino acid transport ... [more]
LIVG_ARCFU5.653e-2135.71Probable branched-chain amino acid transport ATP-b... [more]
LIVG_METJA1.066e-1934.41Probable branched-chain amino acid transport ATP-b... [more]
CYSA2_SHEON3.792e-1736.48Sulfate/thiosulfate import ATP-binding protein cys... [more]
POTA_LACBA4.953e-1734.81Spermidine/putrescine import ATP-binding protein p... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-016-A04-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720916 ID=EY720916; Name=EY720916; organism=Citrus sinensis; type=EST; length=859bp
ATCACGAAGAAGAAGCCGCACGAGATGGCCGCGCTGGGCGTGGCCCGCAC
CTTCCAGAACCTGGAACTGTTCAGCGCGCTGACGGTGCGCGAGAACGCGC
TGCTGGGCACCTATGCGCACGGCGCCAACACGGCCTCGCGCCTGCTGCGC
CCGGCCAATGCCGAGGCGCGCGAACGCGTCGAGCACCTGCTGGAACGCGT
CGGCCTGGCCGATTTCCTCGACACGCCCGCGTGCAGCCTGGACTTCGGCC
GCCAGAAGATGCTGGAACTGGCGCGCGCGCTGGCCATCTCGCCCAAGCTG
CTGTTGCTGGACGAGCCCGCCGCCGGCCTGCGCAACCGCGAGATCGAGAC
ACTCGACCACATCCTCACCGAACTGTGCGAACGCGACGGTATCACGGTGC
TGCTGGTCGAGCACGTGATGCAGCTGGTGATGTCGATCTCCGATCGCATC
ACCGTCATGTCGTTCGGCGAGAAGATCGCCGAAGGCACGCCCGGGGAGGT
GGGCAGCGAGCCGGGGGTGATGGAAGCCTATCTGGGCCAGGGGGGCCCCC
TTGGTTGAGAACGGGGTTAGATGGAGTGCTGGGCGCCGGCGAAGGGTGAT
CGGAGCGGCTGGGGTTGTGGCGGTTGAAGTGCCGCGGGCGGCGGGGTGGT
GGGGGTGTGGGCGCAGGGGTGGGGGGAGGGGGGGTGGGGGGGGGGGGGCG
GGGGGGGGGAGGGGGGGGGGGGGGGGGGCGGGGGGGCGCGGGGGGGGGGG
GCGGCGGGGGGCGGGGTATGCTGCGCGATGCAGGGTGATAGCGATAAAGG
AAGAGAGGGAGGGGAATGTCGGGCGGGAGTCGGGGCCACGGGGGGGGTGG
GGGGGGAGA
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