EY720904
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY720904 vs. ExPASy Swiss-Prot
Match: CPSF3_HUMAN (Cleavage and polyadenylation specificity factor subunit 3 OS=Homo sapiens GN=CPSF3 PE=1 SV=1) HSP 1 Score: 291.582 bits (745), Expect = 4.079e-78 Identity = 144/255 (56.47%), Postives = 179/255 (70.20%), Query Frame = 3 Query: 15 TRPDINRSMDRIEVLDFHQTVEVNGIKFWCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAELPQFSPDICIIESTYGVQLHQPRNIRERRFTDVIHSTISQGGRVLIPAYALGRAQELLLILDEYWSNHPEFHNIPIYYASPLAKKCMAVYQTYILSMNERIPHQFANSNPFKFKHISPLNSIDDLSDVGPFSGDGKPGVGTXWFV*TII*YLGALDTKMLVSYQVILSKGTLAKTLFSEPKEVPLM 779 T D+ SMD+IE ++FH+ EV GIKFWCY AGHVLGAAMFM++IAGV++LYTGD+SR+EDRHL AAE+P PDI IIESTYG +H+ R RE RF + +H +++GGR LIP +ALGRAQELLLILDEYW NHPE H+IPIYYAS LAKKCMAVYQTY+ +MN++I Q +NPF FKHIS L S+D D+GP PG+ + D + V +GTLAK + SEP+E+ M Sbjct: 124 TETDLEESMDKIETINFHEVKEVAGIKFWCYHAGHVLGAAMFMIEIAGVKLLYTGDFSRQEDRHLMAAEIPNIKPDILIIESTYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPFVFKHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELF-ESWCTDKRNGVIIAGYCVEGTLAKHIMSEPEEITTM 377
BLAST of EY720904 vs. ExPASy Swiss-Prot
Match: CPSF3_BOVIN (Cleavage and polyadenylation specificity factor subunit 3 OS=Bos taurus GN=CPSF3 PE=2 SV=1) HSP 1 Score: 291.582 bits (745), Expect = 4.079e-78 Identity = 144/255 (56.47%), Postives = 179/255 (70.20%), Query Frame = 3 Query: 15 TRPDINRSMDRIEVLDFHQTVEVNGIKFWCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAELPQFSPDICIIESTYGVQLHQPRNIRERRFTDVIHSTISQGGRVLIPAYALGRAQELLLILDEYWSNHPEFHNIPIYYASPLAKKCMAVYQTYILSMNERIPHQFANSNPFKFKHISPLNSIDDLSDVGPFSGDGKPGVGTXWFV*TII*YLGALDTKMLVSYQVILSKGTLAKTLFSEPKEVPLM 779 T D+ SMD+IE ++FH+ EV GIKFWCY AGHVLGAAMFM++IAGV++LYTGD+SR+EDRHL AAE+P PDI IIESTYG +H+ R RE RF + +H +++GGR LIP +ALGRAQELLLILDEYW NHPE H+IPIYYAS LAKKCMAVYQTY+ +MN++I Q +NPF FKHIS L S+D D+GP PG+ + D + V +GTLAK + SEP+E+ M Sbjct: 124 TETDLEESMDKIETINFHEVKEVAGIKFWCYHAGHVLGAAMFMIEIAGVKLLYTGDFSRQEDRHLMAAEIPNIKPDILIIESTYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPFVFKHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELF-ESWCTDKRNGVIIAGYCVEGTLAKHIMSEPEEITTM 377
BLAST of EY720904 vs. ExPASy Swiss-Prot
Match: CPSF3_MOUSE (Cleavage and polyadenylation specificity factor subunit 3 OS=Mus musculus GN=Cpsf3 PE=1 SV=1) HSP 1 Score: 290.041 bits (741), Expect = 1.187e-77 Identity = 144/255 (56.47%), Postives = 178/255 (69.80%), Query Frame = 3 Query: 15 TRPDINRSMDRIEVLDFHQTVEVNGIKFWCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAELPQFSPDICIIESTYGVQLHQPRNIRERRFTDVIHSTISQGGRVLIPAYALGRAQELLLILDEYWSNHPEFHNIPIYYASPLAKKCMAVYQTYILSMNERIPHQFANSNPFKFKHISPLNSIDDLSDVGPFSGDGKPGVGTXWFV*TII*YLGALDTKMLVSYQVILSKGTLAKTLFSEPKEVPLM 779 T D+ SMD+IE ++FH+ EV GIKFWCY AGHVLGAAMFM++IAGV++LYTGD+SR+EDRHL AAE+P PDI IIESTYG +H+ R RE RF +H +++GGR LIP +ALGRAQELLLILDEYW NHPE H+IPIYYAS LAKKCMAVYQTY+ +MN++I Q +NPF FKHIS L S+D D+GP PG+ + D + V +GTLAK + SEP+E+ M Sbjct: 124 TETDLEESMDKIETINFHEVKEVAGIKFWCYHAGHVLGAAMFMIEIAGVKLLYTGDFSRQEDRHLMAAEIPNIKPDILIIESTYGTHIHEKREEREARFWHTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPFVFKHISNLKSMDHFDDIGPSVVMASPGMIQNGLSRELF-ESWCTDKRNGVIIAGYCVEGTLAKHIMSEPEEITTM 377
BLAST of EY720904 vs. ExPASy Swiss-Prot
Match: CPSF3_DICDI (Cleavage and polyadenylation specificity factor subunit 3 OS=Dictyostelium discoideum GN=cpsf3 PE=3 SV=1) HSP 1 Score: 260.381 bits (664), Expect = 1.007e-68 Identity = 130/251 (51.79%), Postives = 171/251 (68.13%), Query Frame = 3 Query: 18 RPDINRSMDRIEVLDFHQTVEVNGIKFWCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAELPQFSPDICIIESTYGVQLHQPRNIRERRFTDVIHSTISQGGRVLIPAYALGRAQELLLILDEYWSNHPEFHNIPIYYASPLAKKCMAVYQTYILSMNERIPHQFANSNPFKFKHISPLNSIDDLSDVGPFSGDGKPGVGTXWFV*TII*YLGALDTKMLVSYQVILSKGTLAKTLFSEPKEV 770 + D++RS+++IE + + Q VE NGIK C+ AGHVLGAAMFM++IAGV++LYTGD+SR+EDRHL AE P D+ IIESTYGVQ+H+PR RE+RFT +H + + G+ LIP +ALGRAQELLLILDEYW +P+ H++PIYYAS LAKKCM VY+TYI MN+R+ QF SNPF+FKHI + I+ D GP PG+ + D + + +GTLAK + SEP E+ Sbjct: 152 KSDLDRSLEKIEKVRYRQKVEHNGIKVTCFNAGHVLGAAMFMIEIAGVKILYTGDFSRQEDRHLMGAETPPVKVDVLIIESTYGVQVHEPRLEREKRFTSSVHQVVERNGKCLIPVFALGRAQELLLILDEYWIANPQLHHVPIYYASALAKKCMGVYRTYINMMNDRVRAQFDVSNPFEFKHIKNIKGIESFDDRGPCVFMASPGMLQSGLSRQLF-ERWCSDKRNGIVIPGYSVEGTLAKHIMSEPAEI 401
BLAST of EY720904 vs. ExPASy Swiss-Prot
Match: YSH1_YARLI (Endoribonuclease YSH1 OS=Yarrowia lipolytica GN=YSH1 PE=3 SV=2) HSP 1 Score: 257.299 bits (656), Expect = 8.524e-68 Identity = 128/254 (50.39%), Postives = 173/254 (68.11%), Query Frame = 3 Query: 24 DINRSMDRIEVLDFHQTVEVNGIKFWCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAELPQFSPDICIIESTYGVQLHQPRNIRERRFTDVIHSTISQGGRVLIPAYALGRAQELLLILDEYWSNHPEFHNIPIYYASPLAKKCMAVYQTYILSMNERIPHQFAN--SNPFKFKHISPLNSIDDLSDVGPFSGDGKPGVGTXWFV*TII*YLG--ALDTKMLVSYQVILSKGTLAKTLFSEPKEVP 773 D+ S ++IE +D+H T+EVNG+KF Y AGHVLGAAM+ +++ GV+VL+TGDYSREEDRHL AE+P PDI I ESTYG H PR RE+R T +IHST+ +GG+ L+P +ALGRAQE+LLILDEYW HP+ IYYAS LAKKC+AVYQTYI MN+ I +F + +NPF+FK+I + ++D D+GP PG+ +++ +T +L Y V +GT+AK + +EP E+P Sbjct: 153 DLTASFNKIETIDYHSTMEVNGVKFTAYHAGHVLGAAMYTIEVGGVKVLFTGDYSREEDRHLNQAEVPPMKPDILICESTYGTGTHLPRLEREQRLTGLIHSTLDKGGKCLLPVFALGRAQEILLILDEYWEAHPDLQEFSIYYASALAKKCIAVYQTYINMMNDNIRRRFRDQKTNPFRFKYIKNIKNLDRFDDMGPCVMVASPGMLQSGVSRSLLERWAPDPKNTLILTGYSV---EGTMAKQIINEPNEIP 403
BLAST of EY720904 vs. ExPASy Swiss-Prot
Match: YSH1_SCHPO (Endoribonuclease ysh1 OS=Schizosaccharomyces pombe GN=ysh1 PE=2 SV=1) HSP 1 Score: 254.988 bits (650), Expect = 4.231e-67 Identity = 128/251 (51.00%), Postives = 170/251 (67.73%), Query Frame = 3 Query: 24 DINRSMDRIEVLDFHQTVEVNGIKFWCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAELPQFSPDICIIESTYGVQLHQPRNIRERRFTDVIHSTISQGGRVLIPAYALGRAQELLLILDEYWSNHPEFHNIPIYYASPLAKKCMAVYQTYILSMNERIPHQFANSNPFKFKHISPLNSIDDLSDVGPFSGDGKPGVGTXWFV*TII*YLG--ALDTKMLVSYQVILSKGTLAKTLFSEPKEV 770 D+ + DRIE +D+H T+EV GIKF Y AGHVLGA M+ V++AGV +L+TGDYSREEDRHL AE+P PD+ I ESTYG HQPR +E R ++IHSTI GGRVL+P +ALGRAQELLLILDEYW+NH + ++PIYYAS LA+KCMA++QTY+ MN+ I FA NPF F+ + L +++ D+GP PG+ T++ +T +L Y V +GT+AK + +EP E+ Sbjct: 152 DLLAAFDRIEAVDYHSTIEVEGIKFTPYHAGHVLGACMYFVEMAGVNILFTGDYSREEDRHLHVAEVPPKRPDVLITESTYGTASHQPRLEKEARLLNIIHSTIRNGGRVLMPVFALGRAQELLLILDEYWNNHLDLRSVPIYYASSLARKCMAIFQTYVNMMNDNIRKIFAERNPFIFRFVKSLRNLEKFDDIGPSVILASPGMLQNGVSRTLLERWAPDPRNTLLLTGYSV---EGTMAKQITNEPIEI 399
BLAST of EY720904 vs. ExPASy Swiss-Prot
Match: YSH1_ASHGO (Endoribonuclease YSH1 OS=Ashbya gossypii GN=YSH1 PE=3 SV=1) HSP 1 Score: 254.988 bits (650), Expect = 4.231e-67 Identity = 131/258 (50.78%), Postives = 177/258 (68.60%), Query Frame = 3 Query: 15 TRPDINRSMDRIEVLDFHQTVEVNGIKFWCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAELPQFSPDICIIESTYGVQLHQPRNIRERRFTDVIHSTISQGGRVLIPAYALGRAQELLLILDEYWSNHPE---FHNIPIYYASPLAKKCMAVYQTYILSMNERIPHQFANS--NPFKFKHISPLNSIDDLSDVGPFSGDGKPGVGTXWFV*TII*YLGALDTKMLVSYQVILSKGTLAKTLFSEPKEVP 773 T D+ S DRIE +D+H T++VNGIKF Y AGHVLGAAMF V+IAG+R+L+TGDYSRE DRHL +AE+P DI I+EST+G H+PR +E++ T +IH+T+S+GGRVL+P +ALGRAQE++LILDEYWS H E +PI+YAS LA+KCM+V+QTY+ MN++I +F +S NPF FK+IS L ++D+ D GP PG+ ++ D K LV +GT+AK L EP+ +P Sbjct: 130 TDEDLAESFDRIETVDYHSTIDVNGIKFTAYHAGHVLGAAMFQVEIAGLRILFTGDYSRELDRHLNSAEIPTLPSDILIVESTFGTATHEPRTSKEKKLTQLIHTTVSKGGRVLLPVFALGRAQEIMLILDEYWSQHAEQLGNGQVPIFYASNLARKCMSVFQTYVNMMNDKIRKKFRDSQTNPFIFKNISYLKNLDEFQDFGPSVMLASPGMLQNGLSRDLL-EKWCPDEKNLVLITGYSVEGTMAKFLMLEPETIP 386
BLAST of EY720904 vs. ExPASy Swiss-Prot
Match: YSH1_KLULA (Endoribonuclease YSH1 OS=Kluyveromyces lactis GN=YSH1 PE=3 SV=1) HSP 1 Score: 254.603 bits (649), Expect = 5.525e-67 Identity = 133/255 (52.16%), Postives = 175/255 (68.63%), Query Frame = 3 Query: 24 DINRSMDRIEVLDFHQTVEVNGIKFWCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAELPQFSPDICIIESTYGVQLHQPRNIRERRFTDVIHSTISQGGRVLIPAYALGRAQELLLILDEYWSNHPE---FHNIPIYYASPLAKKCMAVYQTYILSMNERIPHQFANS--NPFKFKHISPLNSIDDLSDVGPFSGDGKPGVGTXWFV*TII*YLGALDTKMLVSYQVILSKGTLAKTLFSEPKEVP 773 D+ S DRIE +D+H T+EVNGIKF + AGHVLGAAMF ++IAGVRVL+TGDYSRE DRHL +AE+P S D+ I+EST+G H+PR RER+ T +IH+ +S+GGRVL+P +ALGRAQE++LILDEYW NH E +PI+YAS LAKKCM+V+QTY+ MN+ I +F +S NPF FK+IS L ++D+ D GP PG+ I+ + K LV +GT+AK L EP+ +P Sbjct: 136 DLAESFDRIETIDYHSTMEVNGIKFTAFHAGHVLGAAMFQIEIAGVRVLFTGDYSREVDRHLNSAEVPPQSSDVIIVESTFGTATHEPRQNRERKLTQLIHTVVSKGGRVLLPVFALGRAQEIMLILDEYWQNHKEELGNGQVPIFYASNLAKKCMSVFQTYVNMMNDDIRKKFKDSQTNPFIFKNISYLKNLDEFEDFGPSVMLASPGMLQNGLSRDIL-EKWCPEEKNLVLVTGYSVEGTMAKYLLLEPEAIP 389
BLAST of EY720904 vs. ExPASy Swiss-Prot
Match: YSH1_USTMA (Endoribonuclease YSH1 OS=Ustilago maydis GN=YSH1 PE=3 SV=1) HSP 1 Score: 247.284 bits (630), Expect = 8.821e-65 Identity = 127/247 (51.42%), Postives = 166/247 (67.21%), Query Frame = 3 Query: 36 SMDRIEVLDFHQTVEV-NGIKFWCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAELPQFSPDICIIESTYGVQLHQPRNIRERRFTDVIHSTISQGGRVLIPAYALGRAQELLLILDEYWSNHPEFHNIPIYYASPLAKKCMAVYQTYILSMNERIPHQF-ANSNPFKFKHISPLNSIDDLSDVGPFSGDGKPGVGTXWFV*TII*YLGALDTKMLVSYQVILSKGTLAKTLFSEPKEV 770 S +IE +DFHQ V + G++F Y AGHVLGA MF+++IAG+R+LYTGD+SREEDRHL AE+P PD+ I ESTYG Q H+PR +E RFT IH I +GGRVL+P + LGRAQELLL+LDEYW+ HPE H++PIYYAS LAKKC++VYQTYI +MN+ I +F NPF FKHIS L S++ D GP PG ++ A D + + +GT+A+ + +EP E+ Sbjct: 146 SWRQIEAVDFHQDVSIAGGLRFTSYHAGHVLGACMFLIEIAGLRILYTGDFSREEDRHLVQAEIPPVKPDVLICESTYGTQTHEPRLDKEHRFTSQIHHIIKRGGRVLLPVFVLGRAQELLLLLDEYWAAHPELHSVPIYYASALAKKCISVYQTYIHTMNDHIRTRFNRRDNPFVFKHISNLRSLEKFEDRGPCVMMASPGFMQSGVSRELL-ERWAPDKRNGLIVSGYSVEGTMARNILNEPDEI 391
BLAST of EY720904 vs. ExPASy Swiss-Prot
Match: YSH1_CANGA (Endoribonuclease YSH1 OS=Candida glabrata GN=YSH1 PE=3 SV=1) HSP 1 Score: 246.128 bits (627), Expect = 1.965e-64 Identity = 127/255 (49.80%), Postives = 174/255 (68.24%), Query Frame = 3 Query: 24 DINRSMDRIEVLDFHQTVEVNGIKFWCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAELPQFSPDICIIESTYGVQLHQPRNIRERRFTDVIHSTISQGGRVLIPAYALGRAQELLLILDEYWSNHPE---FHNIPIYYASPLAKKCMAVYQTYILSMNERIPHQFANS--NPFKFKHISPLNSIDDLSDVGPFSGDGKPGVGTXWFV*TII*YLGALDTKMLVSYQVILSKGTLAKTLFSEPKEVP 773 D+ S D+IE +D+H ++VNGIKF + AGHVLGAAMF ++IAG+RVL+TGDYSRE DRHL +AE+P DI I+EST+G H+PR RE++ T +IHST+++GGRVL+P +ALGRAQEL+LILDEYWS H E + IPI+YAS LA+KC++V+QTY+ MN+ I +F +S NPF FK+I+ + ++D+ D GP PG+ ++ D K LV +GT+AK L EP +P Sbjct: 131 DLIESFDKIETIDYHSMIDVNGIKFTAFHAGHVLGAAMFQIEIAGLRVLFTGDYSREIDRHLNSAEVPPLPSDILIVESTFGTATHEPRLHREKKLTQLIHSTVNKGGRVLMPVFALGRAQELMLILDEYWSQHKEELGSNQIPIFYASNLARKCLSVFQTYVNMMNDNIRKKFRDSQTNPFIFKNIAYIKNLDEFQDFGPSVMLASPGMLQNGLSRDLL-ERWCPDEKNLVLITGYSVEGTMAKYLLLEPDTIP 384 The following BLAST results are available for this feature:
BLAST of EY720904 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 40
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY720904 ID=EY720904; Name=EY720904; organism=Citrus sinensis; type=EST; length=891bpback to top |