EY720903
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY720903 vs. ExPASy Swiss-Prot
Match: PSD13_BOVIN (26S proteasome non-ATPase regulatory subunit 13 OS=Bos taurus GN=PSMD13 PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.929e-20 Identity = 55/156 (35.26%), Postives = 89/156 (57.05%), Query Frame = 1 Query: 133 YLESLRNDHPELGEWYNALADLYQKKLWHQLTLKLEQFVAHAVFQAGDALIQLYHNFITDFETKINLLKLAHFAVIVSRQYPEKQAAISYLEGVIEKLRATNEQRKEEPILYIKMQIAMFKLEQGDRKECKKLLEDGESTLDSMTDIDPSVYANYY 600 +L+ ++ P ++ L +LY KKLWHQLTL++ FV F GD LI+LY NFI++FE ++N L L + V RQ + A+S+LE EK++++ +E ++ K I KL GD + K+ +ED E L ++ + SV++ +Y Sbjct: 7 FLQQSQSSGPGQAAVWHRLEELYTKKLWHQLTLQVLDFVQDPCFAQGDGLIKLYENFISEFEHRVNPLSLVEIILHVVRQMTDPNVALSFLEKTREKVKSS-----DEAVILCKTAIGALKLNIGDLQVTKETIEDVEEMLSNLPGV-TSVHSRFY 156
BLAST of EY720903 vs. ExPASy Swiss-Prot
Match: PSD13_RAT (26S proteasome non-ATPase regulatory subunit 13 OS=Rattus norvegicus GN=Psmd13 PE=1 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.519e-20 Identity = 54/156 (34.62%), Postives = 90/156 (57.69%), Query Frame = 1 Query: 133 YLESLRNDHPELGEWYNALADLYQKKLWHQLTLKLEQFVAHAVFQAGDALIQLYHNFITDFETKINLLKLAHFAVIVSRQYPEKQAAISYLEGVIEKLRATNEQRKEEPILYIKMQIAMFKLEQGDRKECKKLLEDGESTLDSMTDIDPSVYANYY 600 +L+ ++ P ++ L +LY KKLWHQLTL++ FV F GD LI+LY NFI++FE ++N L L + V RQ + A+++LE EK++++ +E ++ K I KL GD + K+ +ED E L+++ + SV++ +Y Sbjct: 7 FLQQSQSSGPGQAAVWHRLEELYTKKLWHQLTLQVLDFVQDPCFAQGDGLIKLYENFISEFEHRVNPLSLVEIILHVVRQMTDPNVALTFLEKTREKVKSS-----DEAVILCKTAIGALKLNIGDLQATKETIEDVEEMLNNLPGV-TSVHSRFY 156
BLAST of EY720903 vs. ExPASy Swiss-Prot
Match: PSD13_MOUSE (26S proteasome non-ATPase regulatory subunit 13 OS=Mus musculus GN=Psmd13 PE=1 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.519e-20 Identity = 54/156 (34.62%), Postives = 90/156 (57.69%), Query Frame = 1 Query: 133 YLESLRNDHPELGEWYNALADLYQKKLWHQLTLKLEQFVAHAVFQAGDALIQLYHNFITDFETKINLLKLAHFAVIVSRQYPEKQAAISYLEGVIEKLRATNEQRKEEPILYIKMQIAMFKLEQGDRKECKKLLEDGESTLDSMTDIDPSVYANYY 600 +L+ ++ P ++ L +LY KKLWHQLTL++ FV F GD LI+LY NFI++FE ++N L L + V RQ + A+++LE EK++++ +E ++ K I KL GD + K+ +ED E L+++ + SV++ +Y Sbjct: 7 FLQQSQSSGPGQAAVWHRLEELYTKKLWHQLTLEVLDFVQDPCFAQGDGLIKLYENFISEFEHRVNPLSLVEIILHVVRQMTDPNVALTFLEKTREKVKSS-----DEAVILCKTAIGALKLNIGDLQATKETIEDVEEMLNNLPGV-TSVHSRFY 156
BLAST of EY720903 vs. ExPASy Swiss-Prot
Match: PSD13_DICDI (26S proteasome non-ATPase regulatory subunit 13 OS=Dictyostelium discoideum GN=psmD13 PE=2 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 2.775e-20 Identity = 49/161 (30.43%), Postives = 81/161 (50.31%), Query Frame = 1 Query: 127 LQYLESLRNDHPELGEWYNALADLYQKKLWHQLTLKLEQFVAHAVFQAGDALIQLYHNFITDFETKINLLKLAHFAVIVSRQYPEKQAAISYLEGVIEKLRATNEQRKEEPILYIKMQIAMFKLEQG---DRKECKKLLEDGESTLDSMTDIDPSVYANYY 600 L+YLE L+ P+L + N + D Y+ KLWHQLT ++E + L Y NFI DFE K+ L L + V+RQ+ ++ ++E + +K++ + + + IA L G ++CKK LE + L +T +D VY+++Y Sbjct: 7 LEYLEHLKKIVPDLSDQINNIKDTYENKLWHQLTKQIEMIIISPQLLEKKELFNFYTNFIRDFENKLRPLSLVEICIAVARQFDTDESR-KFIETISQKVK-----KDKSAYILTLSYIANMNLRSGVAEQLQDCKKTLELAKEELQGVTGLDTIVYSSFY 161 HSP 2 Score: 33.4982 bits (75), Expect = 2.775e-20 Identity = 15/33 (45.45%), Postives = 21/33 (63.64%), Query Frame = 2 Query: 605 VSSHYHKFHPECAEFYKCALLYLAYTSVGVSSQ 703 VS+ YH + +EFYK AL+YL+Y + SQ Sbjct: 163 VSTDYHMAKSQASEFYKNALMYLSYCKLETISQ 195
BLAST of EY720903 vs. ExPASy Swiss-Prot
Match: PSD13_HUMAN (26S proteasome non-ATPase regulatory subunit 13 OS=Homo sapiens GN=PSMD13 PE=1 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 5.612e-20 Identity = 54/156 (34.62%), Postives = 90/156 (57.69%), Query Frame = 1 Query: 133 YLESLRNDHPELGEWYNALADLYQKKLWHQLTLKLEQFVAHAVFQAGDALIQLYHNFITDFETKINLLKLAHFAVIVSRQYPEKQAAISYLEGVIEKLRATNEQRKEEPILYIKMQIAMFKLEQGDRKECKKLLEDGESTLDSMTDIDPSVYANYY 600 +L+ ++ P ++ L +LY KKLWHQLTL++ FV F GD LI+LY NFI++FE ++N L L + V RQ + A+++LE EK++++ +E ++ K I KL GD + K+ +ED E L+++ + SV++ +Y Sbjct: 7 FLQQSQSSGPGQPAVWHRLEELYTKKLWHQLTLQVLDFVQDPCFAQGDGLIKLYENFISEFEHRVNPLSLVEIILHVVRQMTDPNVALTFLEKTREKVKSS-----DEAVILCKTAIGALKLNIGDLQVTKETIEDVEEMLNNLPGV-TSVHSRFY 156
BLAST of EY720903 vs. ExPASy Swiss-Prot
Match: PSD13_CHICK (26S proteasome non-ATPase regulatory subunit 13 OS=Gallus gallus GN=PSMD13 PE=1 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.633e-19 Identity = 53/156 (33.97%), Postives = 90/156 (57.69%), Query Frame = 1 Query: 133 YLESLRNDHPELGEWYNALADLYQKKLWHQLTLKLEQFVAHAVFQAGDALIQLYHNFITDFETKINLLKLAHFAVIVSRQYPEKQAAISYLEGVIEKLRATNEQRKEEPILYIKMQIAMFKLEQGDRKECKKLLEDGESTLDSMTDIDPSVYANYY 600 +L+ ++ P ++ L +LY KKLWHQLTL++ FV F GD LI+LY NFI++FE ++N L L + V RQ + A+++LE EK++++ +E ++ K I KL GD + K+ +E+ E L+++ + SV++ +Y Sbjct: 7 FLQQSQSAGPGQAAVWHRLEELYNKKLWHQLTLQVLDFVQDPCFAQGDGLIKLYENFISEFEHRVNPLSLVEIILHVVRQMTDPTVALTFLEKTREKVKSS-----DEAVILCKTAIGALKLNIGDLQVTKETIEEVEEMLNNLPGV-TSVHSRFY 156 The following BLAST results are available for this feature:
BLAST of EY720903 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 6
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >EY720903 ID=EY720903; Name=EY720903; organism=Citrus sinensis; type=EST; length=801bpback to top |