EY720900

Overview
NameEY720900
Unique NameEY720900
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length850
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720900 vs. ExPASy Swiss-Prot
Match: NPL41_ARATH (NPL4-like protein 1 OS=Arabidopsis thaliana GN=At3g63000 PE=1 SV=1)

HSP 1 Score: 310.457 bits (794), Expect = 7.872e-84
Identity = 156/236 (66.10%), Postives = 195/236 (82.63%), Query Frame = 2
Query:  137 LLRIRSRDGLERVTVDGAHVTVAELKTIIQSQLRIPVESQTLSTNQNLLLAKSPSDLLQFTDMANPDRPLSSLNISHGSIVFLSYDGERNVRG-PSFNPAGSFGRKMTMDDLIAKQMRVTRQENPHCESVSFDRDCADAFQQYVNETLAXAVKRGGFMYGTVLEDNGVXVNFIYEPPQQGTEEVLYILRDEEEEKLXDAIAAGWGMXKVGVISHKR*CRNKR-YTLSXREGLQAGE 838
            +LR+RSRDGLERV+VDG H+TV++LKT+IQ QL+IP+ +QTLSTN+NLLLAKSPSD L FTDMA+P+  +SSLN++HGS+V+L+Y+GER +RG P+  PAGSFGRKMT++DLIA+QMRV RQE  HC+SVSFDRDCA+AFQ +VNE+LA AVKRGGFMYG V ED  V VNFIYEPPQQG E+ L ++RD EEEK  DAIA G GM +VG I ++   ++K+ YTLS  E L A +
Sbjct:    3 MLRVRSRDGLERVSVDGPHITVSQLKTLIQDQLQIPIHNQTLSTNRNLLLAKSPSDFLAFTDMADPNLRISSLNLAHGSMVYLAYEGERTIRGGPAVTPAGSFGRKMTVEDLIARQMRVGRQEKAHCDSVSFDRDCANAFQHFVNESLAFAVKRGGFMYGNVSEDGQVEVNFIYEPPQQGMEDNLILMRDSEEEKRVDAIALGLGMRRVGFIFNQTVTQDKKEYTLSNVEVLLAAQ 238          
BLAST of EY720900 vs. ExPASy Swiss-Prot
Match: NPL42_ARATH (NPL4-like protein 2 OS=Arabidopsis thaliana GN=At2g47970 PE=1 SV=1)

HSP 1 Score: 310.071 bits (793), Expect = 1.028e-83
Identity = 157/237 (66.24%), Postives = 194/237 (81.86%), Query Frame = 2
Query:  134 MLLRIRSRDGLERVTVDGAHVTVAELKTIIQSQLRIPVESQTLSTNQNLLLAKSPSDLLQFTDMANPDRPLSSLNISHGSIVFLSYDGERNVRG-PSFNPAGSFGRKMTMDDLIAKQMRVTRQENPHCESVSFDRDCADAFQQYVNETLAXAVKRGGFMYGTVLEDNGVXVNFIYEPPQQGTEEVLYILRDEEEEKLXDAIAAGWGMXKVGVISHKR*CRNK-RYTLSXREGLQAGE 838
            M+LRIRSRDGLERVT +GAH+TV++LKT+I  QL+IP+  QTLSTN++LLLAK+P+DLL FTD+ +P+ PLSSLN+ HGS+++L+YDGER++ G P   PAGSFGRKMT+DDLIA+QMRVTRQE  HC+SVSFDRD A+AFQ YVNE+LA AVKRGGFMYGTV E+  V V+FIYEPPQQGTE  L ++RD +EEK  DAIA G GM +VG I ++   ++K  YTLS  E LQA E
Sbjct:    2 MMLRIRSRDGLERVTAEGAHITVSQLKTLIADQLQIPLHKQTLSTNRDLLLAKTPADLLAFTDLTDPNLPLSSLNLGHGSMLYLAYDGERSIPGAPPVTPAGSFGRKMTVDDLIARQMRVTRQETSHCDSVSFDRDAANAFQHYVNESLAFAVKRGGFMYGTVTEEGQVEVDFIYEPPQQGTEANLILMRDADEEKRVDAIAMGLGMRRVGFIFNQTVVQDKTEYTLSNAEVLQAAE 238          
BLAST of EY720900 vs. ExPASy Swiss-Prot
Match: NPL4_ORYSJ (NPL4-like protein OS=Oryza sativa subsp. japonica GN=Os01g0377700 PE=2 SV=1)

HSP 1 Score: 208.764 bits (530), Expect = 3.226e-53
Identity = 125/245 (51.02%), Postives = 163/245 (66.53%), Query Frame = 2
Query:  134 MLLRIRSRDGLERVTV-DGAHVTVAELKTIIQSQLRIPVESQTLSTNQNLLLAKSPSDLLQFTDMANPDRPLSSLNISHGSIVFLSYDGERNVRGP----SFNPAGSFGRKMTMDDLIAKQMRVTRQENPHCESVSFDRDCADAFQQYVNETLAXAVKRGGFMYGTVLED-NGVXVNFIYEPPQQGTEEVLYILRDEEEEKLXDAIAAGWGMXKVGVISHKR*CRNK----RYTLSXREGLQAGE 838
            M+LRIRSRDG +R+TV D A  TV +L+ +I +++ +PV  Q LS +  LLL  S S  L    +A+P  PLSSL +S+GS V+LSY  +     P    + + AGSFG+KMTMDDLIA+Q+RVTRQE P C + SFDRD A+AFQ +V E+LA A KR GF+YG V  D   V V+FIYEPPQ GTE+V+ ++RD +EE   DAIA G GM +VG++  +   R       YT+S RE LQA E
Sbjct:    1 MILRIRSRDGTDRITVPDPAAATVGDLQRLIAARVTVPVPLQRLSLDPALLLPSSASAAL----LADPAAPLSSLRLSNGSFVYLSYPPDARSSQPPPPKALSAAGSFGKKMTMDDLIARQIRVTRQEAPLCAAASFDRDSANAFQLHVAESLAFATKRAGFLYGRVDADTKEVFVDFIYEPPQVGTEDVVQLMRDAQEEARVDAIAHGLGMRRVGLVFTQAVGRKTSDTGEYTMSNREVLQATE 241          
The following BLAST results are available for this feature:
BLAST of EY720900 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
NPL41_ARATH7.872e-8466.10NPL4-like protein 1 OS=Arabidopsis thaliana GN=At3... [more]
NPL42_ARATH1.028e-8366.24NPL4-like protein 2 OS=Arabidopsis thaliana GN=At2... [more]
NPL4_ORYSJ3.226e-5351.02NPL4-like protein OS=Oryza sativa subsp. japonica ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-703-015-G08-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720900 ID=EY720900; Name=EY720900; organism=Citrus sinensis; type=EST; length=850bp
CACGCGTCCGGTTTTGACCACGAAAGCAGCAATAATCCCACCGGAGGTAC
ACACCGACCCGAAATCACTACTTGTGCTGAAAGAAGCCTCGACCCCTGTT
ACCTCGATTCGAAACCCCAAAACCGCACCAAACATGCTGCTTCGCATCCG
CAGCAGAGACGGCCTCGAGCGCGTCACAGTCGACGGCGCACACGTCACAG
TCGCAGAACTGAAAACCATAATCCAATCGCAGCTCCGAATCCCCGTCGAA
AGCCAAACCCTATCCACTAACCAAAACCTCTTATTAGCCAAATCACCCTC
CGATCTCCTCCAATTCACCGACATGGCCAACCCAGACAGGCCCTTATCTT
CCCTCAACATCTCCCACGGCTCCATCGTTTTCTTATCCTACGACGGCGAG
CGAAACGTCAGGGGCCCCAGCTTCAACCCGGCCGGATCCTTCGGCCGGAA
GATGACCATGGACGATTTGATCGCCAAACAGATGCGGGTCACCCGCCAGG
AGAATCCGCATTGCGAGTCCGTCTCCTTTGATCGTGACTGCGCCGACGCC
TTTCAGCAGTACGTCAATGAAACGCTGGCGTNTGCCGTCAAACGCGGAGG
GTTCATGTACGGCACTGTCTTGGAGGATAACGGGGTANAGGTGAATTTCA
TCTACGAGCCGCCTCAGCAGGGGACGGAGGAAGTGCTGTATATTTTACGT
GACGAGGAGGAGGAGAAGTTANTGGACGCGATTGCGGCTGGATGGGGTAT
GAANAAAGTGGGGGTTATTTCACACAAACGATAATGCAGAAACAAAAGAT
ATACTTTATCCNACAGGGAGGGTTTGCAAGCGGGTGAATTCACGCGGAGT
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