EY720891

Overview
NameEY720891
Unique NameEY720891
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length234
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY720891 vs. ExPASy Swiss-Prot
Match: RTN_ECOLI (Protein rtn OS=Escherichia coli (strain K12) GN=rtn PE=4 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 6.603e-15
Identity = 38/72 (52.78%), Postives = 50/72 (69.44%), Query Frame = 3 
Query:    3 IDKGFVQAIEPGGEETPVLDVIITLSHRLGLAVVAEGVEMPEQFTYLTARGVAFIQGYLFARPMRSADFVRW 218
            ID+GF+ AI      +PVLD ++TL+ RL +  VAEGVE PEQ  +L+ RGV F+QGY  +RP+   DFVRW
Sbjct:  438 IDRGFINAIGTETITSPVLDAVLTLAKRLNMLTVAEGVETPEQARWLSERGVNFMQGYWISRPLPLDDFVRW 509
[Close]
BLAST of EY720891 vs. ExPASy Swiss-Prot
Match: YOAD_ECOLI (Uncharacterized protein yoaD OS=Escherichia coli (strain K12) GN=yoaD PE=1 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 2.348e-12
Identity = 36/74 (48.65%), Postives = 44/74 (59.46%), Query Frame = 3 
Query:    3 IDKGFVQAIEPGGEETPVLDVIITLSHRLGLAVVAEGVEMPEQFTYLTARGVAFIQGYLFARPMRSADFVRWYA 224
            IDK F  AI      + V D+II L  RL + +VAEGVE  EQ  YL   GV  +QGYL+A+PM   DF +W A
Sbjct:  439 IDKSFTAAIGSDAVNSTVTDIIIALGQRLNIELVAEGVETQEQAKYLRRHGVHILQGYLYAQPMPLRDFPKWLA 512
The following BLAST results are available for this feature:
BLAST of EY720891 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
RTN_ECOLI6.603e-1552.78Protein rtn OS=Escherichia coli (strain K12) GN=rt... [more]
YOAD_ECOLI2.348e-1248.65Uncharacterized protein yoaD OS=Escherichia coli (... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-703-015-F11-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720891 ID=EY720891; Name=EY720891; organism=Citrus sinensis; type=EST; length=234bp
AGATCGACAAGGGGTTCGTGCAGGCCATCGAGCCCGGCGGCGAGGAAACG
CCCGTGCTCGACGTGATCATCACGCTGTCGCACCGGCTGGGCCTGGCCGT
GGTGGCCGAGGGCGTCGAGATGCCGGAGCAGTTCACCTACCTGACGGCGC
GCGGCGTGGCCTTCATCCAGGGCTACCTGTTCGCGCGGCCGATGCGTTCG
GCCGACTTTGTCCGCTGGTATGCCGAGAACGCGG
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