EY720874

Overview
NameEY720874
Unique NameEY720874
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length742
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720874 vs. ExPASy Swiss-Prot
Match: UBC13_ARATH (Ubiquitin-conjugating enzyme E2 13 OS=Arabidopsis thaliana GN=UBC13 PE=2 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.096e-27
Identity = 59/89 (66.29%), Postives = 64/89 (71.91%), Query Frame = 1
Query:   88 DLCKNPVAGFSAGLVDENNIFEWSVTXIGPXDTLYEGGXFXAIMSFPXNYPNTHLPLNLHQRFGHPNVYPDWRVWIINPYPPSDEPQWY 354
            DLCK+PV GFSAGLVDE NIFEWSVT IGP DTLYEGG F AIMSFP NYPN+   +       HPNVYPD RV I   +PP D+P  Y
Sbjct:   15 DLCKHPVDGFSAGLVDEKNIFEWSVTIIGPPDTLYEGGFFYAIMSFPQNYPNSPPTVRFTSDIWHPNVYPDGRVCISILHPPGDDPSGY 103          
BLAST of EY720874 vs. ExPASy Swiss-Prot
Match: UBC7_ARATH (Ubiquitin-conjugating enzyme E2 7 OS=Arabidopsis thaliana GN=UBC7 PE=2 SV=1)

HSP 1 Score: 119.398 bits (298), Expect = 2.067e-26
Identity = 57/89 (64.04%), Postives = 63/89 (70.79%), Query Frame = 1
Query:   88 DLCKNPVAGFSAGLVDENNIFEWSVTXIGPXDTLYEGGXFXAIMSFPXNYPNTHLPLNLHQRFGHPNVYPDWRVWIINPYPPSDEPQWY 354
            DLCK+PV GFSAGLVDE NIFEWSVT IGP DTLYEGG F AIM+FP NYPN+   +       HPNVY D RV I   +PP D+P  Y
Sbjct:   15 DLCKHPVDGFSAGLVDEKNIFEWSVTIIGPPDTLYEGGFFNAIMTFPQNYPNSPPTVRFTSDMWHPNVYSDGRVCISILHPPGDDPSGY 103          
BLAST of EY720874 vs. ExPASy Swiss-Prot
Match: UBC14_ARATH (Ubiquitin-conjugating enzyme E2 14 OS=Arabidopsis thaliana GN=UBC14 PE=2 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.300e-24
Identity = 52/89 (58.43%), Postives = 61/89 (68.54%), Query Frame = 1
Query:   88 DLCKNPVAGFSAGLVDENNIFEWSVTXIGPXDTLYEGGXFXAIMSFPXNYPNTHLPLNLHQRFGHPNVYPDWRVWIINPYPPSDEPQWY 354
            DLCK PV GFSAGLVDE N+F+WSV+ +GP DTLYEGG F AIMSFP NYP +   +       HPNVY D +V I   +PP D+P  Y
Sbjct:   16 DLCKKPVDGFSAGLVDEKNVFQWSVSIMGPPDTLYEGGFFNAIMSFPENYPVSPPTVTFTSEMWHPNVYSDGKVCISILHPPGDDPHGY 104          
BLAST of EY720874 vs. ExPASy Swiss-Prot
Match: UBC7_WHEAT (Ubiquitin-conjugating enzyme E2 7 OS=Triticum aestivum GN=UBC7 PE=2 SV=1)

HSP 1 Score: 100.523 bits (249), Expect = 1.427e-22
Identity = 46/84 (54.76%), Postives = 56/84 (66.67%), Query Frame = 1
Query:  103 PVAGFSAGLVDENNIFEWSVTXIGPXDTLYEGGXFXAIMSFPXNYPNTHLPLNLHQRFGHPNVYPDWRVWIINPYPPSDEPQWY 354
            P  GF  G VD++N+FEW VT IGP +TLY+GG F AIMSFP NYPN+   +       HPNVYPD RV  I+ +PP D+P  Y
Sbjct:   23 PSMGFQLGFVDDSNVFEWQVTIIGPPETLYDGGYFNAIMSFPQNYPNSPPTVRFTSEMWHPNVYPDGRV-CISIHPPGDDPNGY 105          

HSP 2 Score: 27.335 bits (59), Expect = 1.427e-22
Identity = 15/43 (34.88%), Postives = 19/43 (44.19%), Query Frame = 2
Query:  329 PPVTNLNGISLAHERRDPLHTGEKYPFEYYIKASRAHKKLPPN 457
            PP  + NG  LA ER  P+HT E          S  + + P N
Sbjct:   97 PPGDDPNGYELASERWTPVHTVESIVLSIISMLSSPNDESPAN 139          
BLAST of EY720874 vs. ExPASy Swiss-Prot
Match: UBC15_SCHPO (Ubiquitin-conjugating enzyme E2 15 OS=Schizosaccharomyces pombe GN=ubc15 PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.028e-17
Identity = 43/89 (48.31%), Postives = 54/89 (60.67%), Query Frame = 1
Query:   88 DLCKNPVAGFSAGLVDENNIFEWSVTXIGPXDTLYEGGXFXAIMSFPXNYPNTHLPLNLHQRFGHPNVYPDWRVWIINPYPPSDEPQWY 354
            ++ KNP  GFS GLVD+ +IFEW V  IGP DTLYEGG F A +SFP +YP     +       HPNV+P+  V I   +PP D+   Y
Sbjct:   16 EIQKNPPQGFSVGLVDDKSIFEWEVMIIGPEDTLYEGGFFHATLSFPQDYPLMPPKMKFTTEIWHPNVHPNGEVCISILHPPGDDKYGY 104          
BLAST of EY720874 vs. ExPASy Swiss-Prot
Match: UBC7_CAEEL (Probable ubiquitin-conjugating enzyme E2 7 OS=Caenorhabditis elegans GN=ubc-7 PE=1 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.257e-15
Identity = 40/89 (44.94%), Postives = 53/89 (59.55%), Query Frame = 1
Query:   88 DLCKNPVAGFSAGLVDENNIFEWSVTXIGPXDTLYEGGXFXAIMSFPXNYPNTHLPLNLHQRFGHPNVYPDWRVWIINPYPPSDEPQWY 354
            D+ + PV GFSAGLVD+N+I++W V  IGP DTLYEGG F AI+ FP +YP     +       HPN+  +  V I   + P D+   Y
Sbjct:   14 DMRRVPVDGFSAGLVDDNDIYKWEVLVIGPPDTLYEGGFFKAILDFPRDYPQKPPKMKFISEIWHPNIDKEGNVCISILHDPGDDKWGY 102          
BLAST of EY720874 vs. ExPASy Swiss-Prot
Match: UB2G1_RAT (Ubiquitin-conjugating enzyme E2 G1 OS=Rattus norvegicus GN=Ube2g1 PE=2 SV=3)

HSP 1 Score: 80.4925 bits (197), Expect = 1.064e-14
Identity = 39/89 (43.82%), Postives = 53/89 (59.55%), Query Frame = 1
Query:   88 DLCKNPVAGFSAGLVDENNIFEWSVTXIGPXDTLYEGGXFXAIMSFPXNYPNTHLPLNLHQRFGHPNVYPDWRVWIINPYPPSDEPQWY 354
            +L KNPV GFSAGL+D+N+++ W V  IGP DTLYEGG F A ++FP +YP     +       HPNV  +  V I   + P ++   Y
Sbjct:   16 ELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGY 104          
BLAST of EY720874 vs. ExPASy Swiss-Prot
Match: UB2G1_MOUSE (Ubiquitin-conjugating enzyme E2 G1 OS=Mus musculus GN=Ube2g1 PE=2 SV=3)

HSP 1 Score: 80.4925 bits (197), Expect = 1.064e-14
Identity = 39/89 (43.82%), Postives = 53/89 (59.55%), Query Frame = 1
Query:   88 DLCKNPVAGFSAGLVDENNIFEWSVTXIGPXDTLYEGGXFXAIMSFPXNYPNTHLPLNLHQRFGHPNVYPDWRVWIINPYPPSDEPQWY 354
            +L KNPV GFSAGL+D+N+++ W V  IGP DTLYEGG F A ++FP +YP     +       HPNV  +  V I   + P ++   Y
Sbjct:   16 ELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGY 104          
BLAST of EY720874 vs. ExPASy Swiss-Prot
Match: UB2G1_MACFA (Ubiquitin-conjugating enzyme E2 G1 OS=Macaca fascicularis GN=UBE2G1 PE=2 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.064e-14
Identity = 39/89 (43.82%), Postives = 53/89 (59.55%), Query Frame = 1
Query:   88 DLCKNPVAGFSAGLVDENNIFEWSVTXIGPXDTLYEGGXFXAIMSFPXNYPNTHLPLNLHQRFGHPNVYPDWRVWIINPYPPSDEPQWY 354
            +L KNPV GFSAGL+D+N+++ W V  IGP DTLYEGG F A ++FP +YP     +       HPNV  +  V I   + P ++   Y
Sbjct:   16 ELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGY 104          
BLAST of EY720874 vs. ExPASy Swiss-Prot
Match: UB2G1_HUMAN (Ubiquitin-conjugating enzyme E2 G1 OS=Homo sapiens GN=UBE2G1 PE=1 SV=3)

HSP 1 Score: 80.4925 bits (197), Expect = 1.064e-14
Identity = 39/89 (43.82%), Postives = 53/89 (59.55%), Query Frame = 1
Query:   88 DLCKNPVAGFSAGLVDENNIFEWSVTXIGPXDTLYEGGXFXAIMSFPXNYPNTHLPLNLHQRFGHPNVYPDWRVWIINPYPPSDEPQWY 354
            +L KNPV GFSAGL+D+N+++ W V  IGP DTLYEGG F A ++FP +YP     +       HPNV  +  V I   + P ++   Y
Sbjct:   16 ELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGY 104          
The following BLAST results are available for this feature:
BLAST of EY720874 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
UBC13_ARATH1.096e-2766.29Ubiquitin-conjugating enzyme E2 13 OS=Arabidopsis ... [more]
UBC7_ARATH2.067e-2664.04Ubiquitin-conjugating enzyme E2 7 OS=Arabidopsis t... [more]
UBC14_ARATH3.300e-2458.43Ubiquitin-conjugating enzyme E2 14 OS=Arabidopsis ... [more]
UBC7_WHEAT1.427e-2254.76Ubiquitin-conjugating enzyme E2 7 OS=Triticum aest... [more]
UBC15_SCHPO1.028e-1748.31Ubiquitin-conjugating enzyme E2 15 OS=Schizosaccha... [more]
UBC7_CAEEL1.257e-1544.94Probable ubiquitin-conjugating enzyme E2 7 OS=Caen... [more]
UB2G1_RAT1.064e-1443.82Ubiquitin-conjugating enzyme E2 G1 OS=Rattus norve... [more]
UB2G1_MOUSE1.064e-1443.82Ubiquitin-conjugating enzyme E2 G1 OS=Mus musculus... [more]
UB2G1_MACFA1.064e-1443.82Ubiquitin-conjugating enzyme E2 G1 OS=Macaca fasci... [more]
UB2G1_HUMAN1.064e-1443.82Ubiquitin-conjugating enzyme E2 G1 OS=Homo sapiens... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-015-E05-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720874 ID=EY720874; Name=EY720874; organism=Citrus sinensis; type=EST; length=742bp
CACGCGTCCGGCCAATTCCAGCTCTCTCTCTCTACTAAAATCATGGCGGC
ATCTCAGGCAAGTCTCCTCTTGCAAAAACAACTAAAAGATCTTTGTAAGA
ACCCTGTTGCTGGGTTTTCTGCCGGGTTGGTGGATGAGAACAATATCTTT
GAATGGAGTGTTACANTNATTGGACCANCTGATACTCTTTATGAAGGGGG
ANTTTTCANTGCCATTATGAGCTTTCCATNCAACTACCCTAATACCCACC
TACCGTTGAATTTACACCAGAGATTTGGGCATCCTAATGTCTATCCGGAT
TGGCGTGTCTGGATAATCAATCCCTATCCCCCCAGTGACGAACCTCAATG
GTATTAGCCTTGCACATGAACGCCGGGATCCCCTTCATACTGGTGAAAAA
TATCCTTTTGAGTATTATATTAAAGCGTCCCGGGCCCATAAGAAACTCCC
CCCAAATTTTACCCCGCAAAATGGGAAAAACGGGAAATTACTCCCAAAAA
AATTAGCCCCGGTTTAAAAATCCCCAAAATTGTTTTCCCACTGCGGGGCC
CCTTTTTCCCAACCATATTTTTTACCGGGAAAATTTTTTTTAATATTTGG
GGGGAGAAAGGGTCCTGGGGGAAATACAAAAGGCCGGGCCTTTTGTAAAG
GCGGTTTTAAAATTTTCCCCCAACCCCCCCCCCTGTTTCCCCGGGGGGGA
CACCCTGTTGAAAAGGGGGAAACCCCCTCTTTTTTTTCAAAC
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