FE659089

Overview
NameFE659089
Unique NameFE659089
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length295
Libraries
Library NameType
Hong Anliu sweet orange SSH librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6956 contig Csv1_Contig6956:1175..1469. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of FE659089 vs. ExPASy Swiss-Prot
Match: DHAR1_ARATH (Glutathione S-transferase DHAR1, mitochondrial OS=Arabidopsis thaliana GN=DHAR1 PE=1 SV=1)

HSP 1 Score: 145.976 bits (367), Expect = 5.757e-35
Identity = 71/98 (72.45%), Postives = 81/98 (82.65%), Query Frame = 2 
Query:    2 PVVKFDDKWVADSDVIVRIIEEKYPEPSLTNPPEFASVGSKIFPSFVNFLKSKDPNDGTEQALLEELKALDEHLKTHGGPFIAGEKVTAVDLSLVPKL 295
            PV+K DDKWV DSDVIV I+EEKYP+P L  P EFASVGS IF +F  FLKSKD NDG+E ALL EL+AL+ HLK+H GPFIAGE+V+AVDLSL PKL
Sbjct:   61 PVLKIDDKWVTDSDVIVGILEEKYPDPPLKTPAEFASVGSNIFGTFGTFLKSKDSNDGSEHALLVELEALENHLKSHDGPFIAGERVSAVDLSLAPKL 158
The following BLAST results are available for this feature:
BLAST of FE659089 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
DHAR1_ARATH5.757e-3572.45Glutathione S-transferase DHAR1, mitochondrial OS=... [more]
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Properties
Property NameValue
Genbank descriptionC28 Hong Anliu sweet orange SSH library Citrus sinensis cDNA 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FE659089 ID=FE659089; Name=FE659089; organism=Citrus sinensis; type=EST; length=295bp
ACCTGTGGTAAAGTTTGATGACAAGTGGGTGGCTGACTCTGATGTGATTG
TTAGAATTATTGAGGAGAAGTATCCTGAGCCTTCTCTTACTAATCCTCCT
GAATTTGCCTCTGTTGGATCAAAGATATTCCCATCTTTTGTCAATTTCTT
GAAGAGCAAGGACCCAAATGATGGGACAGAGCAAGCTTTGCTGGAGGAAT
TGAAAGCATTGGATGAGCATCTTAAGACTCATGGAGGTCCATTCATTGCT
GGAGAGAAGGTCACTGCTGTAGATTTGAGCTTGGTACCAAAGCTG
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