EY720850
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY720850 vs. ExPASy Swiss-Prot
Match: MTR4_CAEEL (mRNA transport homolog 4 OS=Caenorhabditis elegans GN=mtr-4 PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 8.158e-19 Identity = 53/113 (46.90%), Postives = 70/113 (61.95%), Query Frame = 1 Query: 1 VKVVFATETLAAGINMPARTAVLSSLSKRTASGRIQLTSNELFQMAGRAGRRGIDNRGHVVLVQTPYEGAEECCKLLFAGVEPLVSQFTASYGMVLNLL--AGAKVMHLSNES 333 VKV+FATET + G+NMPART V +S K S +TS E QMAGRAGRRG D+RG V+L+ A++ +++ +PL SQF +Y MVLNL+ G V + N S Sbjct: 463 VKVLFATETFSMGLNMPARTVVFTSARKFDGSDNRYITSGEYIQMAGRAGRRGKDDRGTVILMVDSAMSADDAKQIIKGATDPLNSQFRLTYNMVLNLMRVEGMAVSWIINNS 575
BLAST of EY720850 vs. ExPASy Swiss-Prot
Match: HELY_MYCLE (Probable helicase helY OS=Mycobacterium leprae GN=helY PE=3 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.624e-17 Identity = 52/102 (50.98%), Postives = 58/102 (56.86%), Query Frame = 1 Query: 1 VKVVFATETLAAGINMPARTAVLSSLSKRTASGRIQLTSNELFQMAGRAGRRGIDNRGHVVLVQTPYE---GAEECCKLLFAGVEPLVSQFTASYGMVLNLL 297 VK VFATETLA GINMPART VL L K + LT E Q+ GRAGRRGID GH V++ P E G L A PL S F SY M +NL+ Sbjct: 367 VKAVFATETLALGINMPARTVVLERLVKFNGKQHVPLTPGEYTQLTGRAGRRGIDVEGHAVVIWHPSEDTSGPSAVAGLASARTFPLRSSFVPSYNMTINLV 468
BLAST of EY720850 vs. ExPASy Swiss-Prot
Match: HELY_MYCTU (Probable helicase helY OS=Mycobacterium tuberculosis GN=helY PE=3 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 4.476e-17 Identity = 50/99 (50.51%), Postives = 56/99 (56.57%), Query Frame = 1 Query: 1 VKVVFATETLAAGINMPARTAVLSSLSKRTASGRIQLTSNELFQMAGRAGRRGIDNRGHVVLVQTPYEGAEECCKLLFAGVEPLVSQFTASYGMVLNLL 297 VK VFATETLA GINMPART VL L K + LT E Q+ GRAGRRGID GH V++ P E L PL S F SY M +NL+ Sbjct: 364 VKAVFATETLALGINMPARTVVLERLVKFNGEQHMPLTPGEYTQLTGRAGRRGIDVEGHAVVIWHPEIEPSEVAGLASTRTFPLRSSFAPSYNMTINLV 462
BLAST of EY720850 vs. ExPASy Swiss-Prot
Match: SKI2_YEAST (Antiviral helicase SKI2 OS=Saccharomyces cerevisiae GN=SKI2 PE=1 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 1.881e-15 Identity = 46/100 (46.00%), Postives = 63/100 (63.00%), Query Frame = 1 Query: 1 VKVVFATETLAAGINMPARTAVLSSLSKRTASGRIQLTSNELFQMAGRAGRRGIDNRGHVVLVQTPYEGAEECCKLLFAGVEP-LVSQFTASYGMVLNLL 297 +KV+FATET A G+N+P RT + SS+ K +G +LT E QMAGRAGRRG+D+ G V+++ + K + GV L SQF +Y M+LNLL Sbjct: 716 IKVLFATETFAMGLNLPTRTVIFSSIRKHDGNGLRELTPGEFTQMAGRAGRRGLDSTGTVIVMAYNSPLSIATFKEVTMGVPTRLQSQFRLTYNMILNLL 815
BLAST of EY720850 vs. ExPASy Swiss-Prot
Match: YE02_SCHPO (Uncharacterized helicase C17H9.02 OS=Schizosaccharomyces pombe GN=SPAC17H9.02 PE=1 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 9.334e-15 Identity = 47/101 (46.53%), Postives = 64/101 (63.37%), Query Frame = 1 Query: 1 VKVVFATETLAAGINMPARTAVLSSLSKRTASGRIQLTSNELFQMAGRAGRRGIDNRG--HVVLVQTPYEGAEECCKLLFAGVEPLVSQFTASYGMVLNLL 297 V+++FATET + G+NMPART + + K + + LTS E QM+GRAGRRGID +G V+L Q+ E A C L+ + L S F SYGM+LNL+ Sbjct: 460 VRILFATETFSIGLNMPARTVLFTKAQKFSGNNFRWLTSGEYMQMSGRAGRRGIDTKGLSIVILDQSIDEQAARC--LMNGQADVLNSAFHLSYGMILNLM 558
BLAST of EY720850 vs. ExPASy Swiss-Prot
Match: SK2L2_MOUSE (Superkiller viralicidic activity 2-like 2 OS=Mus musculus GN=Skiv2l2 PE=2 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 9.334e-15 Identity = 45/99 (45.45%), Postives = 60/99 (60.61%), Query Frame = 1 Query: 1 VKVVFATETLAAGINMPARTAVLSSLSKRTASGRIQLTSNELFQMAGRAGRRGIDNRGHVVLVQTPYEGAEECCKLLFAGVEPLVSQFTASYGMVLNLL 297 +K +FATET A GINMPART + ++ K ++S E QM+GRAGRRG+D+RG V+L+ +LL +PL S F +Y MVLNLL Sbjct: 474 IKALFATETFAMGINMPARTVLFTNARKYDGKDFRWISSGEYIQMSGRAGRRGMDDRGIVILMVDEKMSPTIGKQLLKGSADPLNSAFHLTYNMVLNLL 572
BLAST of EY720850 vs. ExPASy Swiss-Prot
Match: SK2L2_HUMAN (Superkiller viralicidic activity 2-like 2 OS=Homo sapiens GN=SKIV2L2 PE=1 SV=3) HSP 1 Score: 80.4925 bits (197), Expect = 1.219e-14 Identity = 45/99 (45.45%), Postives = 60/99 (60.61%), Query Frame = 1 Query: 1 VKVVFATETLAAGINMPARTAVLSSLSKRTASGRIQLTSNELFQMAGRAGRRGIDNRGHVVLVQTPYEGAEECCKLLFAGVEPLVSQFTASYGMVLNLL 297 +K +FATET A GINMPART + ++ K ++S E QM+GRAGRRG+D+RG V+L+ +LL +PL S F +Y MVLNLL Sbjct: 476 IKALFATETFAMGINMPARTVLFTNARKFDGKDFRWISSGEYIQMSGRAGRRGMDDRGIVILMVDEKMSPTIGKQLLKGSADPLNSAFHLTYNMVLNLL 574
BLAST of EY720850 vs. ExPASy Swiss-Prot
Match: SKIV2_HUMAN (Helicase SKI2W OS=Homo sapiens GN=SKIV2L PE=1 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 2.716e-14 Identity = 46/100 (46.00%), Postives = 59/100 (59.00%), Query Frame = 1 Query: 1 VKVVFATETLAAGINMPARTAVLSSLSKRTASGRIQLTSNELFQMAGRAGRRGIDNRGHVVLV-QTPYEGAEECCKLLFAGVEPLVSQFTASYGMVLNLL 297 VKV+FATET A G+NMPART V S+ K S L E QMAGRAGRRG+D G V+L+ + + +++ L SQF +Y M+LNLL Sbjct: 656 VKVLFATETFAMGVNMPARTVVFDSMRKHDGSTFRDLLPGEYVQMAGRAGRRGLDPTGTVILLCKGRVPEMADLHRMMMGKPSQLQSQFRLTYTMILNLL 755
BLAST of EY720850 vs. ExPASy Swiss-Prot
Match: YJV3_SCHPO (Uncharacterized helicase C550.03c OS=Schizosaccharomyces pombe GN=SPCC550.03c PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 5.488e-13 Identity = 40/100 (40.00%), Postives = 56/100 (56.00%), Query Frame = 1 Query: 1 VKVVFATETLAAGINMPARTAVLSSLSKRTASGRIQLTSNELFQMAGRAGRRGIDNRGHVVLV-QTPYEGAEECCKLLFAGVEPLVSQFTASYGMVLNLL 297 VKV+FATET A G+NMPA++ V S K L E Q +GRAGRRG+D G V+++ ++ ++ L+SQF +Y M+LNLL Sbjct: 640 VKVLFATETFAMGVNMPAKSVVFSGTQKHDGRNFRDLLPGEYTQCSGRAGRRGLDVTGTVIILSRSELPDTASLRHMIMGPSSKLISQFRLTYNMILNLL 739 HSP 2 Score: 22.7126 bits (47), Expect = 5.488e-13 Identity = 10/56 (17.86%), Postives = 29/56 (51.79%), Query Frame = 2 Query: 386 LVEQSVGNYVGSNVMLAAKDELGKIQKEIDVLTSQISDDAIDRESMRLLSEGAYKE 553 ++++S V ++ ++++ ++++ L ++SD + LLS ++KE Sbjct: 749 MIKRSFSENVNQTLVPQHEEKIKSFEEKLSALKKEMSDVDLKEIKSCLLSSESFKE 804
BLAST of EY720850 vs. ExPASy Swiss-Prot
Match: YDVG_SCHPO (Uncharacterized helicase C6F12.16c OS=Schizosaccharomyces pombe GN=SPAC6F12.16c PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 6.689e-13 Identity = 41/99 (41.41%), Postives = 59/99 (59.60%), Query Frame = 1 Query: 1 VKVVFATETLAAGINMPARTAVLSSLSKRTASGRIQLTSNELFQMAGRAGRRGIDNRGHVVLVQTPYEGAEECCKLLFAGVEPLVSQFTASYGMVLNLL 297 +KV+FATET + G+NMPA+T V +++ K ++ E QM+GRAGRRG+D+RG V+L+ +L + L S F SY M+LNLL Sbjct: 544 LKVLFATETFSIGLNMPAKTVVFTNVRKFDGKTFRWISGGEYIQMSGRAGRRGLDDRGIVILMIDEKMDPPVAKSMLKGEADRLDSAFHLSYNMILNLL 642 The following BLAST results are available for this feature:
BLAST of EY720850 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
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Sequences
The
following sequences are available for this feature:
EST sequence >EY720850 ID=EY720850; Name=EY720850; organism=Citrus sinensis; type=EST; length=804bpback to top |