EY720838

Overview
NameEY720838
Unique NameEY720838
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length898
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720838 vs. ExPASy Swiss-Prot
Match: CH60A_ARATH (Chaperonin CPN60, mitochondrial OS=Arabidopsis thaliana GN=CPN60 PE=1 SV=2)

HSP 1 Score: 104.375 bits (259), Expect = 1.082e-26
Identity = 62/135 (45.93%), Postives = 89/135 (65.93%), Query Frame = 3
Query:  237 AQPITSFEQIALFGTAAANGDRVIGELIAKAFEKGWGNNLHVLAARKTPPSIELQLYWGMTLDRGYLSPYFITNHKTKECVLRDPYIMILEKKVSNCVFFDLLTEIGPVRRYNGTDVLIIAEDIENDLPSSLVLN 641
            A+ I++ E+IA  GT +ANG+R IGELIAKA EK     +  +   KT  + EL++  GM LDRGY SPYFITN KT++C L DP I+I EKK+S+      + E+   R+     +LI++ED+E+D  ++L+LN
Sbjct:  165 ARMISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIQDGKTLFN-ELEVVEGMKLDRGYTSPYFITNQKTQKCELDDPLILIHEKKISSINSIVKVLELALKRQ---RPLLIVSEDVESDALATLILN 295          

HSP 2 Score: 29.261 bits (64), Expect = 1.082e-26
Identity = 12/22 (54.55%), Postives = 15/22 (68.18%), Query Frame = 1
Query:  661 KACVIKPPXIGESXKAXLRDIA 726
            K C IK P  GE+ KA L+D+A
Sbjct:  302 KVCAIKAPGFGENRKANLQDLA 323          

HSP 3 Score: 24.6386 bits (52), Expect = 1.082e-26
Identity = 12/24 (50.00%), Postives = 15/24 (62.50%), Query Frame = 2
Query:  182 DQRQGARMAIDALVGNLYSTTHHI 253
            D R+G  MA+DA+V NL S    I
Sbjct:  145 DLRRGISMAVDAVVTNLKSKARMI 168          

HSP 4 Score: 23.0978 bits (48), Expect = 1.082e-26
Identity = 13/25 (52.00%), Postives = 16/25 (64.00%), Query Frame = 2
Query:  785 C*EDTVSKDXTVILLCXAAXDRKSV 859
            C + TVSKD TVIL    A D+K +
Sbjct:  350 CKKVTVSKDDTVIL--DGAGDKKGI 372          
BLAST of EY720838 vs. ExPASy Swiss-Prot
Match: CH62_CUCMA (Chaperonin CPN60-2, mitochondrial OS=Cucurbita maxima GN=CPN60-2 PE=1 SV=1)

HSP 1 Score: 103.99 bits (258), Expect = 1.813e-26
Identity = 61/135 (45.19%), Postives = 90/135 (66.67%), Query Frame = 3
Query:  237 AQPITSFEQIALFGTAAANGDRVIGELIAKAFEKGWGNNLHVLAARKTPPSIELQLYWGMTLDRGYLSPYFITNHKTKECVLRDPYIMILEKKVSNCVFFDLLTEIGPVRRYNGTDVLIIAEDIENDLPSSLVLN 641
            A+ I++ E+IA  GT +ANG+R IGELIAKA EK     +  ++  KT  + EL++  GM LDRGY+SPYFITN K ++C L DP I+I EKK+S+      + E+   R+     +LI++ED+E+D  ++L+LN
Sbjct:  166 ARMISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITISDGKTLFN-ELEVVEGMKLDRGYISPYFITNQKNQKCELDDPLILIHEKKISSINSVVKVLELALKRQ---RPLLIVSEDVESDALATLILN 296          

HSP 2 Score: 28.8758 bits (63), Expect = 1.813e-26
Identity = 12/22 (54.55%), Postives = 14/22 (63.64%), Query Frame = 1
Query:  661 KACVIKPPXIGESXKAXLRDIA 726
            K C IK P  GE+ KA L D+A
Sbjct:  303 KVCAIKAPGFGENRKAGLHDLA 324          

HSP 3 Score: 24.2534 bits (51), Expect = 1.813e-26
Identity = 13/25 (52.00%), Postives = 17/25 (68.00%), Query Frame = 2
Query:  785 C*EDTVSKDXTVILLCXAAXDRKSV 859
            C + T+SKD TVIL    A D+KS+
Sbjct:  351 CKKITISKDDTVIL--DGAGDKKSI 373          

HSP 4 Score: 23.483 bits (49), Expect = 1.813e-26
Identity = 11/24 (45.83%), Postives = 15/24 (62.50%), Query Frame = 2
Query:  182 DQRQGARMAIDALVGNLYSTTHHI 253
            D R+G  MA+D++V NL S    I
Sbjct:  146 DLRRGISMAVDSVVTNLKSRARMI 169          
BLAST of EY720838 vs. ExPASy Swiss-Prot
Match: CH60B_ARATH (Chaperonin CPN60-like 1, mitochondrial OS=Arabidopsis thaliana GN=At2g33210 PE=1 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 3.034e-26
Identity = 61/135 (45.19%), Postives = 89/135 (65.93%), Query Frame = 3
Query:  237 AQPITSFEQIALFGTAAANGDRVIGELIAKAFEKGWGNNLHVLAARKTPPSIELQLYWGMTLDRGYLSPYFITNHKTKECVLRDPYIMILEKKVSNCVFFDLLTEIGPVRRYNGTDVLIIAEDIENDLPSSLVLN 641
            A+ I++ E+IA  GT +ANGDR IGELIAKA E      +  +   KT  + EL++  GM +DRGY+SPYFITN KT++C L DP I+I EKK+SN    + + ++  +       +LI+AED+E+D  ++L+LN
Sbjct:  166 ARMISTSEEIAQVGTISANGDREIGELIAKAMETVGKEGVITIQDGKTLFN-ELEVVEGMKIDRGYISPYFITNPKTQKCELEDPLILIHEKKISN---INAMVKVLELALKKQRPLLIVAEDVESDALATLILN 296          

HSP 2 Score: 28.4906 bits (62), Expect = 3.034e-26
Identity = 11/22 (50.00%), Postives = 14/22 (63.64%), Query Frame = 1
Query:  661 KACVIKPPXIGESXKAXLRDIA 726
            K C +K P  GE+ KA L D+A
Sbjct:  303 KVCAVKAPGFGENRKANLHDLA 324          

HSP 3 Score: 23.483 bits (49), Expect = 3.034e-26
Identity = 10/24 (41.67%), Postives = 15/24 (62.50%), Query Frame = 2
Query:  182 DQRQGARMAIDALVGNLYSTTHHI 253
            D R+G ++A+D +V NL S    I
Sbjct:  146 DLRRGIKLAVDTVVTNLQSRARMI 169          

HSP 4 Score: 21.557 bits (44), Expect = 3.034e-26
Identity = 11/25 (44.00%), Postives = 17/25 (68.00%), Query Frame = 2
Query:  785 C*EDTVSKDXTVILLCXAAXDRKSV 859
            C + TVSKD TV+L    A D++++
Sbjct:  351 CKKVTVSKDDTVVL--DGAGDKQAI 373          
BLAST of EY720838 vs. ExPASy Swiss-Prot
Match: CH61_CUCMA (Chaperonin CPN60-1, mitochondrial OS=Cucurbita maxima GN=CPN60-1 PE=1 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 3.929e-26
Identity = 58/135 (42.96%), Postives = 90/135 (66.67%), Query Frame = 3
Query:  237 AQPITSFEQIALFGTAAANGDRVIGELIAKAFEKGWGNNLHVLAARKTPPSIELQLYWGMTLDRGYLSPYFITNHKTKECVLRDPYIMILEKKVSNCVFFDLLTEIGPVRRYNGTDVLIIAEDIENDLPSSLVLN 641
            A+ I++ E+IA  GT +ANG+R IGELIAKA EK     +  ++  KT  + EL++  GM LDRGY+SPYFITN K ++C L DP I+I EKK+S+    + + ++  +       +LI++ED+E++  ++L+LN
Sbjct:  166 ARMISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITISDGKTMDN-ELEVVEGMKLDRGYISPYFITNQKNQKCELDDPLIIIYEKKISS---INAVVKVLELALKKQRPLLIVSEDVESEALATLILN 296          

HSP 2 Score: 29.261 bits (64), Expect = 3.929e-26
Identity = 12/22 (54.55%), Postives = 15/22 (68.18%), Query Frame = 1
Query:  661 KACVIKPPXIGESXKAXLRDIA 726
            K C IK P  GE+ KA L+D+A
Sbjct:  303 KVCAIKAPGFGENRKAGLQDLA 324          

HSP 3 Score: 23.483 bits (49), Expect = 3.929e-26
Identity = 11/24 (45.83%), Postives = 15/24 (62.50%), Query Frame = 2
Query:  182 DQRQGARMAIDALVGNLYSTTHHI 253
            D R+G  MA+D++V NL S    I
Sbjct:  146 DLRRGISMAVDSVVTNLKSRARMI 169          

HSP 4 Score: 23.0978 bits (48), Expect = 3.929e-26
Identity = 12/25 (48.00%), Postives = 17/25 (68.00%), Query Frame = 2
Query:  785 C*EDTVSKDXTVILLCXAAXDRKSV 859
            C + T+SKD TVIL    A D+K++
Sbjct:  351 CKKITISKDDTVIL--DGAGDKKAI 373          
BLAST of EY720838 vs. ExPASy Swiss-Prot
Match: CH61_MAIZE (Chaperonin CPN60-1, mitochondrial OS=Zea mays GN=CPN60I PE=1 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 4.113e-25
Identity = 59/135 (43.70%), Postives = 88/135 (65.19%), Query Frame = 3
Query:  237 AQPITSFEQIALFGTAAANGDRVIGELIAKAFEKGWGNNLHVLAARKTPPSIELQLYWGMTLDRGYLSPYFITNHKTKECVLRDPYIMILEKKVSNCVFFDLLTEIGPVRRYNGTDVLIIAEDIENDLPSSLVLN 641
            A+ I++ E+IA  GT +ANG+R IGELIAKA EK     +  +A   T  + EL++  GM LDRGY+SPYFITN KT++C L DP I+I +KKV+N      + ++  +       +LI+AED+E++   +L++N
Sbjct:  168 ARMISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIADGNTLYN-ELEVVEGMKLDRGYISPYFITNSKTQKCELEDPLILIHDKKVTN---MHAVVKVLEMALKKQKPLLIVAEDVESEALGTLIIN 298          

HSP 2 Score: 28.8758 bits (63), Expect = 4.113e-25
Identity = 11/22 (50.00%), Postives = 15/22 (68.18%), Query Frame = 1
Query:  661 KACVIKPPXIGESXKAXLRDIA 726
            K C +K P  GE+ KA L+D+A
Sbjct:  305 KVCAVKAPGFGENRKANLQDLA 326          

HSP 3 Score: 24.6386 bits (52), Expect = 4.113e-25
Identity = 14/25 (56.00%), Postives = 17/25 (68.00%), Query Frame = 2
Query:  785 C*EDTVSKDXTVILLCXAAXDRKSV 859
            C + TVSKD TVIL    A D+KS+
Sbjct:  353 CKKVTVSKDDTVIL--DGAGDKKSI 375          
BLAST of EY720838 vs. ExPASy Swiss-Prot
Match: CH62_MAIZE (Chaperonin CPN60-2, mitochondrial OS=Zea mays GN=CPN60II PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 1.512e-24
Identity = 58/135 (42.96%), Postives = 87/135 (64.44%), Query Frame = 3
Query:  237 AQPITSFEQIALFGTAAANGDRVIGELIAKAFEKGWGNNLHVLAARKTPPSIELQLYWGMTLDRGYLSPYFITNHKTKECVLRDPYIMILEKKVSNCVFFDLLTEIGPVRRYNGTDVLIIAEDIENDLPSSLVLN 641
            A+ I++ E+IA  GT +ANG+R IGELIAKA EK     +  +A   T  + EL++  GM LDRGY+SPYFITN K ++C L DP I+I +KKV+N      + ++  +       +LI+AED+E++   +L++N
Sbjct:  168 ARMISTSEEIAQVGTISANGEREIGELIAKAMEKVGKEGVITIADGNTLYN-ELEVVEGMKLDRGYISPYFITNSKAQKCELEDPLILIHDKKVTN---MHAVVKVLEMALKKQRPLLIVAEDVESEALGTLIIN 298          

HSP 2 Score: 28.8758 bits (63), Expect = 1.512e-24
Identity = 11/22 (50.00%), Postives = 15/22 (68.18%), Query Frame = 1
Query:  661 KACVIKPPXIGESXKAXLRDIA 726
            K C +K P  GE+ KA L+D+A
Sbjct:  305 KVCAVKAPGFGENRKANLQDLA 326          

HSP 3 Score: 24.6386 bits (52), Expect = 1.512e-24
Identity = 14/25 (56.00%), Postives = 17/25 (68.00%), Query Frame = 2
Query:  785 C*EDTVSKDXTVILLCXAAXDRKSV 859
            C + TVSKD TVIL    A D+KS+
Sbjct:  353 CKKVTVSKDDTVIL--DGAGDKKSI 375          
BLAST of EY720838 vs. ExPASy Swiss-Prot
Match: CH60_CHLT3 (60 kDa chaperonin OS=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) GN=groL PE=3 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 6.891e-21
Identity = 63/155 (40.65%), Postives = 94/155 (60.65%), Query Frame = 3
Query:  189 DKGLEWQLMHLWEIYTAQPITSFEQIALFGTAAANGDRVIGELIAKAFEK-GWGNNLHVLAARKTPPSIELQLYWGMTLDRGYLSPYFITNHKTKECVLRDPYIMILEKKVSNCVFFDLLTEIGPV---RRYNGTDVLIIAEDIENDLPSSLVLN 641
            DK +   ++ L +I  ++PI   ++IA  G  +AN D  IG+LIA+A EK G    + V  A+ T    EL++  GM  DRGYLSPYF+TN  + E VL +PYI+I +KK+SN      + E+ P+      +G  +LIIAE+IE +  ++LV+N
Sbjct:  121 DKAVTGVIIELKKI--SRPIADKKEIAQVGCISANNDSEIGDLIAEAMEKVGKDGVITVEEAKGT--ETELKVVEGMQFDRGYLSPYFVTNADSMEAVLDEPYILIYDKKISN------MKELLPILEKTAQSGRPLLIIAEEIEGEALATLVVN 265          

HSP 2 Score: 27.335 bits (59), Expect = 6.891e-21
Identity = 11/22 (50.00%), Postives = 13/22 (59.09%), Query Frame = 1
Query:  661 KACVIKPPXIGESXKAXLRDIA 726
            K C +K P  G+  KA L DIA
Sbjct:  272 KVCAVKAPGFGDRRKAMLEDIA 293          
BLAST of EY720838 vs. ExPASy Swiss-Prot
Match: CH60C_ARATH (Chaperonin CPN60-like 2, mitochondrial OS=Arabidopsis thaliana GN=At3g13860 PE=1 SV=2)

HSP 1 Score: 93.2041 bits (230), Expect = 2.563e-20
Identity = 55/132 (41.67%), Postives = 84/132 (63.64%), Query Frame = 3
Query:  246 ITSFEQIALFGTAAANGDRVIGELIAKAFEKGWGNNLHVLAARKTPPSIELQLYWGMTLDRGYLSPYFITNHKTKECVLRDPYIMILEKKVSNCVFFDLLTEIGPVRRYNGTDVLIIAEDIENDLPSSLVLN 641
            I++ E+I    T +ANG+R IGELIA+A EK     +  +A   T  + EL++  GM L RGY+SPYFIT+ KT++C L +P I+I EKK+S+    + L ++      +   +LI+AED+E+D  + L+LN
Sbjct:  168 ISTPEEITQVATISANGEREIGELIARAMEKVGKEGVITVADGNTLDN-ELEVVEGMKLARGYISPYFITDEKTQKCELENPIILIHEKKISD---INSLLKVLEAAVKSSRPLLIVAEDVESDALAMLILN 295          

HSP 2 Score: 26.9498 bits (58), Expect = 2.563e-20
Identity = 11/22 (50.00%), Postives = 14/22 (63.64%), Query Frame = 1
Query:  661 KACVIKPPXIGESXKAXLRDIA 726
            K C IK P  G++ KA L D+A
Sbjct:  302 KVCAIKAPGFGDNRKASLDDLA 323          
BLAST of EY720838 vs. ExPASy Swiss-Prot
Match: CH60_PROA2 (60 kDa chaperonin OS=Prosthecochloris aestuarii (strain DSM 271 / SK 413) GN=groL PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.337e-20
Identity = 57/138 (41.30%), Postives = 84/138 (60.87%), Query Frame = 3
Query:  237 AQPITSFEQIALFGTAAANGDRVIGELIAKAFEKGWGNNLHVLAARKTPPSIELQLYWGMTLDRGYLSPYFITNHKTKECVLRDPYIMILEKKVSNCVFFDLLTEIGPV---RRYNGTDVLIIAEDIENDLPSSLVLN 641
            ++ IT  ++IA  GT +AN D  IGELIA+A +K   + +  +   K   + EL +  GM  DRGYLSPYF+TN +  +  L DPYI+I +KK+SN      + E+ PV      +G  ++IIAEDIE +  ++LV+N
Sbjct:  135 SRDITGKKEIAQVGTISANNDPEIGELIAEAMDKVGKDGVITVEEAKGMDT-ELTVVEGMQFDRGYLSPYFVTNSEKMDADLEDPYILIYDKKISN------MKELLPVLEKTAQSGRPLMIIAEDIEGEALATLVVN 265          

HSP 2 Score: 27.335 bits (59), Expect = 3.337e-20
Identity = 11/22 (50.00%), Postives = 13/22 (59.09%), Query Frame = 1
Query:  661 KACVIKPPXIGESXKAXLRDIA 726
            K C +K P  G+  KA L DIA
Sbjct:  272 KVCAVKAPGFGDRRKAMLEDIA 293          
BLAST of EY720838 vs. ExPASy Swiss-Prot
Match: CH60_CHLCH (60 kDa chaperonin OS=Chlorobium chlorochromatii (strain CaD3) GN=groL PE=3 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 4.341e-20
Identity = 58/138 (42.03%), Postives = 85/138 (61.59%), Query Frame = 3
Query:  237 AQPITSFEQIALFGTAAANGDRVIGELIAKAFEKGWGNNLHVLAARKTPPSIELQLYWGMTLDRGYLSPYFITNHKTKECVLRDPYIMILEKKVSNCVFFDLLTEIGPV---RRYNGTDVLIIAEDIENDLPSSLVLN 641
            ++ I+S ++IA  GT +AN D  IGELIA+A EK   + +  +   K   + EL++  GM  DRGYLSPYF+TN  T E  L +P I+I +KK+SN      + E+ P+      +G  +LIIAEDIE +  ++LV+N
Sbjct:  135 SRSISSKKEIAQVGTISANNDPEIGELIAEAMEKVGKDGVITVEEAKGMET-ELKVVEGMQFDRGYLSPYFVTNSDTMEAELDNPLILIYDKKISN------MKELLPILEKSAQSGRPLLIIAEDIEGEALATLVVN 265          

HSP 2 Score: 27.335 bits (59), Expect = 4.341e-20
Identity = 11/22 (50.00%), Postives = 13/22 (59.09%), Query Frame = 1
Query:  661 KACVIKPPXIGESXKAXLRDIA 726
            K C +K P  G+  KA L DIA
Sbjct:  272 KVCAVKAPGFGDRRKAMLEDIA 293          
The following BLAST results are available for this feature:
BLAST of EY720838 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CH60A_ARATH1.082e-2645.93Chaperonin CPN60, mitochondrial OS=Arabidopsis tha... [more]
CH62_CUCMA1.813e-2645.19Chaperonin CPN60-2, mitochondrial OS=Cucurbita max... [more]
CH60B_ARATH3.034e-2645.19Chaperonin CPN60-like 1, mitochondrial OS=Arabidop... [more]
CH61_CUCMA3.929e-2642.96Chaperonin CPN60-1, mitochondrial OS=Cucurbita max... [more]
CH61_MAIZE4.113e-2543.70Chaperonin CPN60-1, mitochondrial OS=Zea mays GN=C... [more]
CH62_MAIZE1.512e-2442.96Chaperonin CPN60-2, mitochondrial OS=Zea mays GN=C... [more]
CH60_CHLT36.891e-2140.6560 kDa chaperonin OS=Chloroherpeton thalassium (st... [more]
CH60C_ARATH2.563e-2041.67Chaperonin CPN60-like 2, mitochondrial OS=Arabidop... [more]
CH60_PROA23.337e-2041.3060 kDa chaperonin OS=Prosthecochloris aestuarii (s... [more]
CH60_CHLCH4.341e-2042.0360 kDa chaperonin OS=Chlorobium chlorochromatii (s... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-015-A05-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720838 ID=EY720838; Name=EY720838; organism=Citrus sinensis; type=EST; length=898bp
CACGCGTCCGCAAAATCACAAACGATGTTGCGCCATGCCTCTGACCTCGC
CTCCAAAGTCAGGTTCATTTAACTCGGAGCAGACAGTATACCGCGGCGGA
AGTCACTAAAAGATTTTTTGATTGCACCAATTCTAAAGTTAAAAGGGAGA
ATTTTATATGCGGGAGGATGCGGAAGTGCCAGACCAAAGACAAGGGGCTA
GAATGGCAATTGATGCACTTGTGGGAAATTTATACAGCACAACCCATCAC
ATCATTCGAACAAATAGCCCTGTTTGGAACGGCTGCAGCAAATGGTGACA
GAGTGATTGGCGAGCTCATAGCCAAGGCTTTTGAGAAAGGTTGGGGAAAC
AATCTTCATGTTTTAGCTGCTCGGAAAACACCACCCAGTATTGAACTTCA
GTTGTATTGGGGAATGACCCTAGACAGGGGCTATTTGTCACCTTACTTCA
TCACCAATCATAAGACAAAAGAATGTGTNTTACGAGATCCTTATATCATG
ATCCTTGAGAAAAAGGTTTCGAACTGCGTCTTCTTTGACTTATTGACAGA
GATTGGACCAGTTAGAAGATATAATGGCACAGATGTACTGATTATTGCTG
AAGATATTGAAAATGATCTCCCTAGCAGTCTTGTCTTAAATGGGAGTGGC
TACAGCAACCAAGGCTTGTGTCATAAAACCTCCTGNNATTGGGGAAAGTA
NGAAGGCTANCCTTCGGGACATTGCCCAATCACATATGGGGAAGTCATGA
CANGANNAGATTTTGAATGCGTATCTCTTGGCCATGCTGAGAAGATACGG
TATCAAAGGATCANACGGTTATCCTTCTTTGTANGGCTGCATANGACAGA
AAAAGTGTTACAATGGAGATTCCAATGGAAAATTACAAGATTCCCTGA
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