EY720837

Overview
NameEY720837
Unique NameEY720837
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length885
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720837 vs. ExPASy Swiss-Prot
Match: IF4E3_ARATH (Eukaryotic translation initiation factor 4E type 3 OS=Arabidopsis thaliana GN=At5g18110 PE=2 SV=1)

HSP 1 Score: 258.84 bits (660), Expect = 2.897e-68
Identity = 130/223 (58.30%), Postives = 156/223 (69.96%), Query Frame = 3
Query:  114 MEITDKKESDINNTQTVADSVDNN---NKDAEERQARELKANLHPLKNKFVFWYTRRTPGVRTQTSYEDNIKKIVDFSTVEGFWVCYCHLARPSLLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWEXXXXXXXXXXXXXXXNICGAVPSIRFHEDILSVWERQCI*SSGCDGS*RFYQTAL*AAHSYVMEYSPQDASLGDNSSYKNNGLKG 773
            ME+ D+++ +I ++  + DS+ ++   +  +EER++RELK   HPL+ KF  WYTRRTPGVR Q SYEDNIKK+V+FSTVEGFW CYCHLAR SLLPSPTDLH FK+GIRPLWED ANCNGGKWIIRF KVVS RFWE               NICGAV S+RF+EDI+SVW R         G     +  L   H+YVMEY P DASL DNSSY+N  L+G
Sbjct:    1 MEVLDRRDDEIRDSGNM-DSIKSHYVTDSVSEERRSRELKDGDHPLRYKFSIWYTRRTPGVRNQ-SYEDNIKKMVEFSTVEGFWACYCHLARSSLLPSPTDLHFFKDGIRPLWEDGANCNGGKWIIRFSKVVSARFWEDLLLALVGDQLDDADNICGAVLSVRFNEDIISVWNRNASDHQAVMGLRDSIKRHLKLPHAYVMEYKPHDASLRDNSSYRNTWLRG 221          
BLAST of EY720837 vs. ExPASy Swiss-Prot
Match: IF4E2_HUMAN (Eukaryotic translation initiation factor 4E type 2 OS=Homo sapiens GN=EIF4E2 PE=1 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.895e-35
Identity = 75/171 (43.86%), Postives = 103/171 (60.23%), Query Frame = 3
Query:  126 DKKESDINNTQTVADSVD---NNNKDAEERQARELKANLHPLKNKFVFWYTRRTPGVRTQT-SYEDNIKKIVDFSTVEGFWVCYCHLARPSLLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWEXXXXXXXXXXXXXXXNICGAVPSIRFHEDILSVWER 626
            D  +++ N+TQ   +      + N+ + +R+A       HPL+  + FWY+RRTPG  T + SYE NIK+I  F++VE FW  Y H+ RP  L   +D HLFKEGI+P+WED AN NGGKWIIR +K ++ R WE                ICGAV S+RF EDI+S+W +
Sbjct:   15 DHDQNEENSTQKDGEKEKTERDKNQSSSKRKAVVPGPAEHPLQYNYTFWYSRRTPGRPTSSQSYEQNIKQIGTFASVEQFWRFYSHMVRPGDLTGHSDFHLFKEGIKPMWEDDANKNGGKWIIRLRKGLASRCWENLILAMLGEQFMVGEEICGAVVSVRFQEDIISIWNK 185          
BLAST of EY720837 vs. ExPASy Swiss-Prot
Match: IF4E2_MOUSE (Eukaryotic translation initiation factor 4E type 2 OS=Mus musculus GN=Eif4e2 PE=1 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 9.407e-35
Identity = 74/171 (43.27%), Postives = 102/171 (59.65%), Query Frame = 3
Query:  126 DKKESDINNTQTVADSVDNNNKDAE---ERQARELKANLHPLKNKFVFWYTRRTPGVRTQT-SYEDNIKKIVDFSTVEGFWVCYCHLARPSLLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWEXXXXXXXXXXXXXXXNICGAVPSIRFHEDILSVWER 626
            D  +++ N+TQ   +    +   ++   +R+A       HPL+  + FWY+RRTPG  T + SYE NIK+I  F++VE FW  Y H+ RP  L   +D HLFKEGI+P+WED AN NGGKWIIR +K ++ R WE                ICGAV S+RF EDI+S+W +
Sbjct:   15 DHDQNEENSTQKDGEKEKTDRDKSQSSGKRKAVVPGPAEHPLQYNYTFWYSRRTPGRPTSSQSYEQNIKQIGTFASVEQFWKFYSHMVRPGDLTGHSDFHLFKEGIKPMWEDDANKNGGKWIIRLRKGLASRCWENLILAMLGEQFMVGEEICGAVVSVRFQEDIISIWNK 185          
BLAST of EY720837 vs. ExPASy Swiss-Prot
Match: IF4E4_CAEEL (Eukaryotic translation initiation factor 4E-4 OS=Caenorhabditis elegans GN=ife-4 PE=2 SV=1)

HSP 1 Score: 118.242 bits (295), Expect = 6.111e-26
Identity = 62/175 (35.43%), Postives = 86/175 (49.14%), Query Frame = 3
Query:  234 HPLKNKFVFWYTRRTPGVRTQTSYEDNIKKIVDFSTVEGFWVCYCHLARPSLLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWEXXXXXXXXXXXXXXXNICGAVPSIRFHEDILSVWERQCI*SSGCDGS*RFYQTAL*AAHSYVMEYSPQDASLGDNSSYKN 758
            H L+  + F Y  R  G      Y   ++ +    +VE FW    H  RP+ +    D+H FK G++P+WED ANC GGKWIIR KK +S R WE                +CGAV SIR  EDI+S+W R    +   +      ++ L    + V+EY   D  L D SSY++
Sbjct:   31 HQLQYSYTFSYFMRPTGKFDPEDYASYVQPVGIMKSVEQFWSIMVHFKRPTEMCDKADIHFFKTGVKPVWEDPANCKGGKWIIRLKKGLSTRIWENLLMAIIGEQFLVGDELCGAVCSIRNQEDIISLWNRNADDTPVTNRIRETLRSVLQLPQNTVLEYKRHDDCLRDQSSYRH 205          
BLAST of EY720837 vs. ExPASy Swiss-Prot
Match: I4E1B_HUMAN (Eukaryotic translation initiation factor 4E type 1B OS=Homo sapiens GN=EIF4E1B PE=2 SV=3)

HSP 1 Score: 102.449 bits (254), Expect = 3.470e-21
Identity = 68/228 (29.82%), Postives = 103/228 (45.18%), Query Frame = 3
Query:   93 KEKENQ*MEITDKKESDINNTQTVADSVDNNNKDAEERQARELKANLHPLKNKFVFWYTRRTPGVRTQTSYEDNIKKIVDFSTVEGFWVCYCHLARPSLLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKK----VVSGRFW-EXXXXXXXXXXXXXXXNICGAVPSIRFHEDILSVWERQCI*SSGCDGS*RFYQTAL*AAHSYVMEYSPQ-DASLGDNSSYKN 758
            +EKE +  E T   E   N+ +T+          A      E+K  LHPL+N++  W+ +         +++DN+  +    TVE FW  Y H+   S L S  D  LFK+GI+P+WEDS N  GG+W++   K    +   R W E                +CGAV +IR   D ++VW R+    +G     R Y+  L  +   ++ Y    D +   NS  KN
Sbjct:   19 EEKEEEAAERTPTGEKSPNSPRTLLSL----RGKARTGGPMEVKLELHPLQNRWALWFFKND----RSRAWQDNLHLVTKVDTVEDFWALYSHIQLASKLSSGCDYALFKDGIQPMWEDSRNKRGGRWLVSLAKQQRHIELDRLWLETLLCLIGESFEEHSREVCGAVVNIRTKGDKIAVWTREAENQAGVLHVGRVYKERLGLSPKTIIGYQAHADTATKSNSLAKN 238          
BLAST of EY720837 vs. ExPASy Swiss-Prot
Match: I4E1B_MOUSE (Eukaryotic translation initiation factor 4E type 1B OS=Mus musculus GN=Eif4e1b PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 7.236e-19
Identity = 56/202 (27.72%), Postives = 93/202 (46.04%), Query Frame = 3
Query:  171 SVDNNNKDAEERQARELKANLHPLKNKFVFWYTRRTPGVRTQTSYEDNIKKIVDFSTVEGFWVCYCHLARPSLLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVS----GRFW-EXXXXXXXXXXXXXXXNICGAVPSIRFHEDILSVWERQCI*SSGCDGS*RFYQTAL*AAHSYVMEYSPQDASLGDNSSYKNN 761
            S+    + A      E+ + LHPL+ ++V W+ +         +++DN++ +  F+TVE FW  Y H+   S L S  D  LFKEGI P+WED+ N  GG+W++   K +      R W E                +CGAV +IR   D +++W  +    +G     + Y+  L  +   ++ Y        D ++  NN
Sbjct:   44 SLKTQRRKAHREHPPEVLSKLHPLQYRWVLWFFKND----RSRAWQDNLQLVTKFNTVEDFWAVYSHIKLASKLSSGCDYALFKEGILPMWEDNRNKQGGRWLLSIDKQLRHFELDRLWLETLLCLVGNCFEEYSREVCGAVVNIRTKRDKIALWTSEAEDKAGVMQIGQIYKERLGISTKTIIGYQAH----ADTAAKSNN 237          
BLAST of EY720837 vs. ExPASy Swiss-Prot
Match: IF4E_DICDI (Eukaryotic translation initiation factor 4E OS=Dictyostelium discoideum GN=eif4e PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.591e-18
Identity = 57/180 (31.67%), Postives = 87/180 (48.33%), Query Frame = 3
Query:  120 ITDKKESDINNTQTV-ADSVDNNNKDA-------EERQARELKANL--HPLKNKFVFWYTRRTPGVRTQTSYEDNIKKIVDFSTVEGFWVCYCHLARPSLLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFK-KVVSGRFWEXXXXXXXXXXXXXXXNICGAVPSIRFHEDILSVWER 626
            +T +  +  NNTQ    ++ DN NK+        EE+Q  E   NL  HPL+N++  WY  ++  +  +  + D++KK++ F +VE FW  + +L   S L   +  HLFK+ I P WE  +N  GGKW +  K K      W                 ICG V + R + D +SVW +
Sbjct:   26 VTSETTTTTNNTQNKETETTDNINKEETADKENKEEQQQEENPENLIKHPLQNRWSLWYDYQSGKINPE-HWVDSLKKVISFDSVEDFWCVFNNLPNVSNLKQGSSYHLFKDDIEPKWEHESNKRGGKWFVMVKDKSRCDNQWLQSVMACVGETFDSSDEICGIVYNSRKNGDKISVWTK 204          
BLAST of EY720837 vs. ExPASy Swiss-Prot
Match: IF4E1_ARATH (Eukaryotic translation initiation factor 4E-1 OS=Arabidopsis thaliana GN=EIF4E1 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.591e-18
Identity = 47/132 (35.61%), Postives = 69/132 (52.27%), Query Frame = 3
Query:  234 HPLKNKFVFWYTRRTPGVRT-QTSYEDNIKKIVDFSTVEGFWVCYCHLARPSLLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVSGRFWEXXXXXXXXXXXXXXXNICGAVPSIRFHEDILSVWER 626
            HPL++ + FW+    P V++ QTS+  +++ +  FSTVE FW  Y ++  PS L    D + FK  I P WED    NGGKW + F K  S + W                 ICGAV +IR  ++ +S+W +
Sbjct:   60 HPLEHSWTFWFDN--PAVKSKQTSWGSSLRPVFTFSTVEEFWSLYNNMKHPSKLAHGADFYCFKHIIEPKWEDPICANGGKWTMTFPKEKSDKSWLYTLLALIGEQFDHGDEICGAVVNIRGKQERISIWTK 189          
BLAST of EY720837 vs. ExPASy Swiss-Prot
Match: IF4E2_WHEAT (Eukaryotic translation initiation factor 4E-2 OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.365e-17
Identity = 51/135 (37.78%), Postives = 64/135 (47.41%), Query Frame = 3
Query:  234 HPLKNKFVFWY---TRRTPGVRTQTSYEDNIKKIVDFSTVEGFWVCYCHLARPSLLPSPTDLHLFKEGIRPLWEDSANCNGGKW-IIRFKKVVSGRFWEXXXXXXXXXXXXXXXNICGAVPSIRFHEDILSVWER 626
            H L+ ++ FWY   T+  PG    TS    +KK   F TVE FW  Y  + RPS L    D HLFK G+ P WED    NGGKW +I  +K      W                 ICG V S+R  +D LS+W +
Sbjct:   33 HKLQRQWTFWYDIQTKPKPGAAWGTS----LKKGYTFDTVEEFWCLYDQIFRPSKLVGSADFHLFKAGVEPKWEDPECANGGKWTVISSRKTNLDTMWLETCMALIGEQFDESQEICGVVASVRQRQDKLSLWTK 163          
BLAST of EY720837 vs. ExPASy Swiss-Prot
Match: IF4E_RAT (Eukaryotic translation initiation factor 4E OS=Rattus norvegicus GN=Eif4e PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 2.328e-17
Identity = 55/181 (30.39%), Postives = 82/181 (45.30%), Query Frame = 3
Query:  234 HPLKNKFVFWYTRRTPGVRTQTSYEDNIKKIVDFSTVEGFWVCYCHLARPSLLPSPTDLHLFKEGIRPLWEDSANCNGGKWIIRFKKVVS----GRFW-EXXXXXXXXXXXXXXXNICGAVPSIRFHEDILSVWERQCI*SSGCDGS*RFYQTAL*AAHSYVMEY-SPQDASLGDNSSYKN 758
            HPL+N++  W+ +         +++ N++ I  F TVE FW  Y H+   S L    D  LFK+GI P+WED  N  GG+W+I   K        RFW E               ++CGAV ++R   D +++W  +C          R Y+  L      V+ Y S  D +    S+ KN
Sbjct:   37 HPLQNRWALWFFKNDKS----KTWQANLRLISKFDTVEDFWALYNHIQLSSNLMPGCDYSLFKDGIEPMWEDEKNKRGGRWLITLNKQQRRSDLDRFWLETLLCLIGESFDDYSDDVCGAVVNVRAKGDKIAIWTTECENRDAVTHIGRVYKERLGLPPKIVIGYQSHADTATKSGSTTKN 213          
The following BLAST results are available for this feature:
BLAST of EY720837 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 42
Match NameE-valueIdentityDescription
IF4E3_ARATH2.897e-6858.30Eukaryotic translation initiation factor 4E type 3... [more]
IF4E2_HUMAN1.895e-3543.86Eukaryotic translation initiation factor 4E type 2... [more]
IF4E2_MOUSE9.407e-3543.27Eukaryotic translation initiation factor 4E type 2... [more]
IF4E4_CAEEL6.111e-2635.43Eukaryotic translation initiation factor 4E-4 OS=C... [more]
I4E1B_HUMAN3.470e-2129.82Eukaryotic translation initiation factor 4E type 1... [more]
I4E1B_MOUSE7.236e-1927.72Eukaryotic translation initiation factor 4E type 1... [more]
IF4E_DICDI3.591e-1831.67Eukaryotic translation initiation factor 4E OS=Dic... [more]
IF4E1_ARATH3.591e-1835.61Eukaryotic translation initiation factor 4E-1 OS=A... [more]
IF4E2_WHEAT1.365e-1737.78Eukaryotic translation initiation factor 4E-2 OS=T... [more]
IF4E_RAT2.328e-1730.39Eukaryotic translation initiation factor 4E OS=Rat... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-015-A04-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720837 ID=EY720837; Name=EY720837; organism=Citrus sinensis; type=EST; length=885bp
CCACGCGTCCGCCCACGCGTCCGTCTTCACTTCCTTGGTTTGGTTAAAAG
TGAGAAAATTAGGGCTTGAGGTGAAGAAGAACAAAATTTTAAAAAGAAAA
AGAAAATCAATAAATGGAAATAACAGATAAGAAGGAATCCGATATCAATA
ACACACAAACAGTCGCCGATTCCGTCGATAACAATAACAAAGACGCCGAA
GAACGCCAAGCTCGTGAACTTAAAGCCAATTTGCATCCTCTTAAGAACAA
GTTTGTCTTTTGGTACACTCGTCGAACACCTGGAGTTCGAACTCAAACAT
CCTATGAGGACAACATAAAGAAAATTGTGGACTTCAGTACTGTTGAAGGC
TTTTGGGTCTGCTATTGCCACTTGGCTCGTCCTTCTTTGTTGCCAAGCCC
TACAGATTTGCATCTTTTCAAGGAAGGAATTCGCCCATTATGGGAGGACT
CTGCAAATTGCAATGGCGGTAAATGGATAATAAGGTTCAAGAAAGTTGTA
TCAGGTCGCTTTTGGGAAGATCTGGTTCTTGCCTTGGTGGGTGACCANCT
TGACTATGGTGATAACATATGTGGTGCAGTCCCTAGCATTCGATTTCATG
AAGATATATTGAGTGTGTGGGAACGGCAATGCATCTGATCATCAGGCTGT
GATGGCTCTTAAAGATTCTATCAAACGGCACTTTAAGCTGCCCACAGCTA
TGTTATGGAATACAGCCCCCAGGATGCTTCTCTGGGCGATAACTCGTCAT
ACAAAAACAATGGGTTGAAAGGCAGNAATTCACTAAGGGTTATGAAACTG
CATTGATGGAGAAAGAACATGACGGTGGGGAGTCTTCGGGTTTTATTAAA
TGCGCCGGTTTGAATTTTTTTACACCGAAGATGCG
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