EY720830

Overview
NameEY720830
Unique NameEY720830
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length861
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720830 vs. ExPASy Swiss-Prot
Match: DHE2_ARATH (Glutamate dehydrogenase 2 OS=Arabidopsis thaliana GN=GDH2 PE=1 SV=1)

HSP 1 Score: 379.407 bits (973), Expect = 1.413e-104
Identity = 185/231 (80.09%), Postives = 206/231 (89.18%), Query Frame = 1
Query:  172 MNALAATNRNFRYAARILGLDSKLERSLLIPFREIKVECSIPKDDGSLATFVGFRIQHDNARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVAAIPYGGAKGGIGCNPRELSMSELERLTRVFTQKIHDLIGIHRDVPAPDMGTNSQTMAWILDEYSXFHGYSPAVVTGXAIDLGGSLGREAATGLGVFFGTEALLAEHGKSISI*NLLSRGL-ECGLLGKQIFHEHGGR 861
            MNALAATNRNFR+A+RILGLDSK+ERSL+IPFREIKVEC+IPKDDG+L +++GFR+QHDNARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVA IPYGGAKGGIGC+PR+LS+SELERLTRVFTQKIHDLIGIH DVPAPDMGTN+QTMAWILDEYS FHG+SPAVVTG  IDLGGSLGREAATG GV F TEALLAE+GKSI     + +G    G    ++ HE GG+
Sbjct:    1 MNALAATNRNFRHASRILGLDSKIERSLMIPFREIKVECTIPKDDGTLVSYIGFRVQHDNARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVADIPYGGAKGGIGCSPRDLSLSELERLTRVFTQKIHDLIGIHTDVPAPDMGTNAQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLGREAATGRGVVFATEALLAEYGKSIQGLTFVIQGFGNVGTWAAKLIHEKGGK 231          
BLAST of EY720830 vs. ExPASy Swiss-Prot
Match: DHE3_SOLLC (Glutamate dehydrogenase OS=Solanum lycopersicum GN=GDH1 PE=2 SV=1)

HSP 1 Score: 375.17 bits (962), Expect = 2.665e-103
Identity = 184/231 (79.65%), Postives = 202/231 (87.45%), Query Frame = 1
Query:  172 MNALAATNRNFRYAARILGLDSKLERSLLIPFREIKVECSIPKDDGSLATFVGFRIQHDNARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVAAIPYGGAKGGIGCNPRELSMSELERLTRVFTQKIHDLIGIHRDVPAPDMGTNSQTMAWILDEYSXFHGYSPAVVTGXAIDLGGSLGREAATGLGVFFGTEALLAEHGKSISI*NLLSRGL-ECGLLGKQIFHEHGGR 861
            MNALAATNRNF+ AAR+LGLDSKLE SLLIPFREIKVEC+IPKDDG+LA+FVGFR+QHDNARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVA IPYGGAKGGIGC+P +LS+SELERLTRVFTQKIHDLIGIH DVPAPDMGTN QTMAWILDEYS FHGYSPAVVTG  +DLGGSLGR+AATG G  F TEALL EHGKS++    + +G    G    ++ HE GG+
Sbjct:    1 MNALAATNRNFKLAARLLGLDSKLELSLLIPFREIKVECTIPKDDGTLASFVGFRVQHDNARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCSPSDLSISELERLTRVFTQKIHDLIGIHTDVPAPDMGTNPQTMAWILDEYSKFHGYSPAVVTGKPVDLGGSLGRDAATGRGALFATEALLNEHGKSVAGQRFVIQGFGNVGSWAAKLIHEQGGK 231          
BLAST of EY720830 vs. ExPASy Swiss-Prot
Match: DHE1_ARATH (Glutamate dehydrogenase 1 OS=Arabidopsis thaliana GN=GDH1 PE=1 SV=1)

HSP 1 Score: 375.17 bits (962), Expect = 2.665e-103
Identity = 186/231 (80.52%), Postives = 203/231 (87.88%), Query Frame = 1
Query:  172 MNALAATNRNFRYAARILGLDSKLERSLLIPFREIKVECSIPKDDGSLATFVGFRIQHDNARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVAAIPYGGAKGGIGCNPRELSMSELERLTRVFTQKIHDLIGIHRDVPAPDMGTNSQTMAWILDEYSXFHGYSPAVVTGXAIDLGGSLGREAATGLGVFFGTEALLAEHGKSISI*NLLSRGL-ECGLLGKQIFHEHGGR 861
            MNALAATNRNF+ AAR+LGLDSKLE+SLLIPFREIKVEC+IPKDDG+LA+FVGFR+QHDNARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVA IPYGGAKGGIGC+P +LS+SELERLTRVFTQKIHDLIGIH DVPAPDMGT  QTMAWILDEYS FHGYSPAVVTG  IDLGGSLGR+AATG GV FGTEALL EHGK+IS    + +G    G    ++  E GG+
Sbjct:    1 MNALAATNRNFKLAARLLGLDSKLEKSLLIPFREIKVECTIPKDDGTLASFVGFRVQHDNARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVAKIPYGGAKGGIGCDPSKLSISELERLTRVFTQKIHDLIGIHTDVPAPDMGTGPQTMAWILDEYSKFHGYSPAVVTGKPIDLGGSLGRDAATGRGVMFGTEALLNEHGKTISGQRFVIQGFGNVGSWAAKLISEKGGK 231          
BLAST of EY720830 vs. ExPASy Swiss-Prot
Match: DHE3_VITVI (Glutamate dehydrogenase OS=Vitis vinifera GN=GDH PE=2 SV=1)

HSP 1 Score: 373.629 bits (958), Expect = 7.753e-103
Identity = 186/231 (80.52%), Postives = 202/231 (87.45%), Query Frame = 1
Query:  172 MNALAATNRNFRYAARILGLDSKLERSLLIPFREIKVECSIPKDDGSLATFVGFRIQHDNARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVAAIPYGGAKGGIGCNPRELSMSELERLTRVFTQKIHDLIGIHRDVPAPDMGTNSQTMAWILDEYSXFHGYSPAVVTGXAIDLGGSLGREAATGLGVFFGTEALLAEHGKSISI*NLLSRGL-ECGLLGKQIFHEHGGR 861
            MNALAATNRNFR+A+RILGLDSKLE+SLLIPFREIKVEC+IPKDDGSLAT+VGFR+QHDNARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAV  IPYGGAKGGIGC P++LSMSELERLTRVFTQKIHDLIG H DVPAPDMGTN+QTMAWILDEYS FHG+SPAVVTG  I LGGSLGREAATG GV F TEALLA+HGKSI     + +G    G    ++  E GG+
Sbjct:    1 MNALAATNRNFRHASRILGLDSKLEKSLLIPFREIKVECTIPKDDGSLATYVGFRVQHDNARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVVDIPYGGAKGGIGCTPKDLSMSELERLTRVFTQKIHDLIGTHTDVPAPDMGTNAQTMAWILDEYSKFHGHSPAVVTGKPIALGGSLGREAATGRGVVFATEALLAQHGKSIKGLTFVIQGFGNVGSWVARLIGERGGK 231          
BLAST of EY720830 vs. ExPASy Swiss-Prot
Match: DHEB_NICPL (Glutamate dehydrogenase B OS=Nicotiana plumbaginifolia GN=GDHB PE=2 SV=1)

HSP 1 Score: 372.474 bits (955), Expect = 1.727e-102
Identity = 183/231 (79.22%), Postives = 201/231 (87.01%), Query Frame = 1
Query:  172 MNALAATNRNFRYAARILGLDSKLERSLLIPFREIKVECSIPKDDGSLATFVGFRIQHDNARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVAAIPYGGAKGGIGCNPRELSMSELERLTRVFTQKIHDLIGIHRDVPAPDMGTNSQTMAWILDEYSXFHGYSPAVVTGXAIDLGGSLGREAATGLGVFFGTEALLAEHGKSISI*NLLSRGL-ECGLLGKQIFHEHGGR 861
            MNALAATNRNF+ A+R+LGLDSKLE+ LLIPFREIKVEC+IPKDDGSLATF+GFR+QHDNARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVA IPYGGAKGGIGC+P +LS+SELERLTRVFTQKIHDLIG+H DVPAPDMGTN QTMAWILDEYS FHGYSPAVVTG  IDLGGSLGR+AATG GV F  EALL +HGKSI+    + +G    G    Q+  E GG+
Sbjct:    1 MNALAATNRNFKLASRLLGLDSKLEQCLLIPFREIKVECTIPKDDGSLATFIGFRVQHDNARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCSPSDLSISELERLTRVFTQKIHDLIGVHTDVPAPDMGTNPQTMAWILDEYSKFHGYSPAVVTGKPIDLGGSLGRDAATGRGVLFAAEALLRDHGKSIAGQRFVVQGFGNVGSWAAQLITEQGGK 231          
BLAST of EY720830 vs. ExPASy Swiss-Prot
Match: DHE3_MAIZE (Glutamate dehydrogenase OS=Zea mays GN=GDH1 PE=1 SV=1)

HSP 1 Score: 370.548 bits (950), Expect = 6.563e-102
Identity = 183/231 (79.22%), Postives = 203/231 (87.88%), Query Frame = 1
Query:  172 MNALAATNRNFRYAARILGLDSKLERSLLIPFREIKVECSIPKDDGSLATFVGFRIQHDNARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVAAIPYGGAKGGIGCNPRELSMSELERLTRVFTQKIHDLIGIHRDVPAPDMGTNSQTMAWILDEYSXFHGYSPAVVTGXAIDLGGSLGREAATGLGVFFGTEALLAEHGKSISI*NLLSRGL-ECGLLGKQIFHEHGGR 861
            MNALAAT+RNF+ AA++LGLDSKLE+SLLIPFREIKVEC+IPKDDG+LA++VGFR+QHDNARGPMKGGIRYH EVDPDEVNALAQLMTWKTAVA IPYGGAKGGIGC+P +LS+SELERLTRVFTQKIHDLIGIH DVPAPDMGTNSQTMAWILDEYS FHGYSPAVVTG  +DLGGSLGR+AATG GV F TEALLAEHGK I+    + +G    G    Q+  E GG+
Sbjct:    1 MNALAATSRNFKQAAKLLGLDSKLEKSLLIPFREIKVECTIPKDDGTLASYVGFRVQHDNARGPMKGGIRYHHEVDPDEVNALAQLMTWKTAVANIPYGGAKGGIGCSPGDLSISELERLTRVFTQKIHDLIGIHTDVPAPDMGTNSQTMAWILDEYSKFHGYSPAVVTGKPVDLGGSLGRDAATGRGVLFATEALLAEHGKGIAGQRFVIQGFGNVGSWAAQLISEAGGK 231          
BLAST of EY720830 vs. ExPASy Swiss-Prot
Match: DHEA_NICPL (Glutamate dehydrogenase A OS=Nicotiana plumbaginifolia GN=GDHA PE=2 SV=1)

HSP 1 Score: 368.237 bits (944), Expect = 3.257e-101
Identity = 182/231 (78.79%), Postives = 201/231 (87.01%), Query Frame = 1
Query:  172 MNALAATNRNFRYAARILGLDSKLERSLLIPFREIKVECSIPKDDGSLATFVGFRIQHDNARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVAAIPYGGAKGGIGCNPRELSMSELERLTRVFTQKIHDLIGIHRDVPAPDMGTNSQTMAWILDEYSXFHGYSPAVVTGXAIDLGGSLGREAATGLGVFFGTEALLAEHGKSISI*NLLSRGL-ECGLLGKQIFHEHGGR 861
            MNALAATNRNFR AARILGLDSKLE+SLLIPFREIKVEC+IPKDDG+L ++VGFR+QHDNARGPMKGGIRYHPEVD DEVNALAQLMTWKTAVA IPYGGAKGGIGC P++LS SELERLTRVFTQKIHDLIGI+ DVPAPDMGTN+QTMAWILDEYS FHG+SPA+VTG  IDLGGSLGREAATG GV + TEALLAE+GK+I       +G    G    ++ HE GG+
Sbjct:    1 MNALAATNRNFRQAARILGLDSKLEKSLLIPFREIKVECTIPKDDGTLVSYVGFRVQHDNARGPMKGGIRYHPEVDLDEVNALAQLMTWKTAVADIPYGGAKGGIGCKPKDLSKSELERLTRVFTQKIHDLIGINTDVPAPDMGTNAQTMAWILDEYSKFHGHSPAIVTGKPIDLGGSLGREAATGRGVVYATEALLAEYGKNIKDLTFAIQGFGNVGAWAAKLIHERGGK 231          
BLAST of EY720830 vs. ExPASy Swiss-Prot
Match: DHE3_ARATH (Probable glutamate dehydrogenase 3 OS=Arabidopsis thaliana GN=GSH3 PE=1 SV=1)

HSP 1 Score: 368.237 bits (944), Expect = 3.257e-101
Identity = 182/231 (78.79%), Postives = 201/231 (87.01%), Query Frame = 1
Query:  172 MNALAATNRNFRYAARILGLDSKLERSLLIPFREIKVECSIPKDDGSLATFVGFRIQHDNARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVAAIPYGGAKGGIGCNPRELSMSELERLTRVFTQKIHDLIGIHRDVPAPDMGTNSQTMAWILDEYSXFHGYSPAVVTGXAIDLGGSLGREAATGLGVFFGTEALLAEHGKSISI*NLLSRGL-ECGLLGKQIFHEHGGR 861
            MNALAATNRNF+ A+R+LGLDSKLE+SLLIPFREIKVEC+IPKDDG+LA+FVGFR+QHDNARGPMKGGIRYHPEV+PDEVNALAQLMTWKTAVA IPYGGAKGGIGC+P ELS+SELERLTRVFTQKIHDLIGIH DVPAPDMGT  QTMAWILDEYS FHG+SPAVVTG  IDLGGSLGR+AATG GV F TEALL EHGK+IS      +G    G    ++  + GG+
Sbjct:    1 MNALAATNRNFKLASRLLGLDSKLEKSLLIPFREIKVECTIPKDDGTLASFVGFRVQHDNARGPMKGGIRYHPEVEPDEVNALAQLMTWKTAVAKIPYGGAKGGIGCDPSELSLSELERLTRVFTQKIHDLIGIHTDVPAPDMGTGPQTMAWILDEYSKFHGHSPAVVTGKPIDLGGSLGRDAATGRGVLFATEALLNEHGKTISGQRFAIQGFGNVGSWAAKLISDKGGK 231          
BLAST of EY720830 vs. ExPASy Swiss-Prot
Match: DHE41_HALSA (NAD-specific glutamate dehydrogenase A OS=Halobacterium salinarium GN=gdhA PE=1 SV=1)

HSP 1 Score: 190.274 bits (482), Expect = 1.216e-47
Identity = 97/194 (50.00%), Postives = 125/194 (64.43%), Query Frame = 1
Query:  175 NALAATNRNFRYAARILGLDSKLERSLLIPFREIKVECSIPKDDGSLATFVGFRIQHDNARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVAAIPYGGAKGGIGCNPRELSMSELERLTRVFTQKIHDLIGIHRDVPAPDMGTNSQTMAWILDEYSXFHG-YSPAVVTGXAIDLGGSLGREAATGLGVFFGTE 753
            +AL    R   +AA  L +D  +   L  P +  +V   I +DDG++  F G+R QHD+ RGP KGG+RYHP+V  DE   L   MTWK AV  +P+GGAKGG+  NP+ELS  E ERLTR FTQ+I D+IG ++D+PAPDMGT+ QTMAW++D YS   G  +P VVTG    +GGS GRE A G  V   T+
Sbjct:   26 SALETARRQLYHAASYLDIDQNIVERLKYPKKVHEVTIPIERDDGTVEVFTGYRAQHDSVRGPYKGGLRYHPDVTRDECVGLGMWMTWKCAVMDLPFGGAKGGVAVNPKELSPEEKERLTRRFTQEIRDVIGPNQDIPAPDMGTDPQTMAWLMDAYSMQEGETTPGVVTGKPPVVGGSEGREEAPGRSVAIITQ 219          
BLAST of EY720830 vs. ExPASy Swiss-Prot
Match: DHE3_THEMA (Glutamate dehydrogenase OS=Thermotoga maritima GN=gdhA PE=1 SV=4)

HSP 1 Score: 184.111 bits (466), Expect = 8.712e-46
Identity = 93/180 (51.67%), Postives = 123/180 (68.33%), Query Frame = 1
Query:  202 FRYAARILGLDSKLERSLLIPFREIKVECSIPKDDGSLATFVGFRIQHDNARGPMKGGIRYHPEVDPDEVNALAQLMTWKTAVAAIPYGGAKGGIGCNPRELSMSELERLTRVFTQKIHDLIGIHRDVPAPDMGTNSQTMAWILDEYSXFHGYSP-AVVTGXAIDLGGSLGREAATGLGV 738
            F  AA ++ L+S L   L  P R + VE  +  DDG +  F G+R+QH+ ARGP KGGIRYHP+V  DEV ALA  MTWKTAV  +P+GG KGG+  +P++LS +ELERL+R F  +I  +IG + D+PAPD+ TN+  MAW +D YS   G++   +VTG  ++LGGS GRE ATG GV
Sbjct:   14 FNRAASLMDLESDLAEVLRRPKRVLIVEFPVRMDDGHVEVFTGYRVQHNVARGPAKGGIRYHPDVTLDEVKALAFWMTWKTAVMNLPFGGGKGGVRVDPKKLSRNELERLSRRFFSEIQVIIGPYNDIPAPDVNTNADVMAWYMDTYSMNVGHTVLGIVTGKPVELGGSKGREEATGRGV 193          
The following BLAST results are available for this feature:
BLAST of EY720830 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 80
Match NameE-valueIdentityDescription
DHE2_ARATH1.413e-10480.09Glutamate dehydrogenase 2 OS=Arabidopsis thaliana ... [more]
DHE3_SOLLC2.665e-10379.65Glutamate dehydrogenase OS=Solanum lycopersicum GN... [more]
DHE1_ARATH2.665e-10380.52Glutamate dehydrogenase 1 OS=Arabidopsis thaliana ... [more]
DHE3_VITVI7.753e-10380.52Glutamate dehydrogenase OS=Vitis vinifera GN=GDH P... [more]
DHEB_NICPL1.727e-10279.22Glutamate dehydrogenase B OS=Nicotiana plumbaginif... [more]
DHE3_MAIZE6.563e-10279.22Glutamate dehydrogenase OS=Zea mays GN=GDH1 PE=1 S... [more]
DHEA_NICPL3.257e-10178.79Glutamate dehydrogenase A OS=Nicotiana plumbaginif... [more]
DHE3_ARATH3.257e-10178.79Probable glutamate dehydrogenase 3 OS=Arabidopsis ... [more]
DHE41_HALSA1.216e-4750.00NAD-specific glutamate dehydrogenase A OS=Halobact... [more]
DHE3_THEMA8.712e-4651.67Glutamate dehydrogenase OS=Thermotoga maritima GN=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-014-H06-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720830 ID=EY720830; Name=EY720830; organism=Citrus sinensis; type=EST; length=861bp
CACGCGTCCGCAGTGGTGTCCTGCTGCATACATTGAGCCTTCCATATGCC
TACACCCCATTTGTTTATACAACTTTTTGCTTTATTATTTGTAGCTGACG
AGTTTTAATTTCACTTTCCTTTTGAGAATTCAGTTTCTTGTTTTCACTTT
TCAGTGTTTCGGTAGGCAGCCATGAATGCTCTTGCAGCCACCAACCGCAA
TTTTCGCTATGCAGCTCGAATTCTTGGGTTGGATTCTAAGCTTGAGAGAA
GCCTTTTAATACCCTTCAGAGAAATTAAAGTTGAATGCTCAATTCCGAAA
GATGATGGGTCGCTTGCAACCTTTGTTGGATTTAGAATCCAGCATGACAA
CGCCCGTGGCCCTATGAAAGGTGGAATCCGCTACCACCCGGAGGTTGACC
CGGATGAGGTGAATGCTTTGGCTCAACTGATGACATGGAAAACAGCTGTA
GCTGCTATTCCATATGGAGGAGCAAAGGGAGGGATTGGCTGCAATCCGAG
GGAGTTGAGTATGAGCGAGTTAGAACGTCTAACTCGCGTTTTCACTCAAA
AGATCCATGATCTTATTGGTATTCACAGGGATGTTCCTGCCCCTGACATG
GGAACTAATTCACAGACAATGGCATGGATCCTGGATGAATACTCANAATT
CCATGGGTACTCACCAGCAGTTGTTACCGGANAGGCAATTGATCTCGGGG
GATCACTCGGAAGGGAAGCTGCTACTGGACTTGGAGTGTTCTTTGGCACC
GAGGCTTTACTGGCTGAACATGGAAAATCAATTTCAATATGAAATTTGCT
ATCCAGGGGTTTGGAATGTGGGCTCCTGGGCAAGCAAATTTTCCATGAGC
ATGGGGGAAGG
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