EY720824

Overview
NameEY720824
Unique NameEY720824
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length881
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720824 vs. ExPASy Swiss-Prot
Match: MTHR2_ARATH (Methylenetetrahydrofolate reductase 2 OS=Arabidopsis thaliana GN=MTHFR2 PE=1 SV=2)

HSP 1 Score: 377.096 bits (967), Expect = 2.487e-106
Identity = 177/217 (81.57%), Postives = 193/217 (88.94%), Query Frame = 1
Query:  166 MKVIDKIQEKVASDKVVFSFEFFPPKTEDGVENLFERMDRMVAHNPAFCDITWGAGGSTADLTLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKXKVDAGARSIITHLFYDTDMFLKFVNDCRQIGIPAPL 816
            MKVIDKIQ      K  FSFEFFPPKTEDGV+NLFERMDRMVA+ P FCDITWGAGGSTADLTLDIA+RMQN +CVE+MMHLTCTNMPVEKIDHAL+TI+SNGIQNVLALRGDPPHGQDKFVQ++GGF CALDLV HIRS YGDYFGITVAGYPE HPD IG +G+ASNE+YQSDL YLK K+DAGA  I+T LFYDTD+FLKFVNDCRQIGI  P+
Sbjct:    1 MKVIDKIQSLADEGKTAFSFEFFPPKTEDGVDNLFERMDRMVAYGPTFCDITWGAGGSTADLTLDIASRMQNVVCVESMMHLTCTNMPVEKIDHALETIRSNGIQNVLALRGDPPHGQDKFVQVEGGFDCALDLVNHIRSKYGDYFGITVAGYPEAHPDVIGENGLASNEAYQSDLEYLKKKIDAGADLIVTQLFYDTDIFLKFVNDCRQIGISCPI 217          

HSP 2 Score: 30.8018 bits (68), Expect = 2.487e-106
Identity = 16/25 (64.00%), Postives = 18/25 (72.00%), Query Frame = 3
Query:  804 TCPIVLGICPLI-L*GFLRMTGFAK 875
            +CPIV GI P+    GFLRMTGF K
Sbjct:  214 SCPIVPGIMPINNYRGFLRMTGFCK 238          
BLAST of EY720824 vs. ExPASy Swiss-Prot
Match: MTHR1_MAIZE (Methylenetetrahydrofolate reductase 1 OS=Zea mays PE=2 SV=1)

HSP 1 Score: 369.007 bits (946), Expect = 2.288e-104
Identity = 173/217 (79.72%), Postives = 192/217 (88.48%), Query Frame = 1
Query:  166 MKVIDKIQEKVASDKVVFSFEFFPPKTEDGVENLFERMDRMVAHNPAFCDITWGAGGSTADLTLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKXKVDAGARSIITHLFYDTDMFLKFVNDCRQIGIPAPL 816
            MKVI+KI E     +  FSFE+FPPKTE+GVENLFERMDRMVAH P+FCDITWGAGGSTADLTL+IANRMQN +CVETMMHLTCTNMPVEKIDHAL+TIKSNGIQNVLALRGDPPHGQDKFVQ++GGFACALDLV+HIR+ YGDYFGITVAGYPE HPD I  +G A+ E+Y +DL YLK KVDAGA  I+T LFYDTD+FLKFVNDCRQIGI  P+
Sbjct:    1 MKVIEKILEAAGDGRTAFSFEYFPPKTEEGVENLFERMDRMVAHGPSFCDITWGAGGSTADLTLEIANRMQNMVCVETMMHLTCTNMPVEKIDHALETIKSNGIQNVLALRGDPPHGQDKFVQVEGGFACALDLVQHIRAKYGDYFGITVAGYPEAHPDAIQGEGGATLEAYSNDLAYLKRKVDAGADLIVTQLFYDTDIFLKFVNDCRQIGITCPI 217          

HSP 2 Score: 32.3426 bits (72), Expect = 2.288e-104
Identity = 17/25 (68.00%), Postives = 18/25 (72.00%), Query Frame = 3
Query:  804 TCPIVLGICPLI-L*GFLRMTGFAK 875
            TCPIV GI P+    GFLRMTGF K
Sbjct:  214 TCPIVPGIMPINNYKGFLRMTGFCK 238          
BLAST of EY720824 vs. ExPASy Swiss-Prot
Match: MTHR1_ARATH (Methylenetetrahydrofolate reductase 1 OS=Arabidopsis thaliana GN=MTHFR1 PE=1 SV=1)

HSP 1 Score: 371.703 bits (953), Expect = 3.894e-104
Identity = 174/217 (80.18%), Postives = 192/217 (88.48%), Query Frame = 1
Query:  166 MKVIDKIQEKVASDKVVFSFEFFPPKTEDGVENLFERMDRMVAHNPAFCDITWGAGGSTADLTLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKXKVDAGARSIITHLFYDTDMFLKFVNDCRQIGIPAPL 816
            MKV+DKI+      +  FSFEFFPPKTEDGVENLFERMDR+V++ P FCDITWGAGGSTADLTL+IA+RMQN ICVETMMHLTCTNMP+EKIDHAL+TI+SNGIQNVLALRGDPPHGQDKFVQ++GGFACALDLV HIRS YGDYFGITVAGYPE HPD I  DG+A+ ESYQSDL YLK KVDAGA  I+T LFYDTD+FLKFVNDCRQIGI  P+
Sbjct:    1 MKVVDKIKSVTEQGQTAFSFEFFPPKTEDGVENLFERMDRLVSYGPTFCDITWGAGGSTADLTLEIASRMQNVICVETMMHLTCTNMPIEKIDHALETIRSNGIQNVLALRGDPPHGQDKFVQVEGGFACALDLVNHIRSKYGDYFGITVAGYPEAHPDVIEADGLATPESYQSDLAYLKKKVDAGADLIVTQLFYDTDIFLKFVNDCRQIGINCPI 217          

HSP 2 Score: 28.8758 bits (63), Expect = 3.894e-104
Identity = 15/24 (62.50%), Postives = 16/24 (66.67%), Query Frame = 3
Query:  807 CPIVLGICPLI-L*GFLRMTGFAK 875
            CPIV GI P+    GFLRM GF K
Sbjct:  215 CPIVPGIMPISNYKGFLRMAGFCK 238          
BLAST of EY720824 vs. ExPASy Swiss-Prot
Match: MTHR_ORYSJ (Probable methylenetetrahydrofolate reductase OS=Oryza sativa subsp. japonica GN=Os03g0815200 PE=2 SV=1)

HSP 1 Score: 362.459 bits (929), Expect = 2.104e-102
Identity = 173/217 (79.72%), Postives = 189/217 (87.10%), Query Frame = 1
Query:  166 MKVIDKIQEKVASDKVVFSFEFFPPKTEDGVENLFERMDRMVAHNPAFCDITWGAGGSTADLTLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKXKVDAGARSIITHLFYDTDMFLKFVNDCRQIGIPAPL 816
            MKVI+KIQE  A  + VFSFE+FPPKTE+G++NLFERMDRMVAH P FCDITWGAGGSTADLTL+IANRMQN +CVETMMHLTCTNMPVEKID AL TIKSNGIQNVLALRGDPPHGQDKFVQ+ GGFACALDLV+HIR+ YGDYFGITVAGYPE HPD I     A+ E+Y +DL YLK KVDAGA  IIT LFYDTD+FLKFVNDCRQIGI  P+
Sbjct:    1 MKVIEKIQEAAADGRTVFSFEYFPPKTEEGLDNLFERMDRMVAHGPNFCDITWGAGGSTADLTLEIANRMQNMVCVETMMHLTCTNMPVEKIDDALTTIKSNGIQNVLALRGDPPHGQDKFVQVAGGFACALDLVQHIRAKYGDYFGITVAGYPEAHPDAIQSTEGATPEAYSNDLAYLKQKVDAGADLIITQLFYDTDIFLKFVNDCRQIGITCPI 217          

HSP 2 Score: 32.3426 bits (72), Expect = 2.104e-102
Identity = 17/25 (68.00%), Postives = 18/25 (72.00%), Query Frame = 3
Query:  804 TCPIVLGICPLI-L*GFLRMTGFAK 875
            TCPIV GI P+    GFLRMTGF K
Sbjct:  214 TCPIVPGIMPINNYKGFLRMTGFCK 238          
BLAST of EY720824 vs. ExPASy Swiss-Prot
Match: MTHR2_YEAST (Methylenetetrahydrofolate reductase 2 OS=Saccharomyces cerevisiae GN=MET13 PE=1 SV=2)

HSP 1 Score: 203.371 bits (516), Expect = 1.436e-51
Identity = 104/220 (47.27%), Postives = 141/220 (64.09%), Query Frame = 1
Query:  166 MKVIDKI-QEKVASDKVVFSFEFFPPKTEDGVENLFERMDRMV-AHNPAFCDITWGAGGST-ADLTLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKXKVDAGARSIITHLFYDTDMFLKFVNDCRQIGIPAPL 816
            MK+ +K+ Q +  S K  +SFE+F PKT  GV+NL++RMDRM  A  P F DITW AGG   + L+ D+    Q+ + +ET MHLTCTNMP+  ID AL+    +G QN+LALRGDPP   + +  ++GGF  A DL+K+I+S YGD+F I VAGYPE HP+         N+  + DL YLK K+DAG   IIT +FYD D F+ + +  R  G+  P+
Sbjct:    1 MKITEKLEQHRQTSGKPTYSFEYFVPKTTQGVQNLYDRMDRMYEASLPQFIDITWNAGGGRLSHLSTDLVATAQSVLGLETCMHLTCTNMPISMIDDALENAYHSGCQNILALRGDPPRDAENWTPVEGGFQYAKDLIKYIKSKYGDHFAIGVAGYPECHPE-------LPNKDVKLDLEYLKQKIDAGGDFIITQMFYDVDNFINWCSQVRAAGMDVPI 213          
BLAST of EY720824 vs. ExPASy Swiss-Prot
Match: MTHR1_SCHPO (Methylenetetrahydrofolate reductase 1 OS=Schizosaccharomyces pombe GN=met9 PE=1 SV=1)

HSP 1 Score: 188.734 bits (478), Expect = 3.661e-47
Identity = 102/219 (46.58%), Postives = 136/219 (62.10%), Query Frame = 1
Query:  166 MKVIDKIQEKVASDKVVFSFEFFPPKTEDGVENLFERMDRMVAHN-PAFCDITWGAGGSTADLTLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKXKVDAGARSIITHLFYDTDMFLKFVNDCRQIGIPAPLF 819
            MK+ DK+      +KV +S+EFFPPKT  GV+NL+ R+DRM     P F D+TWGAGG++++LT  I N +Q    V+T MHLTCTNM  E ID AL+     G +N+LALRGDP    D + + + GF  A DLV++IR+ Y D F I VAGYPEG+     PD     +     + +LK KVD GA  I+T +FYD D F+ +V+  R  GI  P+F
Sbjct:    1 MKISDKLLHPDWKEKVTYSYEFFPPKTSTGVQNLYNRIDRMKTWGRPMFVDVTWGAGGTSSELTPGIVNVIQTDFEVDTCMHLTCTNMSTEMIDAALKRAHETGCRNILALRGDPVKDTD-WTEGESGFRYASDLVRYIRTHYNDEFCIGVAGYPEGY----SPD-----DDIDESIKHLKLKVDEGADFIVTQMFYDVDNFIAWVDKVRAAGINIPIF 209          
BLAST of EY720824 vs. ExPASy Swiss-Prot
Match: MTHR_MACFA (Methylenetetrahydrofolate reductase OS=Macaca fascicularis GN=MTHFR PE=2 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 1.880e-43
Identity = 93/217 (42.86%), Postives = 131/217 (60.37%), Query Frame = 1
Query:  178 DKIQEKVASDKVVFSFEFFPPKTEDGVENLFERMDRMVAHNPAFCDITWGAGGSTAD----LTLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKXKVDAGARSIITHLFYDTDMFLKFVNDCRQIGIPAPL 816
            DK++ ++ S    FS EFFPP+T +G  NL  R DRM A  P F D+TW   G         ++ IA+   N   +ET++H+TC    +E+I   L   K  G++N++ALRGDP    D++ + +GGF  A+DLVKHIRS +GDYF + VAGYP+GHP+           S+++DL +LK KV AGA  IIT LF++ D F +FV  C  +GI  P+
Sbjct:   47 DKMRRRMESGDKWFSLEFFPPRTAEGAVNLISRFDRMAAGGPLFIDVTWHPAGDPGSDKETSSMMIASTAVNYCGLETILHMTCCCQRLEEITGHLHKAKQLGLKNIMALRGDPIG--DQWEEEEGGFNYAVDLVKHIRSEFGDYFDLCVAGYPKGHPEA---------GSFEADLKHLKEKVSAGADFIITQLFFEADTFFRFVKACTDMGITCPI 252          
BLAST of EY720824 vs. ExPASy Swiss-Prot
Match: MTHR_HUMAN (Methylenetetrahydrofolate reductase OS=Homo sapiens GN=MTHFR PE=1 SV=3)

HSP 1 Score: 175.637 bits (444), Expect = 3.207e-43
Identity = 92/217 (42.40%), Postives = 131/217 (60.37%), Query Frame = 1
Query:  178 DKIQEKVASDKVVFSFEFFPPKTEDGVENLFERMDRMVAHNPAFCDITWGAGGSTAD----LTLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKXKVDAGARSIITHLFYDTDMFLKFVNDCRQIGIPAPL 816
            +K++ ++ S    FS EFFPP+T +G  NL  R DRM A  P + D+TW   G         ++ IA+   N   +ET++H+TC    +E+I   L   K  G++N++ALRGDP    D++ + +GGF  A+DLVKHIRS +GDYF I VAGYP+GHP+           S+++DL +LK KV AGA  IIT LF++ D F +FV  C  +GI  P+
Sbjct:   47 EKMRRRLESGDKWFSLEFFPPRTAEGAVNLISRFDRMAAGGPLYIDVTWHPAGDPGSDKETSSMMIASTAVNYCGLETILHMTCCRQRLEEITGHLHKAKQLGLKNIMALRGDPIG--DQWEEEEGGFNYAVDLVKHIRSEFGDYFDICVAGYPKGHPEA---------GSFEADLKHLKEKVSAGADFIITQLFFEADTFFRFVKACTDMGITCPI 252          
BLAST of EY720824 vs. ExPASy Swiss-Prot
Match: MTHR_BOVIN (Methylenetetrahydrofolate reductase OS=Bos taurus GN=MTHFR PE=2 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 4.189e-43
Identity = 94/217 (43.32%), Postives = 131/217 (60.37%), Query Frame = 1
Query:  178 DKIQEKVASDKVVFSFEFFPPKTEDGVENLFERMDRMVAHNPAFCDITWGAGGSTAD----LTLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDPPHGQDKFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKXKVDAGARSIITHLFYDTDMFLKFVNDCRQIGIPAPL 816
            +K++ K+ S    FS EFFPP+T  G  NL  R DRM A  P F D+TW   G         ++ IA+   N   +ET++H+TC +   E+I   L   K  G++N+LALRGDP    D++ + +GGF  A DLVKHIR+ +GDYF + VAGYP+GHP+          ES+++DL +LK KV AGA  IIT LF++ + F +FV  C +IGI  P+
Sbjct:   46 EKMKRKMDSGDKWFSLEFFPPRTAQGAVNLISRFDRMGAGGPLFVDVTWHPAGDPGSDKETSSMVIASTAVNYCGLETILHMTCCHQSREEITGHLNKAKQLGLKNILALRGDPIG--DQWEEEEGGFNYATDLVKHIRNEFGDYFDVCVAGYPKGHPE---------GESFEADLKHLKEKVAAGADFIITQLFFEAETFFRFVKACSEIGITCPV 251          
BLAST of EY720824 vs. ExPASy Swiss-Prot
Match: MTHR1_YEAST (Methylenetetrahydrofolate reductase 1 OS=Saccharomyces cerevisiae GN=MET12 PE=1 SV=2)

HSP 1 Score: 175.252 bits (443), Expect = 4.189e-43
Identity = 98/203 (48.28%), Postives = 125/203 (61.58%), Query Frame = 1
Query:  220 SFEFFPPKTEDGVENLFERMDRMVAHNPAFCDITWGAGGSTADLTLDIANRMQNTICVETMMHLTCTNMPVEKIDHALQTIKSNGIQNVLALRGDPPHGQD--KFVQIQGGFACALDLVKHIRSAYGDYFGITVAGYPEGHPDTIGPDGVASNESYQSDLLYLKXKVDAGARSIITHLFYDTDMFLKFVNDCRQ-IGIPAPLF 819
            S EFFPPKTE G  NL ERM RM A +P F  +TWGAGG+TA+ TL +A+  Q T+ +   MHLTCTN     ID AL    + GI+N+LALRGDPP G+D       +  F  A+DLV++I+ +YGD F + VA YPEGH +    +     +    DL+YLK KV+AGA  +IT LFYD + FL F    R+ I    PLF
Sbjct:   16 SLEFFPPKTELGTRNLMERMHRMTALDPLFITVTWGAGGTTAEKTLTLASLAQQTLNIPVCMHLTCTNTEKAIIDDALDRCYNAGIRNILALRGDPPIGEDWLDSQSNESPFKYAVDLVRYIKQSYGDKFCVGVAAYPEGHCE---GEAEGHEQDPLKDLVYLKEKVEAGADFVITQLFYDVEKFLTFEMLFRERISQDLPLF 215          
The following BLAST results are available for this feature:
BLAST of EY720824 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
MTHR2_ARATH2.487e-10681.57Methylenetetrahydrofolate reductase 2 OS=Arabidops... [more]
MTHR1_MAIZE2.288e-10479.72Methylenetetrahydrofolate reductase 1 OS=Zea mays ... [more]
MTHR1_ARATH3.894e-10480.18Methylenetetrahydrofolate reductase 1 OS=Arabidops... [more]
MTHR_ORYSJ2.104e-10279.72Probable methylenetetrahydrofolate reductase OS=Or... [more]
MTHR2_YEAST1.436e-5147.27Methylenetetrahydrofolate reductase 2 OS=Saccharom... [more]
MTHR1_SCHPO3.661e-4746.58Methylenetetrahydrofolate reductase 1 OS=Schizosac... [more]
MTHR_MACFA1.880e-4342.86Methylenetetrahydrofolate reductase OS=Macaca fasc... [more]
MTHR_HUMAN3.207e-4342.40Methylenetetrahydrofolate reductase OS=Homo sapien... [more]
MTHR_BOVIN4.189e-4343.32Methylenetetrahydrofolate reductase OS=Bos taurus ... [more]
MTHR1_YEAST4.189e-4348.28Methylenetetrahydrofolate reductase 1 OS=Saccharom... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-014-G09-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720824 ID=EY720824; Name=EY720824; organism=Citrus sinensis; type=EST; length=881bp
CACGCGTCCGCCTCACCTCACACACCCACTCTCTTTTACTTTCATCTCGC
ATCCATTCTTTCCATTTTTCTTTTTCATAAATCACCCTCGCAGATCTGAA
CTCAACCGACAACTCACTCGTAAACGACCTGTCGGTGGCAGCAGTAGCTA
CTCTCCGAACCAAAAATGAAGGTAATAGACAAGATTCAAGAGAAAGTAGC
CTCCGACAAGGTCGTCTTCTCCTTCGAATTCTTCCCGCCGAAGACGGAAG
ATGGCGTGGAGAACTTGTTCGAGCGGATGGACCGCATGGTGGCCCACAAC
CCGGCATTCTGCGACATCACGTGGGGGGCGGGTGGCTCCACGGCCGATCT
GACTCTCGACATCGCGAACAGGATGCAGAACACGATATGCGTCGAGACGA
TGATGCATTTGACGTGCACGAACATGCCCGTCGAGAAGATCGATCACGCT
CTTCAGACTATTAAGTCCAACGGCATCCAGAACGTTCTCGCTCTTCGCGG
CGATCCTCCTCACGGTCAGGATAAGTTCGTTCAGATCCAGGGTGGCTTCG
CCTGCGCTCTTGATCTCGTGAAACATATTAGGTCTGCTTATGGTGATTAC
TTTGGCATCACTGTTGCTGGTTACCCAGAGGGACATCCGGATACCATTGG
ACCTGATGGCGTGGCCAGTAATGAATCATATCAAAGTGATCTTCTTTATC
TGAAGAANAAGGTGGATGCTGGTGCNAGATCTATTATCACTCACCTATTC
TATGATACTGACATGTTTCTTAAGTTTGTGAATGACTGTCGCCAAATTGG
AATACCTGCCCCATTGTTCTGGGAATTTGCCCATTAATACTATAAGGGTT
CTTGCGCATGACTGGCTTTGCAAAACAAGAT
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