EY720823
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY720823 vs. ExPASy Swiss-Prot
Match: DNLI4_ARATH (DNA ligase 4 OS=Arabidopsis thaliana GN=LIG4 PE=1 SV=1) HSP 1 Score: 367.466 bits (942), Expect = 5.589e-101 Identity = 186/290 (64.14%), Postives = 230/290 (79.31%), Query Frame = 3 Query: 3 RVREYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSMNLNNSVTHCVAADNKGA*YEAAKRRGDVIHYSWVLDCCSXXXXXXXXXXYYLHLSDSSKKKLQEELMNFLTCTFGILTL-XISTALNNV---DDPKNPNF*YFRKXTVTGPGSCFMA 860 R E+PK+APPSFYQVTN+SKERPDVWI+SPEKSIILSITSDIRTIRSEVF APYSLRFPRID+VRYDKPWH+CLDVQ+FVELV+SSNGTTQK KE QD+ PK +SS++GEKKNVS+VPS F+QTDVSDIKG+TSIFS+M+FYFVNVP ++SL++ HKMVVENGG FSMNLNNSVTHC+AA++ G Y+AAKR+ DVIH+SWVLDCCS Y+LHL+D+S+ KLQ+++ F + L L + L+N +D K+ ++ Y +K SC ++ Sbjct: 517 RKNEHPKKAPPSFYQVTNHSKERPDVWIDSPEKSIILSITSDIRTIRSEVFVAPYSLRFPRIDKVRYDKPWHECLDVQAFVELVNSSNGTTQKQKESESTQDN-PKVNKSSKRGEKKNVSLVPSQFIQTDVSDIKGKTSIFSNMIFYFVNVPRSHSLETFHKMVVENGGKFSMNLNNSVTHCIAAESSGIKYQAAKRQRDVIHFSWVLDCCSRNKMLPLLPKYFLHLTDASRTKLQDDIDEFSDSYYWDLDLEGLKQVLSNAKQSEDSKSIDY-YKKKLCPEKRWSCLLS 804
BLAST of EY720823 vs. ExPASy Swiss-Prot
Match: DNLI4_ORYSJ (Putative DNA ligase 4 OS=Oryza sativa subsp. japonica GN=LIG4 PE=2 SV=2) HSP 1 Score: 190.274 bits (482), Expect = 6.836e-49 Identity = 107/228 (46.93%), Postives = 130/228 (57.02%), Query Frame = 3 Query: 3 RVREYPKRAPPSFYQVTNNSKERPDVWIESPEK-----------------SIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSMNLNNSVTHCVAADNKGA*YEAAKRRGDVIHYSWVLDCC 635 R EYPK+ PP FY+VTN+SKERPDVWIESP+K S+I+SITSDIRTI+SEVF+APYSLRFPRI R+RYDKPWH+CLDVQ+FV++VHSSNGTT H D +D+K V+NGG+FSMNLN+SVTHC+AA+ K A R+G +IHYSW+LDCC Sbjct: 596 RKNEYPKK-PPRFYEVTNHSKERPDVWIESPDKQSVRFRKHLIYCITKCRSVIISITSDIRTIKSEVFAAPYSLRFPRIQRLRYDKPWHECLDVQAFVDIVHSSNGTT---------------------------------HRAADDDNDLKN----------------------------VKNGGSFSMNLNDSVTHCIAAEKK------ATRQGRIIHYSWILDCC 755 HSP 2 Score: 25.7942 bits (55), Expect = 6.836e-49 Identity = 6/22 (27.27%), Postives = 15/22 (68.18%), Query Frame = 2 Query: 701 KATRRVDEFSDLYFWDLDLAXI 766 K +D ++D ++WD+D++ + Sbjct: 776 KFPEEIDSYADYFYWDIDISDL 797
BLAST of EY720823 vs. ExPASy Swiss-Prot
Match: DNLI4_DICDI (DNA ligase 4 OS=Dictyostelium discoideum GN=lig4 PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 1.010e-17 Identity = 63/234 (26.92%), Postives = 115/234 (49.15%), Query Frame = 3 Query: 30 PPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELV--HSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVS----IVPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPA-YSLDSLHKMVVENGGTFSMNLNNSVTHCVAADNKGA*YEAAKRRG--DVIHYSWVLDCCSXXXXXXXXXXYYLHLSDSSKKK 704 PPS Q+ KE+PDVWI+ S +L I + + + ++ + Y+LRFPR+ ++R DK W DC + ++L +S+N ++ EYG K K+ + S+K + ++ V S F TD S I +IF + + Y+ L M+VE GG+ + + T+ V + + + + G D++ ++W++DC + Y + ++S+KK+ Sbjct: 696 PPSIIQLAEPFKEKPDVWIDPRVYSKVLQIKAS-QIVVTDKYKCGYTLRFPRVLKIRDDKGWKDCCSHEEIIDLFTNYSTNLNFKRDHEYGDGSGGKNKKLKKSKKTTNQLLADSGLKVLSIFQDTDTSGIIPTQNIFQGIEICVIKGSSGEYTKSKLEIMIVEMGGS-KVQYPSRNTNYVISSKEVVKIQNLIQSGFIDIVSFNWIVDCYNEKRLVPLGPKYMIFSTESTKKR 927
BLAST of EY720823 vs. ExPASy Swiss-Prot
Match: DNLI4_MOUSE (DNA ligase 4 OS=Mus musculus GN=Lig4 PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.319e-17 Identity = 58/238 (24.37%), Postives = 114/238 (47.90%), Query Frame = 3 Query: 9 REYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSMNLNNSVTHCVAADNKGA*YE--AAKRRGDVIHYSWVLDCCSXXXXXXXXXXYYLHLSDSSKKKLQEE 716 + + K++PPS E+P+V+IE P+ S+I+ I + + S+++ +LRFPRI+++R DK WH+C+ + +L ++G + G DD+P++ R + K + H ++S++ +++F D+ F ++ Y L + E GG N T+CV A ++ + + + DV+ W+L+C + +H+ S+K+ E Sbjct: 527 KPFHKKSPPSSILC---GTEKPEVYIE-PQNSVIVQIKA-AEIVPSDMYKTGSTLRFPRIEKIRDDKEWHECMTLGDLEQLRGKASGKLATKHLHVG-DDDEPREKRRKPISKTKKAIRIIEHLKAPNLSNVNKVSNVFEDVEFCVMSGLDGYPKADLENRIAEFGGYIVQNPGPD-TYCVIAGSENVRVKNIISSDKNDVVKPEWLLECFKTKTCVPWQPRFMIHMCPSTKQHFARE 757
BLAST of EY720823 vs. ExPASy Swiss-Prot
Match: DNLI4_PONAB (DNA ligase 4 OS=Pongo abelii GN=DNL4 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.249e-17 Identity = 60/238 (25.21%), Postives = 114/238 (47.90%), Query Frame = 3 Query: 9 REYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSMNLNNSVTHCVAADNKGA*YE--AAKRRGDVIHYSWVLDCCSXXXXXXXXXXYYLHLSDSSKKKLQEE 716 + + K+APPS E+P+V+IE P S+I+ I + + S+++ +LRFPRI+++R DK WH+C+ + +L ++G Y G DD+P++ + + K V + H +++++ ++IF D+ F ++ + L + E GG N T+CV A +K + + DV+ +W+L+C + +H+ S+K+ E Sbjct: 527 KPFHKKAPPSSILC---GTEKPEVYIE-PCNSVIVQIKA-AEIVPSDMYKTGCTLRFPRIEKIRDDKEWHECMTLDDLEQLRGKASGKLASKHFYVG-GDDEPQEKKRKAAPKMKKVIGIIEHLKAPNLTNVNKISNIFEDVEFCVMSGTDSQPKPDLENRIAEFGGYIVQNPGPD-TYCVIAGSKNIRVKNIILSNKHDVVKPAWLLECFKTKSFVPWQPHFMIHMCPSTKEHFARE 757
BLAST of EY720823 vs. ExPASy Swiss-Prot
Match: DNLI4_HUMAN (DNA ligase 4 OS=Homo sapiens GN=LIG4 PE=1 SV=2) HSP 1 Score: 86.6557 bits (213), Expect = 1.904e-16 Identity = 58/238 (24.37%), Postives = 114/238 (47.90%), Query Frame = 3 Query: 9 REYPKRAPPSFYQVTNNSKERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSMNLNNSVTHCVAADNKGA*YE--AAKRRGDVIHYSWVLDCCSXXXXXXXXXXYYLHLSDSSKKKLQEE 716 + + ++APPS E+P+V+IE P S+I+ I + + S+++ +LRFPRI+++R DK WH+C+ + +L ++G Y G DD+P++ + + K V + H +++++ ++IF D+ F ++ + L + E GG N T+CV A ++ + + DV+ +W+L+C + +H+ S+K+ E Sbjct: 527 KPFHRKAPPSSILC---GTEKPEVYIE-PCNSVIVQIKA-AEIVPSDMYKTGCTLRFPRIEKIRDDKEWHECMTLDDLEQLRGKASGKLASKHLYIG-GDDEPQEKKRKAAPKMKKVIGIIEHLKAPNLTNVNKISNIFEDVEFCVMSGTDSQPKPDLENRIAEFGGYIVQNPGPD-TYCVIAGSENIRVKNIILSNKHDVVKPAWLLECFKTKSFVPWQPRFMIHMCPSTKEHFARE 757
BLAST of EY720823 vs. ExPASy Swiss-Prot
Match: DNLI4_ASPFU (DNA ligase 4 OS=Aspergillus fumigatus GN=lig4 PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.234e-15 Identity = 64/213 (30.05%), Postives = 103/213 (48.36%), Query Frame = 3 Query: 18 PKRAPPSFYQVTNNSK--ERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFYFV---NVPPAYSLDSLHKMVVENGGTFSMNLNNSVTHCV-AADNKGA*YEAAKRRGDV--IHYSWVLDC 632 PK+ P ++ ++ ERPD+WI+ PE S+++ + + S+ F +LRFPR R+R DK W L VQ F++L + Q+ +E L D ++ R R +K V + + DV IF + FY + + P + L ++V NGG F NN+ H + AD + + ++RGDV I SW++DC Sbjct: 597 PKKPPTAYIELAGRDAQYERPDMWIK-PEDSVVICVKA-ASVSASDQFRLGLTLRFPRFKRLRMDKDWKSALSVQEFLDL---KSNVEQEHRE-KELNVDNSRRKRVKRTAKKP--LTVAGYDMDEDVKYAGPSGHIFDGLNFYILTDSSAPIKKTKPELEQLVKANGGMF-FQTNNAAPHTICVADRRTVKAASLQKRGDVDIIRPSWIIDC 800
BLAST of EY720823 vs. ExPASy Swiss-Prot
Match: DNLI4_ASPOR (DNA ligase 4 OS=Aspergillus oryzae GN=lig4 PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.750e-15 Identity = 61/215 (28.37%), Postives = 105/215 (48.84%), Query Frame = 3 Query: 12 EYPKRAPPSFYQVTNNSK---ERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFYFV---NVPPAYSLDSLHKMVVENGGTFSMNLNNSVTHCVAADNKGA*YEAAKRRGDV--IHYSWVLDC 632 E+ R PP+ Y ERPD+WI+ PE S++L + + + S+ F +LRFPR ++R DK W L VQ F++L +N ++ ++ + + + K+ +++ KK ++IV + + + +IF + FY N P S L ++V NGG F N + + AD + + ++ G+V I SW+LDC Sbjct: 591 EWKSRKPPTTYIELAGGDAQYERPDMWIK-PEDSVVLCVKAASVAV-SDQFRIGLTLRFPRFKKLRMDKDWKSALSVQEFLDL--KANAERERKEKEFNVDNSRKKR---AKRDNKKPLAIV-GYSAEAEAQYTGPSGNIFEGLNFYITTDSNTPVKKSKAELEQLVKANGGKFFQTSNAAPSTICIADRRTVKAASLQKSGNVNIIRPSWILDC 797
BLAST of EY720823 vs. ExPASy Swiss-Prot
Match: DNLI4_CHICK (DNA ligase 4 OS=Gallus gallus GN=LIG4 PE=2 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 3.591e-15 Identity = 55/219 (25.11%), Postives = 102/219 (46.58%), Query Frame = 3 Query: 66 ERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSRKGEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFYFVNVPPAYSLDSLHKMVVENGGTFSMNLNNSVTHC--VAADNKGA*YEAAKRRGDVIHYSWVLDCCSXXXXXXXXXXYYLHLSDSSKKKLQEE 716 E+P+++IE P S+I+ I + + S+++ +LRFPRI+++R DK W++C+ + L + G Y + D+P++ + + K V + F D+S++ +S+F D+ F + YS L + E GG+ N T+C V A+N A + DV+ W+L C + +H+S +++ E Sbjct: 548 EKPEMYIE-PCNSVIVQIKA-AEIVNSDMYKTDCTLRFPRIEKIREDKEWYECMTLDMLEHLRSRAEGKLASKHLYID-EYDEPQEKKRRTVPKVKKVIGIAEQFKAPDLSNVNKVSSMFEDVEFCVMTGMGRYSKSELESRIAECGGSVVQNPGPD-TYCVIVGAENVRVKNIIASNKYDVVKAEWLLQCFQSKMLVPWQPAFMIHMSPETREHFARE 762
BLAST of EY720823 vs. ExPASy Swiss-Prot
Match: DNLI4_EMENI (DNA ligase 4 OS=Emericella nidulans GN=lig4 PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.970e-13 Identity = 62/214 (28.97%), Postives = 102/214 (47.66%), Query Frame = 3 Query: 18 PKRAPPSFYQVTNNSK--ERPDVWIESPEKSIILSITSDIRTIRSEVFSAPYSLRFPRIDRVRYDKPWHDCLDVQSFVELVHSSNGTTQKGKEYGGLQDDKPKQFRSSR-KGEKKNVSIVPSHFLQTDVSDIKGETSIFSDMVFYFV---NVPPAYSLDSLHKMVVENGG-TFSMNLNNSVTHCVAADNKGA*YEAAKRRG--DVIHYSWVLDC 632 PK+ P ++ ++ ERPD+WI+ PE S+++ + + ++ S+ F +LRFPR R+R DK W L VQ F++L + Q+ +E ++ + FR R K K + + +V IF + F+ + N P S L +V NGG F N T C+ AD + + +++G D+I SW+LDC Sbjct: 591 PKKPPTTYIELAGGDSQYERPDMWIK-PEDSVVICVKAASVSV-SDQFRIGLTLRFPRFKRLRMDKDWKSALSVQEFLDL---KSHAEQEHRE----KEFNVENFRKKRVKKTTKKPLAIAGYDENAEVQYAGPSGHIFDGLNFFILTDSNAPVKKSKAELENLVKANGGRIFQTNDAVPDTICI-ADRRTVKAASLQKKGDIDIIRPSWILDC 794 The following BLAST results are available for this feature:
BLAST of EY720823 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 11
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY720823 ID=EY720823; Name=EY720823; organism=Citrus sinensis; type=EST; length=866bpback to top |