EY720805
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY720805 vs. ExPASy Swiss-Prot
Match: RK3_TOBAC (50S ribosomal protein L3, chloroplastic (Fragment) OS=Nicotiana tabacum GN=RPL3 PE=1 SV=1) HSP 1 Score: 371.703 bits (953), Expect = 2.998e-102 Identity = 184/235 (78.30%), Postives = 203/235 (86.38%), Query Frame = 2 Query: 32 TTKRTTTHI----VSMSYEAGIGVMGTKLGMMSYFEXXXXXXXXXXXXFREGNIVTQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKIRKLKIVKIDNDLRVVMIKGAVPG*PGNLLRVAPAKIVGKNIP 724 T K T+ HI +S S EAG+GVM TKLGMMS+FE FREGNIVTQ+KTEATDGY+AVQ+GYRRVRD+KLTKPE+GHL+KSG+IP+RHLQEFRLQSIDGFE QKL F E+F EGDLVDVSGTTIGKGFQGGIKRHNF+RG MTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGT RKIRKLKIVKID+ L ++MIKGA+PG PGNLLR+APAKIVGKNIP Sbjct: 23 THKPTSLHISKSSISASLEAGVGVMATKLGMMSFFEESGTVVPVTVVGFREGNIVTQIKTEATDGYNAVQVGYRRVRDRKLTKPEMGHLEKSGIIPLRHLQEFRLQSIDGFEVTQKLDFGELFKEGDLVDVSGTTIGKGFQGGIKRHNFKRGQMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTKRKIRKLKIVKIDDQLNIIMIKGALPGKPGNLLRIAPAKIVGKNIP 257
BLAST of EY720805 vs. ExPASy Swiss-Prot
Match: RK3A_ARATH (50S ribosomal protein L3-1, chloroplastic OS=Arabidopsis thaliana GN=RPL3A PE=1 SV=1) HSP 1 Score: 362.073 bits (928), Expect = 2.375e-99 Identity = 180/236 (76.27%), Postives = 197/236 (83.47%), Query Frame = 2 Query: 23 LIFTTKRTTTHIVSMSYEAGIGVMGTKLGMMSYFEXXXXXXXXXXXXFREGNIVTQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKIRKLKIVKIDNDLRVVMIKGAVPG*PGNLLRVAPAKIVGKNIPXN 730 L+ + T +VS S EAGIGVMG+KLGMMS+FE FREGNIVTQ+KT ATDGYDAVQIGYRRVRDKKLTKPE GHLQK+G IPMRHLQEFRL +I+GFE QKL F+EIF EGDLVDV+GTTIGKGFQGGIKRH+F+RG MTHGSKSHR LGSIGAGTTPGRVYKGKKMPGRMGGT KIRKLKIVK+D +L VVMIKGA+PG PGNLLR+ PAKIVG NIP N Sbjct: 36 LLIKSSPKTRFVVSSSMEAGIGVMGSKLGMMSFFEEDGTVVPVTVVGFREGNIVTQIKTLATDGYDAVQIGYRRVRDKKLTKPETGHLQKAGTIPMRHLQEFRLTNIEGFEPNQKLVFDEIFKEGDLVDVAGTTIGKGFQGGIKRHHFKRGQMTHGSKSHRALGSIGAGTTPGRVYKGKKMPGRMGGTRTKIRKLKIVKVDKELNVVMIKGALPGKPGNLLRITPAKIVGVNIPKN 271
BLAST of EY720805 vs. ExPASy Swiss-Prot
Match: RL3_CYAP7 (50S ribosomal protein L3 OS=Cyanothece sp. (strain PCC 7424) GN=rplC PE=3 SV=1) HSP 1 Score: 233.802 bits (595), Expect = 9.756e-61 Identity = 115/211 (54.50%), Postives = 150/211 (71.09%), Query Frame = 2 Query: 83 IGVMGTKLGMMSYFEXXXXXXXXXXXXFREGNIVTQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKIRKLKIVKIDNDLRVVMIKGAVPG*PGNLLRVAPAKIVGK 715 +G++GTKLGM F+ +TQVKT ATDGY+++QIGY V++K L KP+LGHL+KS P+RHL+E+RL++ ++ G + + +F GDLVDV+G TIG+GF G KRHNF+RG+MTHGSK+HR GS GAGTTPGRVY GK+M GR GGT IRKL +V+ID + +++IKGAVPG PGNLL + PAK VGK Sbjct: 3 VGILGTKLGMTQIFDKETGIAIPVTVIHAGPCPITQVKTPATDGYNSIQIGYGEVKEKALNKPKLGHLKKSASTPVRHLKEYRLENAADYQLGDGIKVD-LFKPGDLVDVAGKTIGRGFAGYQKRHNFKRGSMTHGSKNHRLPGSTGAGTTPGRVYPGKRMAGRYGGTQVTIRKLTVVQIDTERNLILIKGAVPGKPGNLLSITPAKTVGK 212
BLAST of EY720805 vs. ExPASy Swiss-Prot
Match: RL3_SYNP2 (50S ribosomal protein L3 OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=rplC PE=3 SV=1) HSP 1 Score: 232.261 bits (591), Expect = 2.839e-60 Identity = 113/211 (53.55%), Postives = 148/211 (70.14%), Query Frame = 2 Query: 83 IGVMGTKLGMMSYFEXXXXXXXXXXXXFREGNIVTQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKIRKLKIVKIDNDLRVVMIKGAVPG*PGNLLRVAPAKIVGK 715 +G++GTKLGM F+ VTQ+KT TDGY +VQIGY V++K LTKP+LGHL+K+ P+RHL+E+RL + G+E GQ + IF G +VDVSG TIG+GF G KRHNF+RG MTHGSK+HR GS GAGTTPGRVY GK+M GR GGT +RKL++V++D + +++IKGA+PG GNLL +AP+ IVG+ Sbjct: 3 LGILGTKLGMTQIFDNETGTAIPVTVVQAGPCTVTQIKTSETDGYTSVQIGYGDVKEKNLTKPQLGHLKKADAAPLRHLKEYRLDDVSGYELGQAIT-ANIFEAGQVVDVSGNTIGRGFAGYQKRHNFKRGNMTHGSKNHRLPGSTGAGTTPGRVYPGKRMAGRYGGTKITVRKLEVVRVDEEKNLLLIKGAIPGKAGNLLSIAPSNIVGQ 212
BLAST of EY720805 vs. ExPASy Swiss-Prot
Match: RL3_MICAN (50S ribosomal protein L3 OS=Microcystis aeruginosa (strain NIES-843) GN=rplC PE=3 SV=1) HSP 1 Score: 232.261 bits (591), Expect = 2.839e-60 Identity = 115/211 (54.50%), Postives = 149/211 (70.62%), Query Frame = 2 Query: 83 IGVMGTKLGMMSYFEXXXXXXXXXXXXFREGNIVTQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKIRKLKIVKIDNDLRVVMIKGAVPG*PGNLLRVAPAKIVGK 715 IG++GTKLGM F+ VTQVKT+ TDGY+++Q+GY+ V++K L KP LGHL K+G+ P+RHL E+RL+ + GQ++ +IF EGDLVDV+GTTIG+GF G KRHNF+RG MTHGSK+HR GS GAGTTPGRV+ GK+M G+ G T IRKL +VKID++ +++IKGAVPG PG LL + PAK GK Sbjct: 3 IGILGTKLGMTQIFDNKTGVAIPVTVVQAGPCPVTQVKTKKTDGYESIQVGYKTVKEKALNKPLLGHLAKAGVSPLRHLIEYRLEDASAYTLGQEIT-ADIFQEGDLVDVAGTTIGRGFSGYQKRHNFKRGNMTHGSKNHRLPGSTGAGTTPGRVFPGKRMAGQYGSTQVTIRKLSVVKIDSERNLILIKGAVPGKPGTLLNITPAKKFGK 212
BLAST of EY720805 vs. ExPASy Swiss-Prot
Match: RL3_ACAM1 (50S ribosomal protein L3 OS=Acaryochloris marina (strain MBIC 11017) GN=rplC PE=3 SV=1) HSP 1 Score: 228.794 bits (582), Expect = 3.139e-59 Identity = 114/213 (53.52%), Postives = 151/213 (70.89%), Query Frame = 2 Query: 83 IGVMGTKLGMMSYFEXXXXXXXXXXXXFREGNI-VTQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKIRKLKIVKIDNDLRVVMIKGAVPG*PGNLLRVAPAKIVGKN 718 +G++GTKLGM F+ + G VTQ+KT TDGY A+QIGY +K LT+PELGHL+KSG P+RHLQE+RL + +E GQ ++ ++F+EG LVD+SGT+IG+GF G KRHNFRRG M HGSK+HR GS GAGTTPGR+Y GK+M G+MG + IRKL +V++D + V++IKG+VPG PG LL + PA IVG++ Sbjct: 3 VGILGTKLGMTQVFDEAGRAIPVTVV--QAGPCPVTQIKTAQTDGYTAIQIGYGSTTEKALTRPELGHLKKSGSTPVRHLQEYRLADVSEYELGQSIS-ADLFSEGQLVDISGTSIGRGFAGYQKRHNFRRGPMGHGSKNHRAPGSTGAGTTPGRIYPGKRMAGQMGNVKKTIRKLTVVRVDAERNVLLIKGSVPGKPGALLNIQPATIVGES 212
BLAST of EY720805 vs. ExPASy Swiss-Prot
Match: RL3_CYAA5 (50S ribosomal protein L3 OS=Cyanothece sp. (strain ATCC 51142) GN=rplC PE=3 SV=1) HSP 1 Score: 223.787 bits (569), Expect = 1.010e-57 Identity = 110/211 (52.13%), Postives = 145/211 (68.72%), Query Frame = 2 Query: 83 IGVMGTKLGMMSYFEXXXXXXXXXXXXFREGNIVTQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKIRKLKIVKIDNDLRVVMIKGAVPG*PGNLLRVAPAKIVGK 715 +G++GTKLGM FE +TQ+KT TDGY A+QIGY V++K LTKPELGHL+K P+RHL+E+R+ + G+ + +IFN GDLVD++GT++G+GF G KRHNF+RG+MTHGSK+HR GS GAGTTPGRVY GKKM G+ G R L++V++D + +++IKGAVPG PG LL + PAKIVGK Sbjct: 3 VGLLGTKLGMTQIFEEESGLAIPVTVVQAGPCTITQIKTAETDGYSAIQIGYLEVKEKALTKPELGHLKKVEASPLRHLKEYRVDDTATYTLGEAVK-ADIFNAGDLVDIAGTSMGRGFAGYQKRHNFKRGSMTHGSKNHRLPGSTGAGTTPGRVYPGKKMAGQYGAVKTTTRHLQVVRVDAERNLLLIKGAVPGKPGGLLNITPAKIVGK 212
BLAST of EY720805 vs. ExPASy Swiss-Prot
Match: RL3_CYAP8 (50S ribosomal protein L3 OS=Cyanothece sp. (strain PCC 8801) GN=rplC PE=3 SV=1) HSP 1 Score: 222.246 bits (565), Expect = 2.938e-57 Identity = 109/211 (51.66%), Postives = 143/211 (67.77%), Query Frame = 2 Query: 83 IGVMGTKLGMMSYFEXXXXXXXXXXXXFREGNIVTQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKIRKLKIVKIDNDLRVVMIKGAVPG*PGNLLRVAPAKIVGK 715 +G++GTKLGM F+ VTQVKT TDGY A+Q+GY V++K LTK E+GHL+K P+RHL+E+RL ++ G + +IFN GDLVDVSG ++G+GF G KRHNF+RG MTHGSK+HR GS GAGTTPGRVY GK+M G+ G T IR L +V++D+D ++++KGA+PG PG LL + PAK VGK Sbjct: 3 VGILGTKLGMTQIFDQETGMAIPVTVVQAGPCTVTQVKTPDTDGYTAIQVGYHEVKEKALTKAEIGHLKKIDAPPLRHLKEYRLDDSSQYQLGDAIK-ADIFNPGDLVDVSGKSMGRGFAGYQKRHNFKRGNMTHGSKNHRLPGSTGAGTTPGRVYPGKRMAGQYGATQVTIRHLTVVRVDSDRNLILVKGAIPGKPGTLLNITPAKTVGK 212
BLAST of EY720805 vs. ExPASy Swiss-Prot
Match: RL3_THEEB (50S ribosomal protein L3 OS=Thermosynechococcus elongatus (strain BP-1) GN=rplC PE=3 SV=1) HSP 1 Score: 220.705 bits (561), Expect = 8.547e-57 Identity = 108/211 (51.18%), Postives = 146/211 (69.19%), Query Frame = 2 Query: 83 IGVMGTKLGMMSYFEXXXXXXXXXXXXFREGNIVTQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIPMRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKIRKLKIVKIDNDLRVVMIKGAVPG*PGNLLRVAPAKIVGK 715 +G++GTKLGM F+ I TQ+KT TDGY A+Q+ Y VR+K L++PE GHL KS PMRHL+EFRL+ + ++ GQ + + IF+ G LVDV GT+IG+GF G KRHNF+RG M HGSK+HR GS GAGTTPGRV+ GK+M GRMG T IRKL+++++D + +++IKGA+PG PG L+ + PAK+VG+ Sbjct: 3 VGILGTKLGMTQIFDEAGRSVPITVVQAGPCPI-TQIKTPQTDGYTAIQVAYGEVREKNLSRPERGHLNKSQTPPMRHLREFRLEDVSAYQLGQAITVD-IFSPGQLVDVRGTSIGRGFAGYQKRHNFKRGPMAHGSKNHRLPGSTGAGTTPGRVFPGKRMAGRMGNTAVTIRKLQVMRVDPERNLILIKGALPGKPGALVSITPAKVVGR 211
BLAST of EY720805 vs. ExPASy Swiss-Prot
Match: RK3_BIGNA (50S ribosomal protein L3, chloroplastic OS=Bigelowiella natans GN=RPL3 PE=2 SV=1) HSP 1 Score: 218.394 bits (555), Expect = 4.242e-56 Identity = 103/213 (48.36%), Postives = 146/213 (68.54%), Query Frame = 2 Query: 83 IGVMGTKLGMMSYFEXXXXXXXXXXXXFREGNIVTQVKTEATDGYDAVQIGYRRVRDKKLTKPELGHLQKSGLIP-MRHLQEFRLQSIDGFEAGQKLAFEEIFNEGDLVDVSGTTIGKGFQGGIKRHNFRRGAMTHGSKSHRQLGSIGAGTTPGRVYKGKKMPGRMGGTTRKIRKLKIVKIDNDLRVVMIKGAVPG*PGNLLRVAPAKIVGKN 718 +G+MGTK GM +Y++ GN+VTQVKT+ TDGYDAVQ+ Y+ RD+ + PE HL+K G + M+HL+EF++ + F GQ+L EE+F GDLVDVSGT+ GKGFQG I+R +RG M+HGSKSHRQ GSIG TP RVYKG KM GRMG + ++KL ++ ++++ + ++++G+VPG G ++ + P KIVGK+ Sbjct: 89 MGLMGTKAGMTTYYDDEGIAHPVTVIALEAGNVVTQVKTKETDGYDAVQLAYKETRDRTIPWPERQHLRKHGNVKAMKHLKEFKIADVSEFTPGQQLKAEELFEVGDLVDVSGTSSGKGFQGSIRRWGMKRGPMSHGSKSHRQHGSIGCSATPSRVYKGLKMAGRMGNERKTVKKLPVMMVNDEEKYIVVRGSVPGKKGTIVELRPTKIVGKH 301 The following BLAST results are available for this feature:
BLAST of EY720805 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY720805 ID=EY720805; Name=EY720805; organism=Citrus sinensis; type=EST; length=872bpback to top |