EY720799
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY720799 vs. ExPASy Swiss-Prot
Match: RPB2_ARATH (DNA-directed RNA polymerase II subunit RPB2 OS=Arabidopsis thaliana GN=RPB135 PE=2 SV=2) HSP 1 Score: 150.214 bits (378), Expect = 1.435e-35 Identity = 77/153 (50.33%), Postives = 99/153 (64.71%), Query Frame = 3 Query: 18 GTERLYDGRTGEMVRSLIFIGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSYQMHICRKCK--NVANVIQXXXXXXXXXXXPYCRICDSGDDIVKANVPYGAKLLCQELFSMGI 470 G ER+Y+G TG + ++IF+GPT+YQRL HM +DK+ R GPV LTRQP R R GG++FGEMERDC+IAHGAA L ERLF SD+Y++H+C C +AN+ + CR C + DIV+ +PY KLL QEL SM I Sbjct: 1029 GFERMYNGHTGRPLTAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCEVCGLIAIANLKKNSFE---------CRGCKNKTDIVQVYIPYACKLLFQELMSMAI 1172
BLAST of EY720799 vs. ExPASy Swiss-Prot
Match: RPB2_SOLLC (DNA-directed RNA polymerase II subunit RPB2 OS=Solanum lycopersicum GN=RPB2 PE=2 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.874e-35 Identity = 75/153 (49.02%), Postives = 100/153 (65.36%), Query Frame = 3 Query: 18 GTERLYDGRTGEMVRSLIFIGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSYQMHICRKCK--NVANVIQXXXXXXXXXXXPYCRICDSGDDIVKANVPYGAKLLCQELFSMGI 470 G E +Y+G TG + ++IF+GPT+YQRL HM +DK+ R GPV LTRQP R R GG++FGEMERDC+IAHGAA L ERLF SD+Y++H+C +C +AN+ + CR C + DIV+ ++PY KLL QEL +M I Sbjct: 1028 GFETMYNGHTGRRLSAMIFLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQSDAYRVHVCERCGLIAIANLKKNSFE---------CRGCKNKTDIVQVHIPYACKLLFQELMAMAI 1171
BLAST of EY720799 vs. ExPASy Swiss-Prot
Match: RPB2_CANGA (DNA-directed RNA polymerase II subunit RPB2 OS=Candida glabrata GN=RPB2 PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 2.072e-34 Identity = 74/152 (48.68%), Postives = 100/152 (65.79%), Query Frame = 3 Query: 18 GTERLYDGRTGEMVRSLIFIGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSYQMHICRKCKNVANVIQXXXXXXXXXXXPYCRICDSGDDIVKANVPYGAKLLCQELFSMGIT 473 G E +Y+G TG+ + + IF GPT+YQRL HM +DK+ R GP+ LTRQPV R R GG++FGEMERDC+IAHGAAA L ERL SD++++HIC C ++ + + C+ CD+ DI + ++PY AKLL QEL +M IT Sbjct: 1067 GFEVMYNGHTGKKLMAQIFFGPTYYQRLRHMVDDKIHARARGPMQVLTRQPVEGRSRDGGLRFGEMERDCMIAHGAAAFLKERLMEASDAFRVHICGICGLMSVIAKLNHNQFE------CKGCDNKIDIYQIHIPYAAKLLFQELMAMNIT 1212
BLAST of EY720799 vs. ExPASy Swiss-Prot
Match: RPB2_YEAST (DNA-directed RNA polymerase II subunit RPB2 OS=Saccharomyces cerevisiae GN=RPB2 PE=1 SV=2) HSP 1 Score: 144.821 bits (364), Expect = 6.029e-34 Identity = 73/152 (48.03%), Postives = 99/152 (65.13%), Query Frame = 3 Query: 18 GTERLYDGRTGEMVRSLIFIGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSYQMHICRKCKNVANVIQXXXXXXXXXXXPYCRICDSGDDIVKANVPYGAKLLCQELFSMGIT 473 G E +Y+G TG+ + + IF GPT+YQRL HM +DK+ R GP+ LTRQPV R R GG++FGEMERDC+IAHGAA+ L ERL SD++++HIC C + + + C+ CD+ DI + ++PY AKLL QEL +M IT Sbjct: 1068 GFEVMYNGHTGKKLMAQIFFGPTYYQRLRHMVDDKIHARARGPMQVLTRQPVEGRSRDGGLRFGEMERDCMIAHGAASFLKERLMEASDAFRVHICGICGLMTVIAKLNHNQFE------CKGCDNKIDIYQIHIPYAAKLLFQELMAMNIT 1213
BLAST of EY720799 vs. ExPASy Swiss-Prot
Match: RPB2_DICDI (DNA-directed RNA polymerase II subunit rpb2 OS=Dictyostelium discoideum GN=polr2b PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 6.029e-34 Identity = 78/153 (50.98%), Postives = 98/153 (64.05%), Query Frame = 3 Query: 18 GTERLYDGRTGEMVRSLIFIGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSYQMHICRKCK--NVANVIQXXXXXXXXXXXPYCRICDSGDDIVKANVPYGAKLLCQELFSMGI 470 G E +Y+G TG + + IFIGPT+YQRL HM +DK+ R+ GPV LTRQPV R R GG++FGEMERDC+I+HGAA L ERLF SDSY++HIC C +AN+ + CR C + I + +PY AKLL QEL SM I Sbjct: 1019 GHEVMYNGHTGRRMDAQIFIGPTYYQRLKHMVDDKIHSRSRGPVQILTRQPVEGRSRDGGLRFGEMERDCMISHGAAQFLKERLFDQSDSYRVHICDICGLIAIANLKKNSFE---------CRRCKNKTQISQIRMPYAAKLLFQELMSMSI 1162
BLAST of EY720799 vs. ExPASy Swiss-Prot
Match: RPB2_ASHGO (DNA-directed RNA polymerase II subunit RPB2 OS=Ashbya gossypii GN=RPB2 PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.754e-33 Identity = 74/151 (49.01%), Postives = 97/151 (64.24%), Query Frame = 3 Query: 18 GTERLYDGRTGEMVRSLIFIGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSYQMHICRKCKNVANVIQXXXXXXXXXXXPYCRICDSGDDIVKANVPYGAKLLCQELFSMGI 470 G E +Y+G TG+ + + IF GPT+YQRL HM +DK+ R GP+ LTRQPV R R GG++FGEMERDC+IAHGAAA L ERL SD++++HIC C + V + CR C + DI + ++PY AKLL QEL +M I Sbjct: 1066 GFEVMYNGHTGKKLMAQIFFGPTYYQRLRHMVDDKIHARARGPMQVLTRQPVEGRSRDGGLRFGEMERDCMIAHGAAAFLKERLMEASDAFRVHICGICGLMTVVAKLKHNQFE------CRGCKNKIDIYQVHIPYAAKLLFQELMAMNI 1210
BLAST of EY720799 vs. ExPASy Swiss-Prot
Match: RPB2_PICGU (DNA-directed RNA polymerase II subunit RPB2 OS=Pichia guilliermondii GN=RPB2 PE=3 SV=3) HSP 1 Score: 141.739 bits (356), Expect = 5.104e-33 Identity = 73/164 (44.51%), Postives = 101/164 (61.59%), Query Frame = 3 Query: 18 GTERLYDGRTGEMVRSLIFIGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSYQMHICRKCKNVANVIQXXXXXXXXXXXPYCRICDSGDDIVKANVPYGAKLLCQELFSMGITLKFDAECC*VSM 509 G E +Y G TG+ + + +F GPT+YQRL HM +DK+ R GPV LTRQPV R R GG++FGEMERDC+IAHGAA L ERL SD++++H+C C ++ + CR C + +I + ++PY AKLL QEL +M I+ + E VS+ Sbjct: 1077 GFEVMYHGHTGKKLMAQVFFGPTYYQRLRHMVDDKIHARARGPVQVLTRQPVEGRSRDGGLRFGEMERDCMIAHGAAGFLKERLMEASDAFRVHVCGVCGLMSVIANLKKNQFE------CRSCKNKTNIYQIHIPYAAKLLFQELMAMNISPRLYTERSGVSV 1234
BLAST of EY720799 vs. ExPASy Swiss-Prot
Match: RPB2_MOUSE (DNA-directed RNA polymerase II subunit RPB2 OS=Mus musculus GN=Polr2b PE=2 SV=2) HSP 1 Score: 139.813 bits (351), Expect = 1.939e-32 Identity = 75/151 (49.67%), Postives = 89/151 (58.94%), Query Frame = 3 Query: 18 GTERLYDGRTGEMVRSLIFIGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSYQMHICRKCKNVANVIQXXXXXXXXXXXPYCRICDSGDDIVKANVPYGAKLLCQELFSMGI 470 G E LY+G TG + S IFIGPT+YQRL HM +DK+ R GP+ L RQP+ R R GG++FGEMERDC IAHGAA L ERLF SD YQ+H+C C +A CR C + I +PY KLL QEL SM I Sbjct: 1024 GNEVLYNGFTGRKITSQIFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSRDGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGIMA-------IANTRTHTYECRGCRNKTQISLVRMPYACKLLFQELMSMSI 1167
BLAST of EY720799 vs. ExPASy Swiss-Prot
Match: RPB2_HUMAN (DNA-directed RNA polymerase II subunit RPB2 OS=Homo sapiens GN=POLR2B PE=1 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.939e-32 Identity = 75/151 (49.67%), Postives = 89/151 (58.94%), Query Frame = 3 Query: 18 GTERLYDGRTGEMVRSLIFIGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSYQMHICRKCKNVANVIQXXXXXXXXXXXPYCRICDSGDDIVKANVPYGAKLLCQELFSMGI 470 G E LY+G TG + S IFIGPT+YQRL HM +DK+ R GP+ L RQP+ R R GG++FGEMERDC IAHGAA L ERLF SD YQ+H+C C +A CR C + I +PY KLL QEL SM I Sbjct: 1024 GNEVLYNGFTGRKITSQIFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSRDGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGIMA-------IANTRTHTYECRGCRNKTQISLVRMPYACKLLFQELMSMSI 1167
BLAST of EY720799 vs. ExPASy Swiss-Prot
Match: RPB2_DROME (DNA-directed RNA polymerase II subunit RPB2 OS=Drosophila melanogaster GN=RpII140 PE=2 SV=2) HSP 1 Score: 138.658 bits (348), Expect = 4.321e-32 Identity = 71/151 (47.02%), Postives = 92/151 (60.93%), Query Frame = 3 Query: 18 GTERLYDGRTGEMVRSLIFIGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSYQMHICRKCKNVANVIQXXXXXXXXXXXPYCRICDSGDDIVKANVPYGAKLLCQELFSMGI 470 G E +Y+G TG + + +F+GPT+YQRL HM +DK+ R GPV L RQP+ R R GG++FGEMERDC I+HGAA L ERLF +SD Y++HIC C +A C+ C + I + +PY AKLL QEL SM I Sbjct: 1026 GNEVMYNGHTGRKINAQVFLGPTYYQRLKHMVDDKIHSRARGPVQILVRQPMEGRARDGGLRFGEMERDCQISHGAAQFLRERLFEVSDPYRVHICNFCGLIA-------IANLRNNTFECKGCKNKTQISQVRLPYAAKLLFQELMSMNI 1169 The following BLAST results are available for this feature:
BLAST of EY720799 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >EY720799 ID=EY720799; Name=EY720799; organism=Citrus sinensis; type=EST; length=879bpback to top |