EY720797

Overview
NameEY720797
Unique NameEY720797
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length880
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720797 vs. ExPASy Swiss-Prot
Match: UBC13_ARATH (Ubiquitin-conjugating enzyme E2 13 OS=Arabidopsis thaliana GN=UBC13 PE=2 SV=1)

HSP 1 Score: 275.018 bits (702), Expect = 3.885e-73
Identity = 126/140 (90.00%), Postives = 135/140 (96.43%), Query Frame = 2
Query:   11 AGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVESIVLSIISMLSGPNDESPANVEAAKEWRDRRDDFKKKVGRCVRRSQEM 430
            AGLVDE NIFEWSVTIIGPPDTLYEGGFF AIMSFP NYPNSPPTV+FT++IWHPNVYPDGRVCISILHPPGDDP+GYELASERW PVHTVESI+LSIISMLSGPNDESPANVEAAKEWR++RD+FKKKV RCVR+SQEM
Sbjct:   26 AGLVDEKNIFEWSVTIIGPPDTLYEGGFFYAIMSFPQNYPNSPPTVRFTSDIWHPNVYPDGRVCISILHPPGDDPSGYELASERWTPVHTVESIMLSIISMLSGPNDESPANVEAAKEWREKRDEFKKKVSRCVRKSQEM 165          
BLAST of EY720797 vs. ExPASy Swiss-Prot
Match: UBC7_ARATH (Ubiquitin-conjugating enzyme E2 7 OS=Arabidopsis thaliana GN=UBC7 PE=2 SV=1)

HSP 1 Score: 274.248 bits (700), Expect = 6.626e-73
Identity = 125/140 (89.29%), Postives = 135/140 (96.43%), Query Frame = 2
Query:   11 AGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVESIVLSIISMLSGPNDESPANVEAAKEWRDRRDDFKKKVGRCVRRSQEM 430
            AGLVDE NIFEWSVTIIGPPDTLYEGGFFNAIM+FP NYPNSPPTV+FT+++WHPNVY DGRVCISILHPPGDDP+GYELASERW PVHTVESI+LSIISMLSGPNDESPANVEAAKEWRD+RD+FKKKV RCVR+SQEM
Sbjct:   26 AGLVDEKNIFEWSVTIIGPPDTLYEGGFFNAIMTFPQNYPNSPPTVRFTSDMWHPNVYSDGRVCISILHPPGDDPSGYELASERWTPVHTVESIMLSIISMLSGPNDESPANVEAAKEWRDKRDEFKKKVSRCVRKSQEM 165          
BLAST of EY720797 vs. ExPASy Swiss-Prot
Match: UBC14_ARATH (Ubiquitin-conjugating enzyme E2 14 OS=Arabidopsis thaliana GN=UBC14 PE=2 SV=1)

HSP 1 Score: 265.388 bits (677), Expect = 3.078e-70
Identity = 122/141 (86.52%), Postives = 132/141 (93.62%), Query Frame = 2
Query:   11 AGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVESIVLSIISMLSGPNDESPANVEAAKEWRDRRDDFKKKVGRCVRRSQEML 433
            AGLVDE N+F+WSV+I+GPPDTLYEGGFFNAIMSFP NYP SPPTV FT+E+WHPNVY DG+VCISILHPPGDDP+GYELASERW PVHTVESIVLSIISMLSGPNDESPANVEAAKEWRD R +F+KKV RCVRRSQEML
Sbjct:   27 AGLVDEKNVFQWSVSIMGPPDTLYEGGFFNAIMSFPENYPVSPPTVTFTSEMWHPNVYSDGKVCISILHPPGDDPHGYELASERWTPVHTVESIVLSIISMLSGPNDESPANVEAAKEWRDNRAEFRKKVSRCVRRSQEML 167          
BLAST of EY720797 vs. ExPASy Swiss-Prot
Match: UBC7_WHEAT (Ubiquitin-conjugating enzyme E2 7 OS=Triticum aestivum GN=UBC7 PE=2 SV=1)

HSP 1 Score: 257.684 bits (657), Expect = 6.418e-68
Identity = 116/140 (82.86%), Postives = 132/140 (94.29%), Query Frame = 2
Query:   14 GLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVESIVLSIISMLSGPNDESPANVEAAKEWRDRRDDFKKKVGRCVRRSQEML 433
            G VD++N+FEW VTIIGPP+TLY+GG+FNAIMSFP NYPNSPPTV+FT+E+WHPNVYPDGRVCISI HPPGDDPNGYELASERW PVHTVESIVLSIISMLS PNDESPAN+EAAK+WR+++D+FKKKV R VR+SQEML
Sbjct:   30 GFVDDSNVFEWQVTIIGPPETLYDGGYFNAIMSFPQNYPNSPPTVRFTSEMWHPNVYPDGRVCISI-HPPGDDPNGYELASERWTPVHTVESIVLSIISMLSSPNDESPANIEAAKDWREKQDEFKKKVRRAVRKSQEML 168          
BLAST of EY720797 vs. ExPASy Swiss-Prot
Match: UBC15_SCHPO (Ubiquitin-conjugating enzyme E2 15 OS=Schizosaccharomyces pombe GN=ubc15 PE=2 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 6.231e-55
Identity = 97/140 (69.29%), Postives = 118/140 (84.29%), Query Frame = 2
Query:   14 GLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVESIVLSIISMLSGPNDESPANVEAAKEWRDRRDDFKKKVGRCVRRSQEML 433
            GLVD+ +IFEW V IIGP DTLYEGGFF+A +SFP +YP  PP +KFTTEIWHPNV+P+G VCISILHPPGDD  GYE A ERW+PVH+ E+I++S+ISMLS PNDESPAN++AAKE+R+   +FKK+V R VRRS EM+
Sbjct:   28 GLVDDKSIFEWEVMIIGPEDTLYEGGFFHATLSFPQDYPLMPPKMKFTTEIWHPNVHPNGEVCISILHPPGDDKYGYEDAGERWLPVHSPETILISVISMLSSPNDESPANIDAAKEFRENPQEFKKRVRRLVRRSIEMI 167          
BLAST of EY720797 vs. ExPASy Swiss-Prot
Match: UBC7_CAEEL (Probable ubiquitin-conjugating enzyme E2 7 OS=Caenorhabditis elegans GN=ubc-7 PE=1 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 1.100e-51
Identity = 92/139 (66.19%), Postives = 112/139 (80.58%), Query Frame = 2
Query:   11 AGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVESIVLSIISMLSGPNDESPANVEAAKEWRDRRDDFKKKVGRCVRRSQE 427
            AGLVD+ +I++W V +IGPPDTLYEGGFF AI+ FP +YP  PP +KF +EIWHPN+  +G VCISILH PGDD  GYE   ERW+PVHTVE+I+LS+ISML+ PN ESPANV+AAK  R+   +FKKKV +CVRRSQE
Sbjct:   25 AGLVDDNDIYKWEVLVIGPPDTLYEGGFFKAILDFPRDYPQKPPKMKFISEIWHPNIDKEGNVCISILHDPGDDKWGYERPEERWLPVHTVETILLSVISMLTDPNFESPANVDAAKMQRENYAEFKKKVAQCVRRSQE 163          
BLAST of EY720797 vs. ExPASy Swiss-Prot
Match: UB2G1_RAT (Ubiquitin-conjugating enzyme E2 G1 OS=Rattus norvegicus GN=Ube2g1 PE=2 SV=3)

HSP 1 Score: 201.83 bits (512), Expect = 4.179e-51
Identity = 90/140 (64.29%), Postives = 113/140 (80.71%), Query Frame = 2
Query:   11 AGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVESIVLSIISMLSGPNDESPANVEAAKEWR-DRRDDFKKKVGRCVRRSQE 427
            AGL+D+ +++ W V IIGPPDTLYEGG F A ++FP +YP  PP +KF TEIWHPNV  +G VCISILH PG+D  GYE   ERW+P+HTVE+I++S+ISML+ PN +SPANV+AAKEWR DR  +FK+KV RCVR+SQE
Sbjct:   27 AGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWREDRNGEFKRKVARCVRKSQE 166          
BLAST of EY720797 vs. ExPASy Swiss-Prot
Match: UB2G1_MOUSE (Ubiquitin-conjugating enzyme E2 G1 OS=Mus musculus GN=Ube2g1 PE=2 SV=3)

HSP 1 Score: 201.83 bits (512), Expect = 4.179e-51
Identity = 90/140 (64.29%), Postives = 113/140 (80.71%), Query Frame = 2
Query:   11 AGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVESIVLSIISMLSGPNDESPANVEAAKEWR-DRRDDFKKKVGRCVRRSQE 427
            AGL+D+ +++ W V IIGPPDTLYEGG F A ++FP +YP  PP +KF TEIWHPNV  +G VCISILH PG+D  GYE   ERW+P+HTVE+I++S+ISML+ PN +SPANV+AAKEWR DR  +FK+KV RCVR+SQE
Sbjct:   27 AGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWREDRNGEFKRKVARCVRKSQE 166          
BLAST of EY720797 vs. ExPASy Swiss-Prot
Match: UB2G1_HUMAN (Ubiquitin-conjugating enzyme E2 G1 OS=Homo sapiens GN=UBE2G1 PE=1 SV=3)

HSP 1 Score: 201.83 bits (512), Expect = 4.179e-51
Identity = 90/140 (64.29%), Postives = 113/140 (80.71%), Query Frame = 2
Query:   11 AGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVESIVLSIISMLSGPNDESPANVEAAKEWR-DRRDDFKKKVGRCVRRSQE 427
            AGL+D+ +++ W V IIGPPDTLYEGG F A ++FP +YP  PP +KF TEIWHPNV  +G VCISILH PG+D  GYE   ERW+P+HTVE+I++S+ISML+ PN +SPANV+AAKEWR DR  +FK+KV RCVR+SQE
Sbjct:   27 AGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEERWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWREDRNGEFKRKVARCVRKSQE 166          
BLAST of EY720797 vs. ExPASy Swiss-Prot
Match: UB2G1_MACFA (Ubiquitin-conjugating enzyme E2 G1 OS=Macaca fascicularis GN=UBE2G1 PE=2 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 2.709e-50
Identity = 89/140 (63.57%), Postives = 112/140 (80.00%), Query Frame = 2
Query:   11 AGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVESIVLSIISMLSGPNDESPANVEAAKEWR-DRRDDFKKKVGRCVRRSQE 427
            AGL+D+ +++ W V IIGPPDTLYEGG F A ++FP +YP  PP +KF TEIWHPNV  +G VCISILH PG+D  GYE    RW+P+HTVE+I++S+ISML+ PN +SPANV+AAKEWR DR  +FK+KV RCVR+SQE
Sbjct:   27 AGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVDKNGDVCISILHEPGEDKYGYEKPEGRWLPIHTVETIMISVISMLADPNGDSPANVDAAKEWREDRNGEFKRKVARCVRKSQE 166          
The following BLAST results are available for this feature:
BLAST of EY720797 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 212
Match NameE-valueIdentityDescription
UBC13_ARATH3.885e-7390.00Ubiquitin-conjugating enzyme E2 13 OS=Arabidopsis ... [more]
UBC7_ARATH6.626e-7389.29Ubiquitin-conjugating enzyme E2 7 OS=Arabidopsis t... [more]
UBC14_ARATH3.078e-7086.52Ubiquitin-conjugating enzyme E2 14 OS=Arabidopsis ... [more]
UBC7_WHEAT6.418e-6882.86Ubiquitin-conjugating enzyme E2 7 OS=Triticum aest... [more]
UBC15_SCHPO6.231e-5569.29Ubiquitin-conjugating enzyme E2 15 OS=Schizosaccha... [more]
UBC7_CAEEL1.100e-5166.19Probable ubiquitin-conjugating enzyme E2 7 OS=Caen... [more]
UB2G1_RAT4.179e-5164.29Ubiquitin-conjugating enzyme E2 G1 OS=Rattus norve... [more]
UB2G1_MOUSE4.179e-5164.29Ubiquitin-conjugating enzyme E2 G1 OS=Mus musculus... [more]
UB2G1_HUMAN4.179e-5164.29Ubiquitin-conjugating enzyme E2 G1 OS=Homo sapiens... [more]
UB2G1_MACFA2.709e-5063.57Ubiquitin-conjugating enzyme E2 G1 OS=Macaca fasci... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-703-014-D07-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720797 ID=EY720797; Name=EY720797; organism=Citrus sinensis; type=EST; length=880bp
CACGCGTCCGGCCGGGTTGGTGGATGAGACAAATATCTTTGAATGGAGTG
TTACAATTATTGGACCACCTGATACTCTTTATGAGGGGGGATTTTTCAAT
GCCATTATGAGCTTTCCATCAAACTACCCTAATAGCCCACCTACAGTGAA
GTTTACAACAGAGATTTGGCATCCTAATGTCTATCCGGATGGGCGTGTCT
GCATATCAATCCTTCATCCTCCAGGTGACGACCCTAATGGATATGAGCTT
GCAAGTGAGCGCTGGATGCCTGTTCATACTGTTGAAAGTATCGTTTTGAG
TATCATATCAATGCTTTCCGGTCCTAATGATGAATCTCCTGCAAATGTCG
AAGCTGCAAAAGAATGGAGAGACAGGAGAGATGACTTCAAGAAGAAAGTA
GGCCGCTGTGTGAGAAGATCACAAGAAATGTTGTAATCCAACTGCAGGCA
CTCTTTTTTTCTCTACCTATGTGTTTGTACGGGAAATGTCTTGATTTAAT
TGTGTGGGGGGAACTGGGTTCTGTGGGTAATGTCCATGTGCTTGGTCTTG
TGTACACTGGCATTATGAAGTACTCTCAACCATCTCTCTCGGTTTCTCTG
CATGGTCAAGTCACTGTAACGACTGGGAAACTCCATGTATTCCAGAAGCG
TCTTTGGTTAGTTTTAGTCCCAAATGTTCTGTCATGCACTTTAAAAAAAA
AAAATAAAAAAGGGCGGCCCGCCAAAGGGTCCAACTTTACTACGCCGTGC
TGCGAAATCCTAGCACTCCTATATGGCCCCAAAGTCCGTCCGCTGGCCGG
CTGTTACAACGCCAGAGGCGGGAAAAGCCGGGCCTCCCCCGACGACTCCC
CTCGCGCACTCCCCCTTTCCTCCGCGGGCT
back to top