EY720792

Overview
NameEY720792
Unique NameEY720792
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length888
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720792 vs. ExPASy Swiss-Prot
Match: BGAL_THEMA (Beta-galactosidase OS=Thermotoga maritima GN=lacZ PE=3 SV=2)

HSP 1 Score: 129.028 bits (323), Expect = 4.373e-36
Identity = 57/110 (51.82%), Postives = 74/110 (67.27%), Query Frame = 1
Query:  127 SLSGHWKFFLASSPPDVPLNFHKSSFQDSKWEAIPVPSNWQMHGFDRPIYTNVVYPFPLDPPNVPA-ENPTGCYRTYFHIPKEWQGRRILLHFEAVDSAFCAWINGVPCG 453
            SL+G+W+F  A +P +VP +F    F DS W+ I VPSNW+M G+ +PIYTNVVYPF  +PP VP  +NPTG YR +  IP++W  + I LHFE V S F  W+NG   G
Sbjct:   41 SLNGNWRFLFAKNPFEVPEDFFSEKFDDSNWDEIEVPSNWEMKGYGKPIYTNVVYPFEPNPPFVPKDDNPTGVYRRWIEIPEDWFKKEIFLHFEGVRSFFYLWVNGKKIG 150          

HSP 2 Score: 43.8986 bits (102), Expect = 4.373e-36
Identity = 19/47 (40.43%), Postives = 30/47 (63.83%), Query Frame = 2
Query:  440 GFPVGYSQDSRLPAEFEIADYCYPHGSDKKNVLTIQIFRWIDGPYLK 580
            G  +G+S+DS  PAEF + D   P     KN++T+++ +W DG YL+
Sbjct:  146 GKKIGFSKDSCTPAEFRLTDVLRPG----KNLITVEVLKWSDGSYLE 188          
BLAST of EY720792 vs. ExPASy Swiss-Prot
Match: BGAL_PSYIN (Beta-galactosidase OS=Psychromonas ingrahamii (strain 37) GN=lacZ PE=3 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 2.784e-35
Identity = 55/112 (49.11%), Postives = 72/112 (64.29%), Query Frame = 1
Query:  118 FVKSLSGHWKFFLASSPPDVPLNFHKSSFQDSKWEAIPVPSNWQMHGFDRPIYTNVVYPFPLDPPNVPAENPTGCYRTYFHIPKEWQGRRILLHFEAVDSAFCAWINGVPCG 453
            F + L+G W+F L + P  VP +     F DS W  I VPSNWQ+ G+D+PIYTNV YPF  +PP VPA+NPTG YR  F +P  W+ R+  + F+ V+SAF  W NG+  G
Sbjct:   47 FQQLLNGQWRFQLFAKPEAVPNHCINIDFDDSAWSDITVPSNWQLQGYDKPIYTNVKYPFADNPPFVPADNPTGVYRLNFTLPTAWKERKNTVIFDGVNSAFHLWCNGIWVG 158          

HSP 2 Score: 50.0618 bits (118), Expect = 2.784e-35
Identity = 25/47 (53.19%), Postives = 32/47 (68.09%), Query Frame = 2
Query:  440 GFPVGYSQDSRLPAEFEIADYCYPHGSDKKNVLTIQIFRWIDGPYLK 580
            G  VGYSQDSRLPAEF+++  C+    D  N LT+ + RW DG YL+
Sbjct:  154 GIWVGYSQDSRLPAEFDLS--CHLQAGD--NQLTVMVLRWSDGSYLE 196          
BLAST of EY720792 vs. ExPASy Swiss-Prot
Match: BGAL_VIBVY (Beta-galactosidase OS=Vibrio vulnificus (strain YJ016) GN=lacZ PE=3 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 1.770e-34
Identity = 54/110 (49.09%), Postives = 72/110 (65.45%), Query Frame = 1
Query:  124 KSLSGHWKFFLASSPPDVPLNFHKSSFQDSKWEAIPVPSNWQMHGFDRPIYTNVVYPFPLDPPNVPAENPTGCYRTYFHIPKEWQGRRILLHFEAVDSAFCAWINGVPCG 453
            +SL+G WKF L  +P  V   F ++ F D++W+ IPVPSNWQ+HG+D+PIY N+ YPF ++PP VP ENPTGCYRT   +  E       + F+ V+SAF  W NG   G
Sbjct:   48 QSLNGQWKFKLFDAPEQVDGQFTQADFNDAEWDEIPVPSNWQLHGYDKPIYANIKYPFDVNPPFVPRENPTGCYRTRVSLSPEDLLNTQRIIFDGVNSAFHLWCNGTWVG 157          

HSP 2 Score: 46.595 bits (109), Expect = 1.770e-34
Identity = 22/44 (50.00%), Postives = 28/44 (63.64%), Query Frame = 2
Query:  449 VGYSQDSRLPAEFEIADYCYPHGSDKKNVLTIQIFRWIDGPYLK 580
            VGYSQDSRLPAEF++      H    +N L + + RW DG YL+
Sbjct:  156 VGYSQDSRLPAEFDLTS----HLVAGENTLAVMVMRWCDGSYLE 195          
BLAST of EY720792 vs. ExPASy Swiss-Prot
Match: BGAL_VIBVU (Beta-galactosidase OS=Vibrio vulnificus GN=lacZ PE=3 SV=2)

HSP 1 Score: 117.472 bits (293), Expect = 1.909e-33
Identity = 52/110 (47.27%), Postives = 72/110 (65.45%), Query Frame = 1
Query:  124 KSLSGHWKFFLASSPPDVPLNFHKSSFQDSKWEAIPVPSNWQMHGFDRPIYTNVVYPFPLDPPNVPAENPTGCYRTYFHIPKEWQGRRILLHFEAVDSAFCAWINGVPCG 453
            +SL+G WKF L  +P  V   F ++ F D++W+ IPVPSNWQ+ G+D+PIY N+ YPF ++PP VP++NPTGCYRT   +  E       + F+ V+SAF  W NG   G
Sbjct:   48 QSLNGQWKFKLFDAPEQVDGQFTQADFNDAEWDEIPVPSNWQLQGYDKPIYANIKYPFDVNPPFVPSDNPTGCYRTRVSLSPEDLLNTQRIIFDGVNSAFHLWCNGTWVG 157          

HSP 2 Score: 46.595 bits (109), Expect = 1.909e-33
Identity = 22/44 (50.00%), Postives = 28/44 (63.64%), Query Frame = 2
Query:  449 VGYSQDSRLPAEFEIADYCYPHGSDKKNVLTIQIFRWIDGPYLK 580
            VGYSQDSRLPAEF++      H    +N L + + RW DG YL+
Sbjct:  156 VGYSQDSRLPAEFDLTS----HLVAGENTLAVMVMRWCDGSYLE 195          
BLAST of EY720792 vs. ExPASy Swiss-Prot
Match: BGAL_VIBC3 (Beta-galactosidase OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Ogawa 395 / O395) GN=lacZ PE=3 SV=2)

HSP 1 Score: 114.39 bits (285), Expect = 2.486e-33
Identity = 54/106 (50.94%), Postives = 65/106 (61.32%), Query Frame = 1
Query:  124 KSLSGHWKFFLASSPPDVPLNFHKSSFQDSKWEAIPVPSNWQMHGFDRPIYTNVVYPFPLDPPNVPAENPTGCYRTYFHIPKEWQGRRILLHFEAVDSAFCAWING 441
            +SL+G W+F L   P  V        F DS W  IPVPSNWQM GFD+PIYTN+ YPF   PP VP +NPTGCYR  F + K+     I + F+ V+SAF  W NG
Sbjct:   48 QSLNGQWRFALFEKPEAVEPAVIDPDFDDSAWAHIPVPSNWQMQGFDKPIYTNIQYPFADRPPYVPQDNPTGCYRHRFTLEKQALTESIRIVFDGVNSAFHLWCNG 153          

HSP 2 Score: 49.2914 bits (116), Expect = 2.486e-33
Identity = 24/47 (51.06%), Postives = 31/47 (65.96%), Query Frame = 2
Query:  440 GFPVGYSQDSRLPAEFEIADYCYPHGSDKKNVLTIQIFRWIDGPYLK 580
            G  VGYSQDSRLPAEFE+     P+  + +N+L   + RW DG YL+
Sbjct:  153 GHWVGYSQDSRLPAEFELT----PYLQEGENLLVAMVLRWSDGSYLE 195          
BLAST of EY720792 vs. ExPASy Swiss-Prot
Match: BGAL_ALTMD (Beta-galactosidase OS=Alteromonas macleodii (strain DSM 17117 / Deep ecotype) GN=lacZ PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.487e-32
Identity = 58/126 (46.03%), Postives = 79/126 (62.70%), Query Frame = 1
Query:   73 HEALTSAAFWANGLPFVKSLSGHWKFFLASSPPDVP---LNFHKSSFQDSKWEAIPVPSNWQMHGFDRPIYTNVVYPFPLDPPNVPAENPTGCYRTYFHIPKEWQGRRILLHFEAVDSAFCAWING 441
            ++ L  A   AN   ++  L+G W F L  +P  VP   L    S+ + +KW++I VPSNWQ+ G+D+PIY NV YPFP++PP VP+ENPTGCYRT F +      +R  + FE V+SAF  W NG
Sbjct:   33 YKTLEDALHNANAQKYL--LNGEWDFCLFDAPEQVPESLLAATLSAEERAKWQSIVVPSNWQLKGYDKPIYCNVKYPFPVNPPIVPSENPTGCYRTTFSVTSAQLSQRNHIVFEGVNSAFHLWCNG 156          

HSP 2 Score: 44.669 bits (104), Expect = 3.487e-32
Identity = 22/44 (50.00%), Postives = 29/44 (65.91%), Query Frame = 2
Query:  449 VGYSQDSRLPAEFEIADYCYPHGSDKKNVLTIQIFRWIDGPYLK 580
            VGYSQDSRLPAEF+I++       + +N L   + RW DG YL+
Sbjct:  159 VGYSQDSRLPAEFDISNLLV----EGENRLAAMVIRWSDGSYLE 198          
BLAST of EY720792 vs. ExPASy Swiss-Prot
Match: BGAL_PHOPR (Beta-galactosidase OS=Photobacterium profundum GN=lacZ PE=3 SV=1)

HSP 1 Score: 110.923 bits (276), Expect = 4.542e-32
Identity = 52/106 (49.06%), Postives = 66/106 (62.26%), Query Frame = 1
Query:  124 KSLSGHWKFFLASSPPDVPLNFHKSSFQDSKWEAIPVPSNWQMHGFDRPIYTNVVYPFPLDPPNVPAENPTGCYRTYFHIPKEWQGRRILLHFEAVDSAFCAWING 441
            +SL+G WKF L  +P  V   F    F DS W  I VPSNWQ+ G+D+PIY NV YPF ++PP VPA+NPTGCYRT   + +        + F+ V+SAF  W NG
Sbjct:   47 QSLNGQWKFKLFDAPEQVEGEFIDVQFNDSAWGDITVPSNWQLQGYDKPIYANVKYPFEVNPPYVPADNPTGCYRTRLTLTEADLESTQRIIFDGVNSAFHLWCNG 152          

HSP 2 Score: 48.521 bits (114), Expect = 4.542e-32
Identity = 22/44 (50.00%), Postives = 30/44 (68.18%), Query Frame = 2
Query:  449 VGYSQDSRLPAEFEIADYCYPHGSDKKNVLTIQIFRWIDGPYLK 580
            VGYSQDSRLPAEF+++ Y     +  +N L + + RW DG YL+
Sbjct:  155 VGYSQDSRLPAEFDLSQYL----TAGENTLAVMVIRWSDGSYLE 194          
BLAST of EY720792 vs. ExPASy Swiss-Prot
Match: BGAL_PSEHA (Beta-galactosidase OS=Pseudoalteromonas haloplanktis GN=lacZ PE=1 SV=2)

HSP 1 Score: 113.62 bits (283), Expect = 8.289e-31
Identity = 58/109 (53.21%), Postives = 72/109 (66.06%), Query Frame = 1
Query:  124 KSLSGHWKFFLASSPP--DVPLNFHKSSFQDS-KWEAIPVPSNWQMHGFDRPIYTNVVYPFPLDPPNVPAENPTGCYRTYFHIPKEWQGRRILLHFEAVDSAFCAWING 441
            KSL+G W F L   P   D  L + K S + S  W++I VPSNWQ+HGFD+PIY NV YPF ++PP VP++NPTGCYRT F I  E   +R  + FE V+SAF  W NG
Sbjct:   48 KSLNGQWDFKLFDKPEAVDESLLYEKISKELSGDWQSITVPSNWQLHGFDKPIYCNVKYPFAVNPPFVPSDNPTGCYRTEFTITPEQLTQRNHIIFEGVNSAFHLWCNG 156          

HSP 2 Score: 41.5874 bits (96), Expect = 8.289e-31
Identity = 19/44 (43.18%), Postives = 28/44 (63.64%), Query Frame = 2
Query:  449 VGYSQDSRLPAEFEIADYCYPHGSDKKNVLTIQIFRWIDGPYLK 580
            VGYSQDSRLP+EF++++          N + + + RW DG YL+
Sbjct:  159 VGYSQDSRLPSEFDLSELLVV----GTNRIAVMVIRWSDGSYLE 198          
BLAST of EY720792 vs. ExPASy Swiss-Prot
Match: BGAL_SALAR (Beta-galactosidase OS=Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980) GN=lacZ PE=3 SV=2)

HSP 1 Score: 109.768 bits (273), Expect = 2.383e-30
Identity = 53/109 (48.62%), Postives = 73/109 (66.97%), Query Frame = 1
Query:  121 VKSLSGHWKFFLASSPPDVPLNFHKSSFQDSKWEAIPVPSNWQMHGFDRPIYTNVVYPFPLDPPNVPAENPTGCYRTYFHIPKEW--QGRRILLHFEAVDSAFCAWING 441
            ++SL+G WKF   SSP  VP N+      ++    I VPSNWQM+G+D PIY+N+ YPFP++PP VPAENPTGCY   F +  +W  +G+  ++ F+ V+SAF  W NG
Sbjct:   52 IRSLNGVWKFAWFSSPQAVPENWRLEDLTEAG--TINVPSNWQMYGYDSPIYSNITYPFPVNPPCVPAENPTGCYSLTFCMDDDWLTEGQTRII-FDGVNSAFHLWCNG 157          

HSP 2 Score: 43.8986 bits (102), Expect = 2.383e-30
Identity = 20/44 (45.45%), Postives = 29/44 (65.91%), Query Frame = 2
Query:  449 VGYSQDSRLPAEFEIADYCYPHGSDKKNVLTIQIFRWIDGPYLK 580
            VGY QDSRLP+EF++++Y        +N L + + RW DG YL+
Sbjct:  160 VGYGQDSRLPSEFDLSEYL----QVGENRLAVLVLRWSDGSYLE 199          
BLAST of EY720792 vs. ExPASy Swiss-Prot
Match: BGAL_ENT38 (Beta-galactosidase OS=Enterobacter sp. (strain 638) GN=lacZ PE=3 SV=1)

HSP 1 Score: 109.383 bits (272), Expect = 4.040e-30
Identity = 51/107 (47.66%), Postives = 69/107 (64.49%), Query Frame = 1
Query:  124 KSLSGHWKFFLASSPPDVPLNFHKSSFQDSKWEAIPVPSNWQMHGFDRPIYTNVVYPFPLDPPNVPAENPTGCYRTYFHIPKEW-QGRRILLHFEAVDSAFCAWING 441
            +SL+G W+F   ++P  VP ++      D+     PVPSNWQM GFD PIYTNV YP P++PP VPAENPTGCY   F + ++W +  +  + F+ V+SAF  W NG
Sbjct:   54 RSLNGDWQFSYYAAPEQVPDSWVTEDCADAV--TTPVPSNWQMQGFDTPIYTNVTYPIPVNPPFVPAENPTGCYSLTFEVDEQWLESGQTRIVFDGVNSAFYLWCNG 158          

HSP 2 Score: 43.5134 bits (101), Expect = 4.040e-30
Identity = 21/44 (47.73%), Postives = 28/44 (63.64%), Query Frame = 2
Query:  449 VGYSQDSRLPAEFEIADYCYPHGSDKKNVLTIQIFRWIDGPYLK 580
            +GYSQDSRLPAEF+++    P      N L + + RW DG YL+
Sbjct:  161 MGYSQDSRLPAEFDLSAVLRP----GTNRLAVLVLRWCDGSYLE 200          
The following BLAST results are available for this feature:
BLAST of EY720792 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 68
Match NameE-valueIdentityDescription
BGAL_THEMA4.373e-3651.82Beta-galactosidase OS=Thermotoga maritima GN=lacZ ... [more]
BGAL_PSYIN2.784e-3549.11Beta-galactosidase OS=Psychromonas ingrahamii (str... [more]
BGAL_VIBVY1.770e-3449.09Beta-galactosidase OS=Vibrio vulnificus (strain YJ... [more]
BGAL_VIBVU1.909e-3347.27Beta-galactosidase OS=Vibrio vulnificus GN=lacZ PE... [more]
BGAL_VIBC32.486e-3350.94Beta-galactosidase OS=Vibrio cholerae serotype O1 ... [more]
BGAL_ALTMD3.487e-3246.03Beta-galactosidase OS=Alteromonas macleodii (strai... [more]
BGAL_PHOPR4.542e-3249.06Beta-galactosidase OS=Photobacterium profundum GN=... [more]
BGAL_PSEHA8.289e-3153.21Beta-galactosidase OS=Pseudoalteromonas haloplankt... [more]
BGAL_SALAR2.383e-3048.62Beta-galactosidase OS=Salmonella arizonae (strain ... [more]
BGAL_ENT384.040e-3047.66Beta-galactosidase OS=Enterobacter sp. (strain 638... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-014-D01-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720792 ID=EY720792; Name=EY720792; organism=Citrus sinensis; type=EST; length=888bp
CAACCACGCGTCCGAACGCAATAAGTGGATATTTCAGTGTCCAATTCTGC
TGTTTGGGATGATGATGCTGTTCATGAAGCTCTCACTAGTGCTGCCTTTT
GGGCAAATGGCTTGCCTTTTGTCAAGTCTTTGTCTGGTCACTGGAAATTT
TTCTTGGCTTCAAGTCCTCCCGATGTTCCTCTGAATTTTCATAAAAGTTC
ATTTCAGGATTCCAAGTGGGAAGCTATACCCGTTCCTTCAAATTGGCAGA
TGCATGGCTTCGATCGCCCAATTTATACAAATGTTGTATATCCATTTCCA
CTTGATCCCCCTAATGTCCCTGCAGAAAATCCTACAGGCTGTTACAGGAC
ATACTTTCACATTCCTAAAGAGTGGCAAGGTCGCAGAATTTTGCTGCACT
TTGAAGCTGTTGACTCTGCTTTCTGTGCATGGATTAATGGGGTTCCCTGT
GGGATATAGTCAAGATAGTAGGCTACCAGCGGAGTTTGAAATTGCAGATT
ACTGTTATCCTCATGGTTCCGACAAGAAGAATGTGCTAACAATTCAAATC
TTTAGATGGATTGATGGTCCTTACTTGAAAATCAAGATATTGGGGGGCAT
CTGGTATTCACCGGGAGGTGGGCCTGCAGCCGAAGCCGGGTATTTGGGGG
GACTCGGCGTGAAGTCGGTCTGGGGAAGGGATTTTCCTCGCCGTTTTCCG
GGTGCAAGTGGAATACATGGGCCCCAAAATTGCTTGGGAGGTTTCCTGGC
CGTTTTTTCTTTAGGTTGTTTTTATACACTTGCACCCGGTCTACTGCGAC
TCAGCCATGACTACGGTAGCCGGGGGGGTAGAATAAAGAGGCCCCCGAAG
CGATTTCCAGGTCCGGGGTAGTTACTGTTGAAAAAGCT
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