EY720781

Overview
NameEY720781
Unique NameEY720781
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length852
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720781 vs. ExPASy Swiss-Prot
Match: WRK19_ARATH (Probable WRKY transcription factor 19 OS=Arabidopsis thaliana GN=WRKY19 PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 8.049e-28
Identity = 80/197 (40.61%), Postives = 109/197 (55.33%), Query Frame = 1
Query:   13 TDAIEGIFLNLSKIRDIHLSARVFANMSKLRLLKLYMPEHDDAPIMSSKVHLNQGLEYLPEELRYLHWHEYPLKTLPSNFEPENLIELNLPYSKVEQIWEGEKEAL--------KLKSADLHHSDNLTRMLEPSEIPNLERINLSNGKSLSYFPLFCQNVNNMLSRVVRLDLSYCAIMEIPQDIGCLSSLKELNLRG 579
            T AIEGIFL++  ++    +  VF  M  LRLLKLY  + ++       V   QGLEYLP +LR LHW  YPL +LP +F PENL+ELNLP S  +++W+G+K           KLK   L +SD LT++   S   NLE I+L    SL    L      + L ++V L+L  C+ +E    +  L SL+ LNL G
Sbjct: 1150 TSAIEGIFLDMLNLK-FDANPNVFEKMCNLRLLKLYCSKAEE----KHGVSFPQGLEYLPSKLRLLHWEYYPLSSLPKSFNPENLVELNLPSSCAKKLWKGKKARFCTTNSSLEKLKKMRLSYSDQLTKIPRLSSATNLEHIDLEGCNSL----LSLSQSISYLKKLVFLNLKGCSKLENIPSMVDLESLEVLNLSG 1337          
BLAST of EY720781 vs. ExPASy Swiss-Prot
Match: WRK52_ARATH (Probable WRKY transcription factor 52 OS=Arabidopsis thaliana GN=WRKY52 PE=2 SV=3)

HSP 1 Score: 114.775 bits (286), Expect = 6.377e-25
Identity = 72/202 (35.64%), Postives = 113/202 (55.94%), Query Frame = 1
Query:   13 TDAIEGIFLNLSKIRDIHLSARVFANMSKLRLLKLYMPEHDDAPIMSSKVHLNQGLEYLPEELRYLHWHEYPLKTLPSNFEPENLIELNLPYSKVEQIWEGEKEALKLKSADLHHSDNLTRMLEPSEIPNLERINLSNGKSLSYFPLFCQNVNNMLSRVVRLDLSYC----AIMEIPQDIGCLSSLKELNLRGNNRRSVPGS 606
            ++ IEG+FL+ S +R   L    F NM  LRLLK+Y    +  P+++        L  LP ELR LHW  YPLK+LP NF+P +L+E+N+PYS+++++W G K    L++  L HS +L  + +  +  NLE I+L     L  FP         L R+  ++LS C    +++EIP +I      ++L+L+G    ++P S
Sbjct:  498 SEEIEGLFLDTSNLR-FDLQPSAFKNMLNLRLLKIYCSNPEVHPVINFPTG---SLHSLPNELRLLHWENYPLKSLPQNFDPRHLVEINMPYSQLQKLWGGTKNLEMLRTIRLCHSHHLVDIDDLLKAENLEVIDLQGCTRLQNFP-----AAGRLLRLRVVNLSGCIKIKSVLEIPPNI------EKLHLQGTGILALPVS 684          
BLAST of EY720781 vs. ExPASy Swiss-Prot
Match: Y4117_ARATH (Putative disease resistance protein At4g11170 OS=Arabidopsis thaliana GN=At4g11170 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 9.530e-21
Identity = 69/191 (36.13%), Postives = 109/191 (57.07%), Query Frame = 1
Query:   13 TDAIEGIFLNLSKIRD-IHLSARVFANMSKLRLLKLYMPEHDDAPIMSSKVHL-NQGLEYLPEELRYLHWHEYPLKTLPSNFEPENLIELNLPYSKVEQIWEGEKEALKLKSADLHHSDNLTRMLEPSEIPNLERINLSNGKSLSYFPLFCQNVNNMLSRVVRLDLSYCAIME-IPQDIGCLSSLKELNLR 576
            T  + GI L++ +I++ +++S + F  M  L  LK YM    D   M  K+ L  +GL YLP+ LR LHW  YPL+  PS+F PE L+ELN+ +SK++++W G +    L++ +L+ S NL  +    E   L R++L   +SL   P   +N    L  ++ L++S C  +E IP +I  L SL+ L+ R
Sbjct:  526 TGTVLGISLDMCEIKEELYISEKTFEEMRNLVYLKFYMSSPIDDK-MKVKLQLPEEGLSYLPQ-LRLLHWDAYPLEFFPSSFRPECLVELNMSHSKLKKLWSGVQPLRNLRTMNLNSSRNLEILPNLMEATKLNRLDLGWCESLVELPSSIKN----LQHLILLEMSCCKKLEIIPTNIN-LPSLEVLHFR 709          
BLAST of EY720781 vs. ExPASy Swiss-Prot
Match: WRK16_ARATH (Probable WRKY transcription factor 16 OS=Arabidopsis thaliana GN=WRKY16 PE=2 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 1.054e-19
Identity = 67/202 (33.17%), Postives = 103/202 (50.99%), Query Frame = 1
Query:   16 DAIEGIFLNLSKIRDIHLSARVFANMSKLRLLKLYMPEHDDAPIMSSKVHLNQGLEYLPEELRYLHWHEYPLKTLPSNFEPENLIELNLPYSKVEQIWEGEKEALKLKSADLHHSDNLTRMLEPSEIPNLERINLSNGKSLSYFPLFCQNVNNMLSRVVRLDLSYC----AIMEIPQDIGCLSSLKELNLRGNNRRSVPGSM 609
            + IEG+FL+ S +    +    F NM  LRL K+Y    +   + +    L   L  LP  LR LHW  YPL+ LP NF+P +L+E+N+PYS+++++W G K+   LK+  L HS  L  + +  +  NLE ++L     L  FP         L  +  ++LS C    +  EIP +I      + LNL+G     +P S+
Sbjct:  492 EEIEGMFLDTSNL-SFDIKHVAFDNMLNLRLFKIYSSNPEVHHVNN---FLKGSLSSLPNVLRLLHWENYPLQFLPQNFDPIHLVEINMPYSQLKKLWGGTKDLEMLKTIRLCHSQQLVDIDDLLKAQNLEVVDLQGCTRLQSFP-----ATGQLLHLRVVNLSGCTEIKSFPEIPPNI------ETLNLQGTGIIELPLSI 678          
The following BLAST results are available for this feature:
BLAST of EY720781 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
WRK19_ARATH8.049e-2840.61Probable WRKY transcription factor 19 OS=Arabidops... [more]
WRK52_ARATH6.377e-2535.64Probable WRKY transcription factor 52 OS=Arabidops... [more]
Y4117_ARATH9.530e-2136.13Putative disease resistance protein At4g11170 OS=A... [more]
WRK16_ARATH1.054e-1933.17Probable WRKY transcription factor 16 OS=Arabidops... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-703-014-B11-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720781 ID=EY720781; Name=EY720781; organism=Citrus sinensis; type=EST; length=852bp
CCACGCGTCCGGACTGATGCAATTGAAGGTATATTCCTCAATTTGTCCAA
AATAAGAGACATACATCTAAGTGCTCGAGTCTTTGCAAATATGTCGAAAC
TTAGATTGCTGAAATTATATATGCCTGAGCATGACGATGCTCCAATTATG
AGTTCTAAAGTACATCTTAATCAAGGTCTGGAATATCTTCCCGAGGAATT
GAGATATCTCCACTGGCATGAATATCCTTTGAAAACATTGCCATCTAATT
TTGAACCAGAGAACCTTATTGAGCTCAACTTGCCTTATAGTAAAGTCGAG
CAAATTTGGGAAGGAGAAAAGGAAGCTCTCAAGTTAAAATCTGCTGACCT
CCACCACTCCGACAATCTCACCAGGATGCTAGAACCGTCAGAAATCCCAA
ATCTTGAGAGAATTAATCTTTCAAATGGCAAAAGCTTGTCTTACTTTCCC
TTGTTTTGTCAGAATGTCAACAATATGTTATCACGTGTGGTACGGCTAGA
TTTAAGTTACTGTGCCATAATGGAGATTCCGCAAGATATTGGTTGTCTAT
CCTCATTAAAAGAGTTAAATCTACGTGGAAATAACCGTCGGAGTGTACCT
GGCAGTATGGGCTCTCTATCCTCTTGGACAAGAATGAATCTAGTTGAAAA
TAAGTGGGAGAGGTTTACTCGCCAGTTGCGGCCGGCTATCCTCATTGGAA
ATCTTACATCTGACTCGAAATAACCTGCTGAGTTGACCTATGAGTATCCA
GCCGACTTCACGGCGGAGAACTCCTGGATGTGGGAAATGGCATAAGGCTC
AGGCAGGCCAGAGCCCCCAAGTCTCGTAAGTCTATTGAAGACAGGAATGG
CA
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