EY720766

Overview
NameEY720766
Unique NameEY720766
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length905
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720766 vs. ExPASy Swiss-Prot
Match: Y4158_ARATH (B3 domain-containing protein At4g01580 OS=Arabidopsis thaliana GN=At4g01580 PE=2 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 9.318e-25
Identity = 44/116 (37.93%), Postives = 70/116 (60.34%), Query Frame = 2
Query:  500 VKKFGRKIWFHQGWXNFVESQSISAGYFLLFKYEKNSIFRVLIFDMTACEIDYPF--------EDDMACEMCVEISEEQFKHEAELLSRKRKME-DGLERDEPMLNLICLYHLEKR 820
            +K+ G +IWFH+GW  F E+ SI  G+FLLF+Y+KNS FRV+IF+ +ACE +YP         +DD+     +EI+ ++F  E +   R R +E D +  D  ++ ++     +KR
Sbjct:   76 LKRIGEEIWFHEGWSEFAEAHSIEEGHFLLFEYKKNSSFRVIIFNASACETNYPLDAVHIIDSDDDV-----IEITGKEFDTEHKSKKRPRDIEFDKILHDVDVMQVLKEEEEDKR 186          

HSP 2 Score: 52.373 bits (124), Expect = 9.318e-25
Identity = 24/52 (46.15%), Postives = 34/52 (65.38%), Query Frame = 3
Query:  363 FYSMILPSTIHNKMLRIPPKFVGQFGDELSSVAKLAVPDGRVWQVGLKNLGE 518
            F+ ++LPST+ +KM+RIPP+FV   G +LS V  L  P G    + LK +GE
Sbjct:   30 FFKLVLPSTMKDKMMRIPPRFVKLQGSKLSEVVTLVTPAGYKRSIKLKRIGE 81          
BLAST of EY720766 vs. ExPASy Swiss-Prot
Match: Y3896_ARATH (B3 domain-containing protein At3g18960 OS=Arabidopsis thaliana GN=At3g18960 PE=2 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 1.384e-22
Identity = 30/56 (53.57%), Postives = 44/56 (78.57%), Query Frame = 2
Query:  500 VKKFGRKIWFHQGWXNFVESQSISAGYFLLFKYEKNSIFRVLIFDMTACEIDYPFE 667
            +K+ G +IWFH+GW  F E+ SI  G+FLLF+Y++NS FRV+IF+++ACE  YP +
Sbjct:   76 LKRIGEEIWFHEGWSEFAEAHSIEEGHFLLFEYKENSSFRVIIFNVSACETKYPLD 131          

HSP 2 Score: 50.447 bits (119), Expect = 1.384e-22
Identity = 23/52 (44.23%), Postives = 34/52 (65.38%), Query Frame = 3
Query:  363 FYSMILPSTIHNKMLRIPPKFVGQFGDELSSVAKLAVPDGRVWQVGLKNLGE 518
            F+ ++LPST+ +KM++IPP+FV   G +LS V  L  P G    + LK +GE
Sbjct:   30 FFKLVLPSTMKDKMMKIPPRFVKLQGSKLSEVVTLETPAGFKRSIKLKRIGE 81          
BLAST of EY720766 vs. ExPASy Swiss-Prot
Match: VRN1_ARATH (B3 domain-containing transcription factor VRN1 OS=Arabidopsis thaliana GN=VRN1 PE=2 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 5.441e-21
Identity = 27/54 (50.00%), Postives = 36/54 (66.67%), Query Frame = 2
Query:  497 GVKKFGRKIWFHQGWXNFVESQSISAGYFLLFKYEKNSIFRVLIFDMTACEIDY 658
            G++K   KIWF  GW  FV+  SI  GY L+F+YE NS F V IF+++  EI+Y
Sbjct:   51 GLRKADNKIWFQDGWQEFVDRYSIRIGYLLIFRYEGNSAFSVYIFNLSHSEINY 104          

HSP 2 Score: 59.6918 bits (143), Expect = 5.441e-21
Identity = 27/48 (56.25%), Postives = 33/48 (68.75%), Query Frame = 3
Query:  363 FYSMILPSTIHNKMLRIPPKFVGQFGDELSSVAKLAVPDGRVWQVGLK 506
            F+ +I  STI  K LR+P KFV +F DELS    L VPDG VW+VGL+
Sbjct:    6 FHKLIFSSTIQEKRLRVPDKFVSKFKDELSVAVALTVPDGHVWRVGLR 53          
BLAST of EY720766 vs. ExPASy Swiss-Prot
Match: Y1475_ARATH (B3 domain-containing protein At1g49475 OS=Arabidopsis thaliana GN=At1g49475 PE=2 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 1.200e-16
Identity = 29/57 (50.88%), Postives = 43/57 (75.44%), Query Frame = 2
Query:  500 VKKFGRKIWFHQGWXNFVESQSISAGYFLLFKYEKNSIFRVLIFDMTACEIDYPFED 670
            +K+ G ++WF +GW  F E+ S+S G+FL F YE +S FRV+IFD++A EI+YP +D
Sbjct:   79 IKRIGDEVWFEKGWSEFAEAHSLSDGHFLFFHYEGDSCFRVVIFDVSASEIEYPLDD 135          

HSP 2 Score: 34.2686 bits (77), Expect = 1.200e-16
Identity = 19/56 (33.93%), Postives = 31/56 (55.36%), Query Frame = 3
Query:  351 TSSMFYSMILPSTIHNKMLRIPPKFVGQFGDELSSVAKLAVPDGRVWQVGLKNLGE 518
            T   F  +IL S I  KM+++P +FV +FG +L+    L  P G    + +K +G+
Sbjct:   30 TVKKFIKIILLSRIIEKMMKVPARFV-RFGPKLTDNVTLQTPVGFKRSIRIKRIGD 84          
The following BLAST results are available for this feature:
BLAST of EY720766 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
Y4158_ARATH9.318e-2537.93B3 domain-containing protein At4g01580 OS=Arabidop... [more]
Y3896_ARATH1.384e-2253.57B3 domain-containing protein At3g18960 OS=Arabidop... [more]
VRN1_ARATH5.441e-2150.00B3 domain-containing transcription factor VRN1 OS=... [more]
Y1475_ARATH1.200e-1650.88B3 domain-containing protein At1g49475 OS=Arabidop... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-703-014-A07-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720766 ID=EY720766; Name=EY720766; organism=Citrus sinensis; type=EST; length=905bp
CCACGCGTCCGTGGTCCATCTCTTTCCTCCATTCAAATCGAAGCATGAAC
CACAACATCCCTTTCATCTTCTCCAATGCTTTGATTAAAAAACTTGCCCA
CGAACGGGAGACCATGACACTGAATCCGGACACGCCAATACCAGAGATGA
CTGATTCACGACGGTGATGTGGAAGAATACCGACCAGTGACTTTCGCCGT
CGACCCACAAACAATCCCAGTGTTTTTGAGCTGCGATGAGGAGCTAAAAC
AAACAGGTGCTGTTGACCATACTATTCAAGTGTTCAATTGGATAAAAAAT
CAGAACAACTATTGGGCACAGGGGGTATCATGTCTAGTTCAGCTGCGGAG
ACTTCCTCAATGTTCTACAGTATGATCCTTCCTTCCACCATCCATAACAA
GATGCTAAGGATTCCACCAAAGTTTGTGGGACAATTTGGAGATGAACTCT
CTAGTGTTGCTAAACTCGCAGTTCCTGATGGTCGGGTTTGGCAAGTGGGG
TTAAAAAATTTGGGAGAAAGATTTGGTTCCATCAGGGTTGGCNAAACTTT
GTAGAAAGTCAGTCAATTTCTGCTGGTTACTTTTTGCTTTTTAAGTATGA
AAAGAATTCGATCTTTCGTGTTCTTATATTTGACATGACTGCTTGCGAGA
TTGATTATCCATTTGAGGATGACATGGCATGTGAGATGTGTGTTGAGATA
AGTGAAGAGCAGTTTAAGCATGAGGCTGAGCTGCTAAGCAGGAAGAGGAA
AATGGAAGATGGGCTGGAGAGAGATGAACCAATGCTGAACCTGATTTGCT
TGTATCACCTAGAAAAGCGGAATATACATTACTGAAAATATAAAGAACTA
TTTTCCACGGAAGACTAGAGAGAGCGTTTACATGGCAAGAGCTTTCAGGC
ACCAA
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