EY720764

Overview
NameEY720764
Unique NameEY720764
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length478
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720764 vs. ExPASy Swiss-Prot
Match: RL321_ARATH (60S ribosomal protein L32-1 OS=Arabidopsis thaliana GN=RPL32A PE=2 SV=2)

HSP 1 Score: 131.339 bits (329), Expect = 2.116e-30
Identity = 63/69 (91.30%), Postives = 67/69 (97.10%), Query Frame = 2
Query:   14 RHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDVVVTNKLARLRSQEEE 220
            RHYLPNGFKKFVVHN +ELELLMMHNRTYCAEIAHNVSTKKRK IVERA+QLDVVVTN+LARLRSQE+E
Sbjct:   65 RHYLPNGFKKFVVHNTSELELLMMHNRTYCAEIAHNVSTKKRKAIVERASQLDVVVTNRLARLRSQEDE 133          
BLAST of EY720764 vs. ExPASy Swiss-Prot
Match: RL322_ARATH (60S ribosomal protein L32-2 OS=Arabidopsis thaliana GN=RPL32B PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 1.371e-29
Identity = 60/69 (86.96%), Postives = 66/69 (95.65%), Query Frame = 2
Query:   14 RHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDVVVTNKLARLRSQEEE 220
            RHYLPNGFKKF+VHN +ELELLMMHNRTYCAEIAHN+STKKRK IVERA+QLDVVV+NKL RLRSQE+E
Sbjct:   65 RHYLPNGFKKFIVHNTSELELLMMHNRTYCAEIAHNISTKKRKAIVERASQLDVVVSNKLGRLRSQEDE 133          
BLAST of EY720764 vs. ExPASy Swiss-Prot
Match: RL32_SPOFR (60S ribosomal protein L32 OS=Spodoptera frugiperda GN=RpL32 PE=2 SV=1)

HSP 1 Score: 104.76 bits (260), Expect = 2.121e-22
Identity = 51/69 (73.91%), Postives = 56/69 (81.16%), Query Frame = 2
Query:   14 RHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDVVVTNKLARLRSQEEE 220
            RH LPNGF+K +VHNV ELE+LMM NR YCAEIAH VS+KKRK IVERA QL + VTN  ARLRSQE E
Sbjct:   66 RHMLPNGFRKVLVHNVRELEILMMQNRKYCAEIAHGVSSKKRKTIVERAQQLSIRVTNSAARLRSQENE 134          
BLAST of EY720764 vs. ExPASy Swiss-Prot
Match: RL32_ICTPU (60S ribosomal protein L32 OS=Ictalurus punctatus GN=rpl32 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.052e-21
Identity = 49/69 (71.01%), Postives = 59/69 (85.51%), Query Frame = 2
Query:   14 RHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDVVVTNKLARLRSQEEE 220
            +H LP+GFKKF+VHNV ELE+L+M N++YCAEIAHNVS+K RK IVERAAQL + VTN  ARLRS+E E
Sbjct:   67 KHMLPSGFKKFLVHNVKELEVLLMSNKSYCAEIAHNVSSKNRKVIVERAAQLAIKVTNPNARLRSEENE 135          
BLAST of EY720764 vs. ExPASy Swiss-Prot
Match: RL32_DROYA (60S ribosomal protein L32 OS=Drosophila yakuba GN=RpL32 PE=2 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.052e-21
Identity = 50/69 (72.46%), Postives = 55/69 (79.71%), Query Frame = 2
Query:   14 RHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDVVVTNKLARLRSQEEE 220
            RH LP GFKKF+VHNV ELE+L+M NR YC EIAH VS+KKRKEIVERA QL V +TN   RLRSQE E
Sbjct:   66 RHMLPTGFKKFLVHNVRELEVLLMQNRVYCGEIAHGVSSKKRKEIVERAKQLSVRLTNPNGRLRSQENE 134          
BLAST of EY720764 vs. ExPASy Swiss-Prot
Match: RL32_DROSI (60S ribosomal protein L32 OS=Drosophila simulans GN=RpL32 PE=3 SV=1)

HSP 1 Score: 102.449 bits (254), Expect = 1.052e-21
Identity = 50/69 (72.46%), Postives = 55/69 (79.71%), Query Frame = 2
Query:   14 RHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDVVVTNKLARLRSQEEE 220
            RH LP GFKKF+VHNV ELE+L+M NR YC EIAH VS+KKRKEIVERA QL V +TN   RLRSQE E
Sbjct:   66 RHMLPTGFKKFLVHNVRELEVLLMQNRVYCGEIAHGVSSKKRKEIVERAKQLSVRLTNPNGRLRSQENE 134          
BLAST of EY720764 vs. ExPASy Swiss-Prot
Match: RL32_DROME (60S ribosomal protein L32 OS=Drosophila melanogaster GN=RpL32 PE=1 SV=3)

HSP 1 Score: 102.449 bits (254), Expect = 1.052e-21
Identity = 50/69 (72.46%), Postives = 55/69 (79.71%), Query Frame = 2
Query:   14 RHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDVVVTNKLARLRSQEEE 220
            RH LP GFKKF+VHNV ELE+L+M NR YC EIAH VS+KKRKEIVERA QL V +TN   RLRSQE E
Sbjct:   66 RHMLPTGFKKFLVHNVRELEVLLMQNRVYCGEIAHGVSSKKRKEIVERAKQLSVRLTNPNGRLRSQENE 134          
BLAST of EY720764 vs. ExPASy Swiss-Prot
Match: RL32_DROAC (60S ribosomal protein L32 OS=Drosophila acanthoptera GN=RpL32 PE=2 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 1.795e-21
Identity = 50/69 (72.46%), Postives = 55/69 (79.71%), Query Frame = 2
Query:   14 RHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDVVVTNKLARLRSQEEE 220
            RH LP GFKKF+VHNV ELE+L+M NR YC EIAH VS+ KRKEIVERA QL V +TN  ARLRSQE E
Sbjct:   66 RHMLPTGFKKFLVHNVRELEVLLMQNREYCGEIAHGVSSNKRKEIVERAKQLSVRLTNPNARLRSQENE 134          
BLAST of EY720764 vs. ExPASy Swiss-Prot
Match: RL32_DROPS (60S ribosomal protein L32 OS=Drosophila pseudoobscura pseudoobscura GN=RpL32 PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 2.345e-21
Identity = 49/69 (71.01%), Postives = 55/69 (79.71%), Query Frame = 2
Query:   14 RHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDVVVTNKLARLRSQEEE 220
            RH LP GFKKF+VHNV ELE+L+M NR YC EIAH VS+KKRKEIVERA QL + +TN   RLRSQE E
Sbjct:   66 RHMLPTGFKKFLVHNVRELEVLLMQNRVYCGEIAHAVSSKKRKEIVERAKQLSIRLTNPNGRLRSQENE 134          
BLAST of EY720764 vs. ExPASy Swiss-Prot
Match: RL32_DROPE (60S ribosomal protein L32 OS=Drosophila persimilis GN=RpL32 PE=3 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 2.345e-21
Identity = 49/69 (71.01%), Postives = 55/69 (79.71%), Query Frame = 2
Query:   14 RHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDVVVTNKLARLRSQEEE 220
            RH LP GFKKF+VHNV ELE+L+M NR YC EIAH VS+KKRKEIVERA QL + +TN   RLRSQE E
Sbjct:   66 RHMLPTGFKKFLVHNVRELEVLLMQNRVYCGEIAHAVSSKKRKEIVERAKQLSIRLTNPNGRLRSQENE 134          
The following BLAST results are available for this feature:
BLAST of EY720764 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 30
Match NameE-valueIdentityDescription
RL321_ARATH2.116e-3091.3060S ribosomal protein L32-1 OS=Arabidopsis thalian... [more]
RL322_ARATH1.371e-2986.9660S ribosomal protein L32-2 OS=Arabidopsis thalian... [more]
RL32_SPOFR2.121e-2273.9160S ribosomal protein L32 OS=Spodoptera frugiperda... [more]
RL32_ICTPU1.052e-2171.0160S ribosomal protein L32 OS=Ictalurus punctatus G... [more]
RL32_DROYA1.052e-2172.4660S ribosomal protein L32 OS=Drosophila yakuba GN=... [more]
RL32_DROSI1.052e-2172.4660S ribosomal protein L32 OS=Drosophila simulans G... [more]
RL32_DROME1.052e-2172.4660S ribosomal protein L32 OS=Drosophila melanogast... [more]
RL32_DROAC1.795e-2172.4660S ribosomal protein L32 OS=Drosophila acanthopte... [more]
RL32_DROPS2.345e-2171.0160S ribosomal protein L32 OS=Drosophila pseudoobsc... [more]
RL32_DROPE2.345e-2171.0160S ribosomal protein L32 OS=Drosophila persimilis... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-014-A03-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720764 ID=EY720764; Name=EY720764; organism=Citrus sinensis; type=EST; length=478bp
CCACGCGTCCGCACGCCACTATCTGCCCAATGGATTCAAGAAGTTTGTTG
TGCACAATGTCAATGAACTGGAACTCTTGATGATGCACAACAGGACTTAT
TGTGCTGAGATAGCCCACAACGTATCAACCAAGAAGAGAAAGGAGATTGT
CGAGCGTGCTGCACAATTGGATGTTGTGGTCACCAACAAATTGGCCAGGT
TGCGCAGCCAGGAGGAGGAGTAAAAATTGGTTTCTATATTTTATGTTAGT
GTTTGCTTTTGGCCAAATGTTTCCTAGGTTGTCTTTGGAATGGATGAACA
TTTCCAGGGTTGAATTATGATGTATTTTCTATTTTTGTCACCTGAATGAT
ATTTTGAATTTGTTGTTTTTTGCGGAGCATGATTAATGTTATGTCAACTT
AGGAGTTAAGGTTTAAAAAANANNNAAAAAAAAAAAAAAAAAAAANAAAA
AAAAAAAAAAAAAAAAAAAAAAAANNAG
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