EY720761
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY720761 vs. ExPASy Swiss-Prot
Match: CPSF3_HUMAN (Cleavage and polyadenylation specificity factor subunit 3 OS=Homo sapiens GN=CPSF3 PE=1 SV=1) HSP 1 Score: 263.848 bits (673), Expect = 8.753e-70 Identity = 123/207 (59.42%), Postives = 157/207 (75.85%), Query Frame = 3 Query: 15 TRPDINRSMDRIEVLDFHQTVEVNGIKFWCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAELPQFSPDICIIESTYGVQLHQPRNIRERRFTDVIHSTISQGGRVLIPAYALGRAQELLLILDEYWSNHPEFHNMPMYYASPLAKKCMAVYQTLLPSMNERIRPQFADSDAFKYKALAPSNSIDDLPDGRPADGDGSPG 635 T D+ SMD+IE ++FH+ EV GIKFWCY AGHVLGAAMFM++IAGV++LYTGD+SR+EDRHL AAE+P PDI IIESTYG +H+ R RE RF + +H +++GGR LIP +ALGRAQELLLILDEYW NHPE H++P+YYAS LAKKCMAVYQT + +MN++IR Q ++ F +K ++ S+D D P+ SPG Sbjct: 124 TETDLEESMDKIETINFHEVKEVAGIKFWCYHAGHVLGAAMFMIEIAGVKLLYTGDFSRQEDRHLMAAEIPNIKPDILIIESTYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPFVFKHISNLKSMDHFDDIGPSVVMASPG 330
BLAST of EY720761 vs. ExPASy Swiss-Prot
Match: CPSF3_BOVIN (Cleavage and polyadenylation specificity factor subunit 3 OS=Bos taurus GN=CPSF3 PE=2 SV=1) HSP 1 Score: 263.848 bits (673), Expect = 8.753e-70 Identity = 123/207 (59.42%), Postives = 157/207 (75.85%), Query Frame = 3 Query: 15 TRPDINRSMDRIEVLDFHQTVEVNGIKFWCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAELPQFSPDICIIESTYGVQLHQPRNIRERRFTDVIHSTISQGGRVLIPAYALGRAQELLLILDEYWSNHPEFHNMPMYYASPLAKKCMAVYQTLLPSMNERIRPQFADSDAFKYKALAPSNSIDDLPDGRPADGDGSPG 635 T D+ SMD+IE ++FH+ EV GIKFWCY AGHVLGAAMFM++IAGV++LYTGD+SR+EDRHL AAE+P PDI IIESTYG +H+ R RE RF + +H +++GGR LIP +ALGRAQELLLILDEYW NHPE H++P+YYAS LAKKCMAVYQT + +MN++IR Q ++ F +K ++ S+D D P+ SPG Sbjct: 124 TETDLEESMDKIETINFHEVKEVAGIKFWCYHAGHVLGAAMFMIEIAGVKLLYTGDFSRQEDRHLMAAEIPNIKPDILIIESTYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPFVFKHISNLKSMDHFDDIGPSVVMASPG 330
BLAST of EY720761 vs. ExPASy Swiss-Prot
Match: CPSF3_MOUSE (Cleavage and polyadenylation specificity factor subunit 3 OS=Mus musculus GN=Cpsf3 PE=1 SV=1) HSP 1 Score: 262.692 bits (670), Expect = 1.950e-69 Identity = 123/207 (59.42%), Postives = 156/207 (75.36%), Query Frame = 3 Query: 15 TRPDINRSMDRIEVLDFHQTVEVNGIKFWCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAELPQFSPDICIIESTYGVQLHQPRNIRERRFTDVIHSTISQGGRVLIPAYALGRAQELLLILDEYWSNHPEFHNMPMYYASPLAKKCMAVYQTLLPSMNERIRPQFADSDAFKYKALAPSNSIDDLPDGRPADGDGSPG 635 T D+ SMD+IE ++FH+ EV GIKFWCY AGHVLGAAMFM++IAGV++LYTGD+SR+EDRHL AAE+P PDI IIESTYG +H+ R RE RF +H +++GGR LIP +ALGRAQELLLILDEYW NHPE H++P+YYAS LAKKCMAVYQT + +MN++IR Q ++ F +K ++ S+D D P+ SPG Sbjct: 124 TETDLEESMDKIETINFHEVKEVAGIKFWCYHAGHVLGAAMFMIEIAGVKLLYTGDFSRQEDRHLMAAEIPNIKPDILIIESTYGTHIHEKREEREARFWHTVHDIVNRGGRGLIPVFALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININNPFVFKHISNLKSMDHFDDIGPSVVMASPG 330
BLAST of EY720761 vs. ExPASy Swiss-Prot
Match: CPSF3_DICDI (Cleavage and polyadenylation specificity factor subunit 3 OS=Dictyostelium discoideum GN=cpsf3 PE=3 SV=1) HSP 1 Score: 241.121 bits (614), Expect = 6.076e-63 Identity = 113/206 (54.85%), Postives = 151/206 (73.30%), Query Frame = 3 Query: 18 RPDINRSMDRIEVLDFHQTVEVNGIKFWCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAELPQFSPDICIIESTYGVQLHQPRNIRERRFTDVIHSTISQGGRVLIPAYALGRAQELLLILDEYWSNHPEFHNMPMYYASPLAKKCMAVYQTLLPSMNERIRPQFADSDAFKYKALAPSNSIDDLPDGRPADGDGSPG 635 + D++RS+++IE + + Q VE NGIK C+ AGHVLGAAMFM++IAGV++LYTGD+SR+EDRHL AE P D+ IIESTYGVQ+H+PR RE+RFT +H + + G+ LIP +ALGRAQELLLILDEYW +P+ H++P+YYAS LAKKCM VY+T + MN+R+R QF S+ F++K + I+ D P SPG Sbjct: 152 KSDLDRSLEKIEKVRYRQKVEHNGIKVTCFNAGHVLGAAMFMIEIAGVKILYTGDFSRQEDRHLMGAETPPVKVDVLIIESTYGVQVHEPRLEREKRFTSSVHQVVERNGKCLIPVFALGRAQELLLILDEYWIANPQLHHVPIYYASALAKKCMGVYRTYINMMNDRVRAQFDVSNPFEFKHIKNIKGIESFDDRGPCVFMASPG 357
BLAST of EY720761 vs. ExPASy Swiss-Prot
Match: YSH1_SCHPO (Endoribonuclease ysh1 OS=Schizosaccharomyces pombe GN=ysh1 PE=2 SV=1) HSP 1 Score: 234.187 bits (596), Expect = 7.427e-61 Identity = 114/215 (53.02%), Postives = 151/215 (70.23%), Query Frame = 3 Query: 24 DINRSMDRIEVLDFHQTVEVNGIKFWCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAELPQFSPDICIIESTYGVQLHQPRNIRERRFTDVIHSTISQGGRVLIPAYALGRAQELLLILDEYWSNHPEFHNMPMYYASPLAKKCMAVYQTLLPSMNERIRPQFADSDAFKYKALAPSNSIDDLPDGRPADGDGSPGWATEWPAPTLL 668 D+ + DRIE +D+H T+EV GIKF Y AGHVLGA M+ V++AGV +L+TGDYSREEDRHL AE+P PD+ I ESTYG HQPR +E R ++IHSTI GGRVL+P +ALGRAQELLLILDEYW+NH + ++P+YYAS LA+KCMA++QT + MN+ IR FA+ + F ++ + +++ D P+ SPG + TLL Sbjct: 152 DLLAAFDRIEAVDYHSTIEVEGIKFTPYHAGHVLGACMYFVEMAGVNILFTGDYSREEDRHLHVAEVPPKRPDVLITESTYGTASHQPRLEKEARLLNIIHSTIRNGGRVLMPVFALGRAQELLLILDEYWNNHLDLRSVPIYYASSLARKCMAIFQTYVNMMNDNIRKIFAERNPFIFRFVKSLRNLEKFDDIGPSVILASPGMLQNGVSRTLL 366
BLAST of EY720761 vs. ExPASy Swiss-Prot
Match: YSH1_KLULA (Endoribonuclease YSH1 OS=Kluyveromyces lactis GN=YSH1 PE=3 SV=1) HSP 1 Score: 234.187 bits (596), Expect = 7.427e-61 Identity = 115/209 (55.02%), Postives = 154/209 (73.68%), Query Frame = 3 Query: 24 DINRSMDRIEVLDFHQTVEVNGIKFWCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAELPQFSPDICIIESTYGVQLHQPRNIRERRFTDVIHSTISQGGRVLIPAYALGRAQELLLILDEYWSNHPE---FHNMPMYYASPLAKKCMAVYQTLLPSMNERIRPQFADS--DAFKYKALAPSNSIDDLPDGRPADGDGSPG 635 D+ S DRIE +D+H T+EVNGIKF + AGHVLGAAMF ++IAGVRVL+TGDYSRE DRHL +AE+P S D+ I+EST+G H+PR RER+ T +IH+ +S+GGRVL+P +ALGRAQE++LILDEYW NH E +P++YAS LAKKCM+V+QT + MN+ IR +F DS + F +K ++ ++D+ D P+ SPG Sbjct: 136 DLAESFDRIETIDYHSTMEVNGIKFTAFHAGHVLGAAMFQIEIAGVRVLFTGDYSREVDRHLNSAEVPPQSSDVIIVESTFGTATHEPRQNRERKLTQLIHTVVSKGGRVLLPVFALGRAQEIMLILDEYWQNHKEELGNGQVPIFYASNLAKKCMSVFQTYVNMMNDDIRKKFKDSQTNPFIFKNISYLKNLDEFEDFGPSVMLASPG 344
BLAST of EY720761 vs. ExPASy Swiss-Prot
Match: YSH1_YARLI (Endoribonuclease YSH1 OS=Yarrowia lipolytica GN=YSH1 PE=3 SV=2) HSP 1 Score: 233.802 bits (595), Expect = 9.700e-61 Identity = 113/217 (52.07%), Postives = 150/217 (69.12%), Query Frame = 3 Query: 24 DINRSMDRIEVLDFHQTVEVNGIKFWCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAELPQFSPDICIIESTYGVQLHQPRNIRERRFTDVIHSTISQGGRVLIPAYALGRAQELLLILDEYWSNHPEFHNMPMYYASPLAKKCMAVYQTLLPSMNERIRPQFAD--SDAFKYKALAPSNSIDDLPDGRPADGDGSPGWATEWPAPTLL 668 D+ S ++IE +D+H T+EVNG+KF Y AGHVLGAAM+ +++ GV+VL+TGDYSREEDRHL AE+P PDI I ESTYG H PR RE+R T +IHST+ +GG+ L+P +ALGRAQE+LLILDEYW HP+ +YYAS LAKKC+AVYQT + MN+ IR +F D ++ F++K + ++D D P SPG + +LL Sbjct: 153 DLTASFNKIETIDYHSTMEVNGVKFTAYHAGHVLGAAMYTIEVGGVKVLFTGDYSREEDRHLNQAEVPPMKPDILICESTYGTGTHLPRLEREQRLTGLIHSTLDKGGKCLLPVFALGRAQEILLILDEYWEAHPDLQEFSIYYASALAKKCIAVYQTYINMMNDNIRRRFRDQKTNPFRFKYIKNIKNLDRFDDMGPCVMVASPGMLQSGVSRSLL 369
BLAST of EY720761 vs. ExPASy Swiss-Prot
Match: YSH1_ASHGO (Endoribonuclease YSH1 OS=Ashbya gossypii GN=YSH1 PE=3 SV=1) HSP 1 Score: 233.802 bits (595), Expect = 9.700e-61 Identity = 113/212 (53.30%), Postives = 156/212 (73.58%), Query Frame = 3 Query: 15 TRPDINRSMDRIEVLDFHQTVEVNGIKFWCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAELPQFSPDICIIESTYGVQLHQPRNIRERRFTDVIHSTISQGGRVLIPAYALGRAQELLLILDEYWSNHPE---FHNMPMYYASPLAKKCMAVYQTLLPSMNERIRPQFADS--DAFKYKALAPSNSIDDLPDGRPADGDGSPG 635 T D+ S DRIE +D+H T++VNGIKF Y AGHVLGAAMF V+IAG+R+L+TGDYSRE DRHL +AE+P DI I+EST+G H+PR +E++ T +IH+T+S+GGRVL+P +ALGRAQE++LILDEYWS H E +P++YAS LA+KCM+V+QT + MN++IR +F DS + F +K ++ ++D+ D P+ SPG Sbjct: 130 TDEDLAESFDRIETVDYHSTIDVNGIKFTAYHAGHVLGAAMFQVEIAGLRILFTGDYSRELDRHLNSAEIPTLPSDILIVESTFGTATHEPRTSKEKKLTQLIHTTVSKGGRVLLPVFALGRAQEIMLILDEYWSQHAEQLGNGQVPIFYASNLARKCMSVFQTYVNMMNDKIRKKFRDSQTNPFIFKNISYLKNLDEFQDFGPSVMLASPG 341
BLAST of EY720761 vs. ExPASy Swiss-Prot
Match: YSH1_USTMA (Endoribonuclease YSH1 OS=Ustilago maydis GN=YSH1 PE=3 SV=1) HSP 1 Score: 228.794 bits (582), Expect = 3.120e-59 Identity = 111/203 (54.68%), Postives = 146/203 (71.92%), Query Frame = 3 Query: 36 SMDRIEVLDFHQTVEV-NGIKFWCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAELPQFSPDICIIESTYGVQLHQPRNIRERRFTDVIHSTISQGGRVLIPAYALGRAQELLLILDEYWSNHPEFHNMPMYYASPLAKKCMAVYQTLLPSMNERIRPQFADSD-AFKYKALAPSNSIDDLPDGRPADGDGSPGW 638 S +IE +DFHQ V + G++F Y AGHVLGA MF+++IAG+R+LYTGD+SREEDRHL AE+P PD+ I ESTYG Q H+PR +E RFT IH I +GGRVL+P + LGRAQELLL+LDEYW+ HPE H++P+YYAS LAKKC++VYQT + +MN+ IR +F D F +K ++ S++ D P SPG+ Sbjct: 146 SWRQIEAVDFHQDVSIAGGLRFTSYHAGHVLGACMFLIEIAGLRILYTGDFSREEDRHLVQAEIPPVKPDVLICESTYGTQTHEPRLDKEHRFTSQIHHIIKRGGRVLLPVFVLGRAQELLLLLDEYWAAHPELHSVPIYYASALAKKCISVYQTYIHTMNDHIRTRFNRRDNPFVFKHISNLRSLEKFEDRGPCVMMASPGF 348
BLAST of EY720761 vs. ExPASy Swiss-Prot
Match: YSH1_CANGA (Endoribonuclease YSH1 OS=Candida glabrata GN=YSH1 PE=3 SV=1) HSP 1 Score: 228.409 bits (581), Expect = 4.075e-59 Identity = 111/209 (53.11%), Postives = 154/209 (73.68%), Query Frame = 3 Query: 24 DINRSMDRIEVLDFHQTVEVNGIKFWCYTAGHVLGAAMFMVDIAGVRVLYTGDYSREEDRHLRAAELPQFSPDICIIESTYGVQLHQPRNIRERRFTDVIHSTISQGGRVLIPAYALGRAQELLLILDEYWSNHPE---FHNMPMYYASPLAKKCMAVYQTLLPSMNERIRPQFADS--DAFKYKALAPSNSIDDLPDGRPADGDGSPG 635 D+ S D+IE +D+H ++VNGIKF + AGHVLGAAMF ++IAG+RVL+TGDYSRE DRHL +AE+P DI I+EST+G H+PR RE++ T +IHST+++GGRVL+P +ALGRAQEL+LILDEYWS H E + +P++YAS LA+KC++V+QT + MN+ IR +F DS + F +K +A ++D+ D P+ SPG Sbjct: 131 DLIESFDKIETIDYHSMIDVNGIKFTAFHAGHVLGAAMFQIEIAGLRVLFTGDYSREIDRHLNSAEVPPLPSDILIVESTFGTATHEPRLHREKKLTQLIHSTVNKGGRVLMPVFALGRAQELMLILDEYWSQHKEELGSNQIPIFYASNLARKCLSVFQTYVNMMNDNIRKKFRDSQTNPFIFKNIAYIKNLDEFQDFGPSVMLASPG 339 The following BLAST results are available for this feature:
BLAST of EY720761 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 36
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Sequences
The
following sequences are available for this feature:
EST sequence >EY720761 ID=EY720761; Name=EY720761; organism=Citrus sinensis; type=EST; length=871bpback to top |