EY720759

Overview
NameEY720759
Unique NameEY720759
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length843
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY720759 vs. ExPASy Swiss-Prot
Match: PUR6_PSEAE (Phosphoribosylaminoimidazole carboxylase catalytic subunit OS=Pseudomonas aeruginosa GN=purE PE=3 SV=2)

HSP 1 Score: 63.929 bits (154), Expect = 3.480e-17
Identity = 37/82 (45.12%), Postives = 41/82 (50.00%), Query Frame = -2 
Query:  249 GRPGQLTWQGRCAATTHRPVLRYPAQSSMLSGAHSLLSIVQMPAGIPWXXXXXXXXXXXXXXXXXXXXXXXKHPQFHPVLQK 494
            G  G     G CAA TH PVL  P QSSMLSG  SLLSIVQMPAG+P                        KHPQ+H  L++
Sbjct:   64 GAGGAAHLPGMCAAKTHLPVLGVPVQSSMLSGVDSLLSIVQMPAGVPVATLAIGKAGAVNAALLSASILGAKHPQYHEALKQ 145

HSP 2 Score: 35.4242 bits (80), Expect = 3.480e-17
Identity = 15/20 (75.00%), Postives = 18/20 (90.00%), Query Frame = -3 
Query:  194 KKFRAEQTDSVLDNPDPRIA 253
            K+FRA QT++VLDNPDPR A
Sbjct:  144 KQFRANQTETVLDNPDPRDA 163

HSP 3 Score: 30.0314 bits (66), Expect = 3.480e-17
Identity = 13/23 (56.52%), Postives = 16/23 (69.57%), Query Frame = -1 
Query:  472 YAEEPESRPIEVLSPGPAGAAHV 540
            YAEE E R +EV+  G  GAAH+
Sbjct:   49 YAEEAEGRGLEVIIAGAGGAAHL 71
[Close]
BLAST of EY720759 vs. ExPASy Swiss-Prot
Match: PURK_PSEAE (Phosphoribosylaminoimidazole carboxylase ATPase subunit OS=Pseudomonas aeruginosa GN=purK PE=3 SV=2)

HSP 1 Score: 53.1434 bits (126), Expect = 7.317e-11
Identity = 25/25 (100.00%), Postives = 25/25 (100.00%), Query Frame = -2 
Query:  105 MKIGVIGGGQLGRMLALAGTPLGMN 179
            MKIGVIGGGQLGRMLALAGTPLGMN
Sbjct:    1 MKIGVIGGGQLGRMLALAGTPLGMN 25

HSP 2 Score: 35.039 bits (79), Expect = 7.317e-11
Identity = 16/33 (48.48%), Postives = 18/33 (54.55%), Query Frame = -1 
Query:    1 FXGPGAGRLPGCAG*HLRAXYSDPDHLRQLADE 99
            F  P         G H+RA Y D +HLRQLADE
Sbjct:   28 FLDPAPDACAASLGEHIRADYGDQEHLRQLADE 60
The following BLAST results are available for this feature:
BLAST of EY720759 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
PUR6_PSEAE3.480e-1745.12Phosphoribosylaminoimidazole carboxylase catalytic... [more]
PURK_PSEAE7.317e-11100.00Phosphoribosylaminoimidazole carboxylase ATPase su... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-703-013-H09-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720759 ID=EY720759; Name=EY720759; organism=Citrus sinensis; type=EST; length=843bp
TTCATCGGCCAGTTGGCGCAGGTGATCCGGGTCGCTGTANTCAGCCCGCA
GGTGTCACCCAGCGCAGCCGGGCAGGCGTCCGGCGCCGGGTCCANGAAAG
CGAAGTTCATCCCCAGCGGCGTACCCGCCAGGGCCAGCATGCGGCCCAGT
TGGCCGCCACCGATTACACCGATTTTCATCGTCAACAACCTCAGGCAATG
CGTGGGTCTGGATTGTCCAGGACGCTGTCTGTCTGTTCAGCACGGAATTT
TTTGCAGCACCGGGTGGAACTGCGGGTGCTTGGCGCCGAGGATGCTGGCG
GACAGCAATGCTGCGTTGATCGCGCCGGCCTTGGCGATCGCAAGGGTGGC
CCACGGAATACCGGCGGGCATCTGCACGATGGACAACAGCGAATGCGCGC
CCGAGAGCATCGACGACTGCGCCGGATAGCGCAGTACTGGCCGGTGAGTC
GTGGCCGCACACCTGCCTTGCCACGTGAGCTGCCCCGGCCGGCCCCGGCG
ATAACACCTCAATGGGCCGGGATTCTGGTTCCTCGGCATAATGGGACCCC
CACTCCTGGGTGGCGGTGGGCGGGGACCACCTGCGGCTGCTGGGGGTGGG
GCGTGGTGGCCCACATCTCCGCAGTCTCGCTGGGTGGTGGAGCCAAGCGC
CTGGTGGGCCGTGGGGGGGGGGGGGGGGGGGTCGGTGGGGGGGGCGGTCG
TCTCTCGGGCTCCCTCCCGCCCGCAGCTCGCCCCGGGCCACGCGTGGTTG
TCCCGTGGGGAGTTGATCGGCACTGTTGGGGAATCGACCGACGGAGAGGA
GGGGCTGCCAGTGGAGGGGTGGCAGCCTTCGACTCCGGGCACC
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