EY720722

Overview
NameEY720722
Unique NameEY720722
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length888
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720722 vs. ExPASy Swiss-Prot
Match: GLNA1_ALNGL (Glutamine synthetase OS=Alnus glutinosa GN=GLN1 PE=2 SV=1)

HSP 1 Score: 182.956 bits (463), Expect = 2.032e-45
Identity = 85/95 (89.47%), Postives = 90/95 (94.74%), Query Frame = 3
Query:   15 GFEVIKKAIDKLGLRHSEHIAAYGEGNERRLTGKHETADINTFKWGVANRGASIRVGRHTHKEGKGYFEDRRPAPNMDPYVVTSMIAETTMLWNP 299
            G+E+IKKAI+KLGLRH EHIAAYGEGNERRLTG+HETADINTFKWGVANRGASIRVGR T KEGKGYFEDRRPA NMDPYVVTSMIAETT+LW P
Sbjct:  262 GYEIIKKAIEKLGLRHKEHIAAYGEGNERRLTGRHETADINTFKWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTLLWKP 356          
BLAST of EY720722 vs. ExPASy Swiss-Prot
Match: GLN11_ARATH (Glutamine synthetase cytosolic isozyme 1-1 OS=Arabidopsis thaliana GN=GLN1-1 PE=1 SV=2)

HSP 1 Score: 182.185 bits (461), Expect = 3.466e-45
Identity = 85/95 (89.47%), Postives = 89/95 (93.68%), Query Frame = 3
Query:   15 GFEVIKKAIDKLGLRHSEHIAAYGEGNERRLTGKHETADINTFKWGVANRGASIRVGRHTHKEGKGYFEDRRPAPNMDPYVVTSMIAETTMLWNP 299
            G+E+IKKAIDKLGLRH EHIAAYGEGNERRLTG HETADINTF WGVANRGASIRVGR T KEGKGYFEDRRPA NMDPY+VTSMIAETT+LWNP
Sbjct:  262 GYEIIKKAIDKLGLRHKEHIAAYGEGNERRLTGHHETADINTFLWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYIVTSMIAETTILWNP 356          
BLAST of EY720722 vs. ExPASy Swiss-Prot
Match: GLNA1_LOTJA (Glutamine synthetase cytosolic isozyme OS=Lotus japonicus GN=GLN1 PE=2 SV=2)

HSP 1 Score: 180.644 bits (457), Expect = 1.008e-44
Identity = 85/95 (89.47%), Postives = 89/95 (93.68%), Query Frame = 3
Query:   15 GFEVIKKAIDKLGLRHSEHIAAYGEGNERRLTGKHETADINTFKWGVANRGASIRVGRHTHKEGKGYFEDRRPAPNMDPYVVTSMIAETTMLWNP 299
            G+EVIKKAIDKLGLRH EHIAAYGEGNERRLTG+HETADINTF WGVANRGASIRVGR T KEGKGYFEDRRPA NMDPYVVTSMIA+TT+LW P
Sbjct:  262 GYEVIKKAIDKLGLRHKEHIAAYGEGNERRLTGRHETADINTFLWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIADTTILWKP 356          
BLAST of EY720722 vs. ExPASy Swiss-Prot
Match: GLN12_ARATH (Glutamine synthetase cytosolic isozyme 1-2 OS=Arabidopsis thaliana GN=GLN1-2 PE=1 SV=2)

HSP 1 Score: 180.259 bits (456), Expect = 1.317e-44
Identity = 84/95 (88.42%), Postives = 89/95 (93.68%), Query Frame = 3
Query:   15 GFEVIKKAIDKLGLRHSEHIAAYGEGNERRLTGKHETADINTFKWGVANRGASIRVGRHTHKEGKGYFEDRRPAPNMDPYVVTSMIAETTMLWNP 299
            G+E+IKKAI+KLGLRH EHI+AYGEGNERRLTG HETADINTF WGVANRGASIRVGR T KEGKGYFEDRRPA NMDPYVVTSMIAETT+LWNP
Sbjct:  262 GYEIIKKAIEKLGLRHKEHISAYGEGNERRLTGHHETADINTFLWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTLLWNP 356          
BLAST of EY720722 vs. ExPASy Swiss-Prot
Match: GLNA1_VITVI (Glutamine synthetase cytosolic isozyme 1 OS=Vitis vinifera GN=GS1-1 PE=2 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 2.934e-44
Identity = 85/95 (89.47%), Postives = 88/95 (92.63%), Query Frame = 3
Query:   15 GFEVIKKAIDKLGLRHSEHIAAYGEGNERRLTGKHETADINTFKWGVANRGASIRVGRHTHKEGKGYFEDRRPAPNMDPYVVTSMIAETTMLWNP 299
            GFEVIKKAI+KLGLRH EHIAAYGEGNERRLTG+HETADINTF WGVANRGASIRVGR T K GKGYFEDRRPA NMDPYVVTSMIAETT+LW P
Sbjct:  262 GFEVIKKAIEKLGLRHKEHIAAYGEGNERRLTGRHETADINTFLWGVANRGASIRVGRDTEKAGKGYFEDRRPASNMDPYVVTSMIAETTILWKP 356          
BLAST of EY720722 vs. ExPASy Swiss-Prot
Match: GLNA2_VITVI (Glutamine synthetase cytosolic isozyme 2 OS=Vitis vinifera GN=GS1-2 PE=2 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 5.004e-44
Identity = 83/95 (87.37%), Postives = 89/95 (93.68%), Query Frame = 3
Query:   15 GFEVIKKAIDKLGLRHSEHIAAYGEGNERRLTGKHETADINTFKWGVANRGASIRVGRHTHKEGKGYFEDRRPAPNMDPYVVTSMIAETTMLWNP 299
            G+E+IKKAI+KLGLRH EHIAAYGEGNERRLTG+HETADINTF WGVANRGASIRVGR T KEGKGYFEDRRPA NMDPYVVTSMIAE+T+LW P
Sbjct:  262 GYEIIKKAIEKLGLRHKEHIAAYGEGNERRLTGRHETADINTFLWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAESTILWKP 356          
BLAST of EY720722 vs. ExPASy Swiss-Prot
Match: GLN12_ORYSJ (Glutamine synthetase cytosolic isozyme 1-2 OS=Oryza sativa subsp. japonica GN=GLN1-2 PE=1 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 5.004e-44
Identity = 84/93 (90.32%), Postives = 87/93 (93.55%), Query Frame = 3
Query:   15 GFEVIKKAIDKLGLRHSEHIAAYGEGNERRLTGKHETADINTFKWGVANRGASIRVGRHTHKEGKGYFEDRRPAPNMDPYVVTSMIAETTMLW 293
            G+EVIKKAIDKL LRH EHIAAYGEGNERRLTG+HETADINTFKWGVANRGASIRVGR T KEGKGYFEDRRPA NMDPYVVT MIAETT+LW
Sbjct:  262 GYEVIKKAIDKLALRHKEHIAAYGEGNERRLTGRHETADINTFKWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTGMIAETTLLW 354          
BLAST of EY720722 vs. ExPASy Swiss-Prot
Match: GLNA_LACSA (Glutamine synthetase OS=Lactuca sativa PE=2 SV=2)

HSP 1 Score: 177.948 bits (450), Expect = 6.536e-44
Identity = 84/94 (89.36%), Postives = 89/94 (94.68%), Query Frame = 3
Query:   15 GFEVIKKAIDKLGLRHSEHIAAYGEGNERRLTGKHETADINTFKWGVANRGASIRVGRHTHKEGKGYFEDRRPAPNMDPYVVTSMIAETTMLWN 296
            G+EVIKKAI+KLGLRH EHIAAYGEGNERRLTG+HETADINTF WGVANRGASIRVGR T KEGKGYFEDRRPA NMDPYVVTSMIAETT+LW+
Sbjct:  262 GYEVIKKAIEKLGLRHKEHIAAYGEGNERRLTGRHETADINTFLWGVANRGASIRVGRDTEKEGKGYFEDRRPASNMDPYVVTSMIAETTILWD 355          
BLAST of EY720722 vs. ExPASy Swiss-Prot
Match: GLNA3_MEDSA (Glutamine synthetase nodule isozyme OS=Medicago sativa GN=GS1 PE=2 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 6.536e-44
Identity = 81/95 (85.26%), Postives = 88/95 (92.63%), Query Frame = 3
Query:   15 GFEVIKKAIDKLGLRHSEHIAAYGEGNERRLTGKHETADINTFKWGVANRGASIRVGRHTHKEGKGYFEDRRPAPNMDPYVVTSMIAETTMLWNP 299
            G+E+IKKAI+KLGLRH EHIAAYGEGNERRLTGKHET DINTF WGVANRGAS+RVGR T K+GKGYFEDRRP+ NMDPYVVTSMIAETT+LW P
Sbjct:  262 GYEIIKKAIEKLGLRHKEHIAAYGEGNERRLTGKHETTDINTFSWGVANRGASVRVGRDTEKDGKGYFEDRRPSSNMDPYVVTSMIAETTLLWKP 356          
BLAST of EY720722 vs. ExPASy Swiss-Prot
Match: GLNA2_PHAVU (Glutamine synthetase PR-2 OS=Phaseolus vulgaris PE=2 SV=1)

HSP 1 Score: 176.792 bits (447), Expect = 1.456e-43
Identity = 81/95 (85.26%), Postives = 89/95 (93.68%), Query Frame = 3
Query:   15 GFEVIKKAIDKLGLRHSEHIAAYGEGNERRLTGKHETADINTFKWGVANRGASIRVGRHTHKEGKGYFEDRRPAPNMDPYVVTSMIAETTMLWNP 299
            G+EVIKKAI+KLGLRH EHIAAYG+GNERRLTG+HETADINTF WGVANRG+S+RVGR T K+GKGYFEDRRPA NMDPYVVTSMIAETT+LW P
Sbjct:  262 GYEVIKKAIEKLGLRHKEHIAAYGKGNERRLTGRHETADINTFSWGVANRGSSVRVGRDTEKQGKGYFEDRRPASNMDPYVVTSMIAETTILWKP 356          
The following BLAST results are available for this feature:
BLAST of EY720722 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 87
Match NameE-valueIdentityDescription
GLNA1_ALNGL2.032e-4589.47Glutamine synthetase OS=Alnus glutinosa GN=GLN1 PE... [more]
GLN11_ARATH3.466e-4589.47Glutamine synthetase cytosolic isozyme 1-1 OS=Arab... [more]
GLNA1_LOTJA1.008e-4489.47Glutamine synthetase cytosolic isozyme OS=Lotus ja... [more]
GLN12_ARATH1.317e-4488.42Glutamine synthetase cytosolic isozyme 1-2 OS=Arab... [more]
GLNA1_VITVI2.934e-4489.47Glutamine synthetase cytosolic isozyme 1 OS=Vitis ... [more]
GLNA2_VITVI5.004e-4487.37Glutamine synthetase cytosolic isozyme 2 OS=Vitis ... [more]
GLN12_ORYSJ5.004e-4490.32Glutamine synthetase cytosolic isozyme 1-2 OS=Oryz... [more]
GLNA_LACSA6.536e-4489.36Glutamine synthetase OS=Lactuca sativa PE=2 SV=2[more]
GLNA3_MEDSA6.536e-4485.26Glutamine synthetase nodule isozyme OS=Medicago sa... [more]
GLNA2_PHAVU1.456e-4385.26Glutamine synthetase PR-2 OS=Phaseolus vulgaris PE... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-013-D12-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720722 ID=EY720722; Name=EY720722; organism=Citrus sinensis; type=EST; length=888bp
CACCCACGCGTCCGGGCTTTGAGGTTATTAAGAAAGCCATCGACAAACTT
GGACTGAGGCACAGTGAGCACATTGCCGCATATGGTGAAGGCAATGAACG
CCGACTCACTGGCAAACATGAAACAGCTGACATCAACACTTTCAAATGGG
GTGTTGCTAACCGTGGGGCATCAATCCGTGTTGGACGACACACACACAAA
GAAGGAAAGGGTTACTTTGAGGACAGGAGACCTGCTCCTAACATGGATCC
ATATGTTGTCACCTCCATGATTGCAGAAACCACTATGCTGTGGAACCCAT
GAATGCTCCTCTAGCACACCTTGAAATATCCTGTTTGATCTGCTGGCTTC
ACTCAAGATTCACGAGTTCCCCACAGAATCGTGTCCTCCTCAAGGATGCT
CCAATACCACTAGTTCCCCTCTTGTCCTGTTCCCATCCCTGCCCCCGGTT
ATCGCGCAGGGGGTCCCACGCCGCCAGCCCGTCACACCGGGACGAATAAC
GGGCCCGCCCAAGTTACGATGATTGGCGGACGGCCCACACCCCACCCACA
AACCCCAGTCTCCCCCCACAACAACCCACCCCGCGTCCCGGCGCCAAAAC
CCACTACCCGAGGGCGGGCCCTCACCCACCTCCACTCAGGCGCACCCCGC
CCCCGCCCACCCCCACCCATCCCTTACGCGCACCCCAAATCCCCTCCCCC
GGCCGACGCTGCTGGGCGGACCACAACGCGGAGACCCCCGGTACCGTCGG
TCCAGACCCGGACCGGCCCACCCCGCGCACACGCGCACACCCAAATATAG
CATCACCCGCCCGCACAATTTCACCAACACCTACACCGCCCACACAACCC
CCCCCCAAGGGAAAGCACACCCCCGATGCCCACTCTCG
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