EY720703

Overview
NameEY720703
Unique NameEY720703
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length897
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720703 vs. ExPASy Swiss-Prot
Match: WRBA_SYNFM (Flavoprotein wrbA OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=wrbA PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.489e-12
Identity = 34/81 (41.98%), Postives = 50/81 (61.73%), Query Frame = 1
Query:  442 LKIFIIFYSMYGHVEILARRMKKGVDSIDGXEGVLYXIPETLPXEVLXQM---KVPXKGIEVPVIXVDDLVHADGLLCGVP 675
            +K+ I+FYSMYGH+  +A  + +GV S+DG E VL  +PETL  E+L  M   +   +   +PV  VD+L  AD ++ G P
Sbjct:    1 MKVLIVFYSMYGHIYRMAEAVAEGVRSVDGAEAVLRRVPETLSAEILASMGATEAQKQFAHIPVCTVDELGAADAVIFGTP 81          

HSP 2 Score: 25.0238 bits (53), Expect = 1.489e-12
Identity = 10/14 (71.43%), Postives = 11/14 (78.57%), Query Frame = 2
Query:  668 GCPTRFGSMASTMR 709
            G PTRFG+MA  MR
Sbjct:   79 GTPTRFGNMAGQMR 92          
BLAST of EY720703 vs. ExPASy Swiss-Prot
Match: WRBA_GEOMG (Flavoprotein wrbA OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=wrbA PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 2.512e-12
Identity = 35/81 (43.21%), Postives = 49/81 (60.49%), Query Frame = 1
Query:  442 LKIFIIFYSMYGHVEILARRMKKGVDSIDGXEGVLYXIPETLPXEVLXQMKV--PXKGI-EVPVIXVDDLVHADGLLCGVP 675
            +K+ I FYSMYGH+  +A  + +GV  + G E VL  +PETLP +VL +M    P K    +PV  VD+L  AD ++ G P
Sbjct:    1 MKVLIPFYSMYGHIYRMAEAVAEGVREVSGAEAVLRRVPETLPTDVLQKMGAVEPQKAFAHIPVCTVDELAAADAIIFGTP 81          

HSP 2 Score: 25.409 bits (54), Expect = 2.512e-12
Identity = 19/53 (35.85%), Postives = 27/53 (50.94%), Query Frame = 2
Query:  668 GCPTRFGSMASTMR----ACFGIYIP--LRGSPHGLRGVAAGMLGGRGITL*T 808
            G PTRFG+M   MR    A  G+++   L G   G+   +A   GG+  T+ T
Sbjct:   79 GTPTRFGNMCGQMRQFLDATGGLWVKGGLVGKAGGVFTSSATQHGGQESTILT 131          
BLAST of EY720703 vs. ExPASy Swiss-Prot
Match: YCP4_YEAST (Flavoprotein-like protein YCP4 OS=Saccharomyces cerevisiae GN=YCP4 PE=1 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.502e-11
Identity = 44/118 (37.29%), Postives = 61/118 (51.69%), Query Frame = 1
Query:  442 LKIFIIFYSMYGHVEILARRMKKGVDSIDGXEGVLYXIPETLPXEVLXQMKVPXKGIEVPVIXVDDLVHADGLLCGVPDQVWIHGIHNEGLFWNLHSTSWEPPRASWRGCGDAWWEGN 795
            +KI II YS YGH+++LA+ +KKGV++  G   + Y + ETLP EVL +M  P K  ++PV     L+  D  L GVP +           F NL    W    A W   G  W +G+
Sbjct:    2 VKIAIITYSTYGHIDVLAQAVKKGVEAAGGKADI-YRVEETLPDEVLTKMNAPQKPEDIPVATEKTLLEYDAFLFGVPTR-----------FGNL-PAQWS---AFWDKTGGLWAKGS 103          
BLAST of EY720703 vs. ExPASy Swiss-Prot
Match: WRBA_GEOSL (Flavoprotein wrbA OS=Geobacter sulfurreducens GN=wrbA PE=3 SV=1)

HSP 1 Score: 64.6994 bits (156), Expect = 2.031e-11
Identity = 32/81 (39.51%), Postives = 48/81 (59.26%), Query Frame = 1
Query:  442 LKIFIIFYSMYGHVEILARRMKKGVDSIDGXEGVLYXIPETLPXEVLXQMKV--PXKGI-EVPVIXVDDLVHADGLLCGVP 675
            + + I++YSMYGH+  +A  + +GV  + G E VL  +PETL  +VL +M    P K    +PV  VD+L  AD ++ G P
Sbjct:    1 MNVLIVYYSMYGHIHRMAEAVAEGVREVPGAEAVLRRVPETLSPDVLEKMGAVEPQKAFAHIPVATVDELASADAIIFGTP 81          

HSP 2 Score: 25.409 bits (54), Expect = 2.031e-11
Identity = 19/53 (35.85%), Postives = 27/53 (50.94%), Query Frame = 2
Query:  668 GCPTRFGSMASTMR----ACFGIYI--PLRGSPHGLRGVAAGMLGGRGITL*T 808
            G PTRFG+M   MR    A  G+++   L G   G+   +A   GG+  T+ T
Sbjct:   79 GTPTRFGNMCGQMRQFLDATGGLWVKGSLVGKAAGVFTSSATQHGGQESTILT 131          
BLAST of EY720703 vs. ExPASy Swiss-Prot
Match: WRBA_RHORT (Flavoprotein wrbA OS=Rhodospirillum rubrum (strain ATCC 11170 / NCIB 8255) GN=wrbA PE=3 SV=1)

HSP 1 Score: 62.3882 bits (150), Expect = 5.776e-11
Identity = 28/77 (36.36%), Postives = 45/77 (58.44%), Query Frame = 1
Query:  445 KIFIIFYSMYGHVEILARRMKKGVDSIDGXEGVLYXIPETLPXEVLXQMKVPXKGIEVPVIXVDDLVHADGLLCGVP 675
            K+ +++YSMYGH++ LA+ +  GV  +DG E  L  +PE +  E+L  +       + P+  VD+L   DG+L G P
Sbjct:    6 KVLVLYYSMYGHIDTLAKEIAAGVAEVDGVEVALKRVPEHMSAELLSTIHA-RTDFDTPIASVDELADYDGILIGTP 81          

HSP 2 Score: 26.1794 bits (56), Expect = 5.776e-11
Identity = 10/15 (66.67%), Postives = 12/15 (80.00%), Query Frame = 2
Query:  665 VGCPTRFGSMASTMR 709
            +G PTRFG+MA  MR
Sbjct:   78 IGTPTRFGNMAGQMR 92          
The following BLAST results are available for this feature:
BLAST of EY720703 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
WRBA_SYNFM1.489e-1241.98Flavoprotein wrbA OS=Syntrophobacter fumaroxidans ... [more]
WRBA_GEOMG2.512e-1243.21Flavoprotein wrbA OS=Geobacter metallireducens (st... [more]
YCP4_YEAST1.502e-1137.29Flavoprotein-like protein YCP4 OS=Saccharomyces ce... [more]
WRBA_GEOSL2.031e-1139.51Flavoprotein wrbA OS=Geobacter sulfurreducens GN=w... [more]
WRBA_RHORT5.776e-1136.36Flavoprotein wrbA OS=Rhodospirillum rubrum (strain... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-703-013-B09-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720703 ID=EY720703; Name=EY720703; organism=Citrus sinensis; type=EST; length=897bp
CCACGCGTCCGCGCACGACATGCCAGCCATTACAGACCGACGACCAGCTC
AAAAGGAAAGTCACTCAAGTTCTGTTCACATGCACAACTCCGGGTTCCAT
CTTCGTCTACTGTTCTTGTTTTTCTTTTTGATTATATATTATATGCAAAT
TGATACAAAACTCACAATCTTGGTTTATCTTGTCACTCAGTCTCTGATCA
CTGTGCCTTTTGTAAACATATTTCAAGCAGTGCCCACCAGTCAAGAATCT
TGACTCAACATTGTCACTAGTACAGGAAAAGCTCAGAATCATATTAAGAT
CTAATGGGAAAAGGAGGTGGATGTTTCCCAAGCAAGAAAAAGTTTGCAAT
TGATATGCCAGAGCAAGATCCTTCAAACCCAGACGGAGTAAGTTCTAATC
TTGACCAAAACCAACTTACAACTACAAGCACAACAGGACAACTTAAAATT
TTCATAATCTTTTACTCAATGTATGGCCATGTGGAGATTTTGGCAAGAAG
AATGAAGAAGGGAGTGGATTCTATTGATGGANTTGAAGGGGTTTTGTATA
NAATACCGGAAACGTTGCCANCGGAGGTTTTGGANCAAATGAAGGTGCCC
CANAAGGGCATTGAGGTGCCTGTAATANCTGTTGATGATTTGGTTCATGC
TGATGGTTTGTTGTGTGGGGTGCCCGACCAGGTTTGGATCCATGGCATCC
ACAATGAGGGCCTGTTTTGGAATCTACATTCCACTTCGTGGGAGCCCCCA
CGGGCTTCGTGGCGTGGCTGCGGGGATGCTTGGTGGGAGGGGAATCACCC
TGTAGACACCCATGGGATGGTTTACAGCCACTGGGTATCCCGTTGGGCCA
CAATGTCCTGGAGTTATTCCGAGAGAGGAGGATTCGAAGAGGGTCGC
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