EY720697

Overview
NameEY720697
Unique NameEY720697
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length874
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720697 vs. ExPASy Swiss-Prot
Match: FB121_ARATH (F-box protein At2g32560 OS=Arabidopsis thaliana GN=At2g32560 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 7.098e-27
Identity = 61/144 (42.36%), Postives = 88/144 (61.11%), Query Frame = 1
Query:   43 MLFFLISCFSVILLSKSLAKPPMKSDWRLLSPWFWRELSSFLVSWFQKGGLVIRPLKQKMSFGSKPANTEKEKISLLDLPDLTLECILEKLSPAGLCNMAGVCSSLRDRCTSDRLWEKHMKQKWGRVIGDVAKREWQWHLGLQT 474
            +L+FLI+C S    +KSL+ PP            W   +  L+S++      +  L Q       PA+   +++S+LDLP+L L+CIL+ L P+GLC+MA VCSSLR+RC SD LWEKH+K KWG+++G  A REWQ ++   T
Sbjct:    2 LLYFLITCLSFFFFTKSLSLPP------------WASETKTLLSFYFIKNPFMNTLHQTKH---DPASPVIDQMSVLDLPELALDCILDLLPPSGLCSMARVCSSLRERCVSDHLWEKHLKTKWGKILGPAAHREWQCYISSST 130          
BLAST of EY720697 vs. ExPASy Swiss-Prot
Match: FB132_ARATH (F-box protein At2g41170 OS=Arabidopsis thaliana GN=At2g41170 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 1.025e-25
Identity = 81/229 (35.37%), Postives = 111/229 (48.47%), Query Frame = 1
Query:  166 LVSWFQKGGLV--IRPLKQKMSFGSKPANTEKE-KISLLDLPDLTLECILEKLSPAGLCNMAGVCSSLRDRCTSDRLWEKHMKQKWGRVIGDVAKREWQWHLG-----LQTEIQPYE*QEPTGFSGSLYSLWAFSW--SDQRPRAIWSRKFLTPY-SILGLVVPPETGNSGSQLRSIPAKKGLLGLCWPC-KMLIHPSFPDHLFSGQVSPPGTTIGQGIFPWVRRHPAR 816
            +VSW  +  +   IR L  +     K  N E E K+SLLDLPDLTL+CILEKLSP+ LC M  VCS LRD+C SD LWEKHM+ KWGR++GD A +EW+ H+      L +        +P   S  + +L  F+W  S+       S  +L P  S++      E G      +    + G +G    C    I   F    F  + S  G    +    W R  P++
Sbjct:   22 IVSWLARSIIRNGIRTLTWRKETKRKKKNQEDENKMSLLDLPDLTLDCILEKLSPSELCAMTSVCSELRDKCVSDHLWEKHMETKWGRLMGDAAIQEWKSHVATIMRCLTSSSSSSRKSKPNWSSRFVANLKPFAWLSSNHGCENRGSSSYLAPIDSVMYWYSNLENGKFWFPAQVYNRENGHVGFMMSCYDAKIRYDFKTDTFQARYSAHGRRAAEEKVTWQRLRPSQ 250          
BLAST of EY720697 vs. ExPASy Swiss-Prot
Match: FB118_ARATH (F-box protein At2g26850 OS=Arabidopsis thaliana GN=At2g26850 PE=2 SV=1)

HSP 1 Score: 112.849 bits (281), Expect = 2.524e-24
Identity = 64/154 (41.56%), Postives = 84/154 (54.55%), Query Frame = 1
Query:   43 MLFFLISCFSVILLSKSLAKPPMKSDWRLLSPWFWRELSSFLVSWFQKGGLVIRPLKQKMSFGSKPANTEKEKISLLDLPDLTLECILEKLSPAGLCNMAGVCSSLRDRCTSDRLWEKHMKQKWGRVIGDVAKREWQWHLGLQTEIQPYE*QEP 504
            +L+ LI+C S    SKSL+ P             W   +  L+S++    L    L Q     + P      K+S+LDLPDL L+CILE L P+ LC MA VCSSLR+RC SD LWEKH+K KWG+++G  A +EWQ +L       PY    P
Sbjct:    2 LLYLLITCLSFFFFSKSLSFPQ------------WASKTKNLLSFYFSKYLFTNSLHQITPDLASPV---LGKMSILDLPDLPLDCILELLPPSELCTMARVCSSLRERCVSDHLWEKHLKTKWGKILGPSAHKEWQCYLS-----SPYHLDSP 135          
The following BLAST results are available for this feature:
BLAST of EY720697 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
FB121_ARATH7.098e-2742.36F-box protein At2g32560 OS=Arabidopsis thaliana GN... [more]
FB132_ARATH1.025e-2535.37F-box protein At2g41170 OS=Arabidopsis thaliana GN... [more]
FB118_ARATH2.524e-2441.56F-box protein At2g26850 OS=Arabidopsis thaliana GN... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-703-013-B02-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720697 ID=EY720697; Name=EY720697; organism=Citrus sinensis; type=EST; length=874bp
CACCCACGCGTCCGCCCATTTAGAAATTAGCTCCCCGAGTCCATGCTTTT
CTTCTTGATTTCTTGTTTCTCTGTCATATTACTATCAAAGTCTTTGGCTA
AACCACCGATGAAGAGTGATTGGAGATTGTTGTCTCCATGGTTTTGGAGG
GAATTATCAAGCTTTTTGGTTTCGTGGTTTCAAAAAGGCGGCCTTGTCAT
TAGGCCATTGAAGCAGAAGATGAGTTTTGGATCAAAACCTGCAAATACGG
AGAAAGAGAAAATTTCCCTCTTGGATTTGCCTGATTTAACCTTGGAATGC
ATTCTTGAGAAGCTTTCACCAGCTGGTTTGTGTAACATGGCTGGAGTTTG
CAGTTCTCTTCGAGATAGATGTACAAGTGATCGTTTGTGGGAGAAACACA
TGAAGCAGAAATGGGGGAGAGTTATTGGTGATGTTGCCAAAAGAGAATGG
CAATGGCACTTGGGTCTCCAGACAGAGATCCAGCCTTATGAGTAACAAGA
ACCAACAGGATTTTCCGGGTCTCTCTATAGCCTGTGGGCTTTTTCTTGGA
GTGACCAAAGACCGAGAGCCATCTGGAGCCGGAAGTTCCTTACCCCTTAT
TCCATCCTGGGCTTGGTTGTTCCCCCTGAAACTGGGAATTCTGGGTCCCA
ACTCAGGTCTATACCCGCTAAAAAGGGCCTGTTGGGGTTATGCTGGCCTT
GTAAAATGCTCATTCATCCATCATTCCCCGACCATCTCTTTTCAGGCCAG
GTCTCCCCCCCTGGAACTACAATTGGTCAAGGAATATTTCCCTGGGTAAG
GCGTCACCCCGCCCGGTGTACCTCCTGAATTGTGCTTCCACATCCAATTT
GGCAATTAGATTCAGGGCTTGGCA
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