EY720687

Overview
NameEY720687
Unique NameEY720687
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length912
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720687 vs. ExPASy Swiss-Prot
Match: DRP3A_ARATH (Dynamin-related protein 3A OS=Arabidopsis thaliana GN=DRP3A PE=1 SV=2)

HSP 1 Score: 164.851 bits (416), Expect = 3.151e-40
Identity = 76/103 (73.79%), Postives = 94/103 (91.26%), Query Frame = 2
Query:   26 DATGPKSALFVPDVPVEVLIRRQIARLLDPXLQCARFIYDELIKISHHCLVNELQRFPVLXKRMDEVIGNFLPEGLDPSQTMMGHIIEMDMDYMSPSHPSVMG 334
            +ATGP+SALFVPDVP EVL+RRQI+RLLDP LQCARFI++ELIKISH C++NELQRFPVL KRMDEVIG+FL EGL+PS+ M+G II+M+MDY++ SHP+ +G
Sbjct:  429 NATGPRSALFVPDVPFEVLVRRQISRLLDPSLQCARFIFEELIKISHRCMMNELQRFPVLRKRMDEVIGDFLREGLEPSEAMIGDIIDMEMDYINTSHPNFIG 531          

HSP 2 Score: 21.9422 bits (45), Expect = 3.151e-40
Identity = 9/22 (40.91%), Postives = 14/22 (63.64%), Query Frame = 1
Query:  346 AVEIALEQIQVPMVPWPKSRHK 411
            AVE A+ Q++   +P P +R K
Sbjct:  535 AVEAAMHQVKSSRIPHPVARPK 556          
BLAST of EY720687 vs. ExPASy Swiss-Prot
Match: DRP3B_ARATH (Dynamin-related protein 3B OS=Arabidopsis thaliana GN=DRP3B PE=1 SV=2)

HSP 1 Score: 164.081 bits (414), Expect = 1.020e-39
Identity = 76/103 (73.79%), Postives = 92/103 (89.32%), Query Frame = 2
Query:   26 DATGPKSALFVPDVPVEVLIRRQIARLLDPXLQCARFIYDELIKISHHCLVNELQRFPVLXKRMDEVIGNFLPEGLDPSQTMMGHIIEMDMDYMSPSHPSVMG 334
            +ATGP+SALFVPDVP EVL+RRQI+RLLDP LQCARFI+DEL+KISH C++ ELQRFPVL KRMDEVIGNFL EGL+PSQ M+  +IEM+MDY++ SHP+ +G
Sbjct:  414 NATGPRSALFVPDVPFEVLVRRQISRLLDPSLQCARFIFDELVKISHQCMMKELQRFPVLQKRMDEVIGNFLREGLEPSQAMIRDLIEMEMDYINTSHPNFIG 516          
BLAST of EY720687 vs. ExPASy Swiss-Prot
Match: DYNA_DICDI (Dynamin-A OS=Dictyostelium discoideum GN=dymA PE=1 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 8.405e-18
Identity = 40/103 (38.83%), Postives = 69/103 (66.99%), Query Frame = 2
Query:   26 DATGPKSALFVPDVPVEVLIRRQIARLLDPXLQCARFIYDELIKISHHCLVNELQRFPVLXKRMDEVIGNFLPEGLDPSQTMMGHIIEMDMDYMSPSHPSVMG 334
            +ATGP++ALF+P++  E+L+++Q+ RL +P  QC  ++YDEL +I       EL RF  L  R+ EV+ N L +   P++TM+ H+I+++  +++ SHP  +G
Sbjct:  396 NATGPRAALFIPEISFELLVKKQVVRLEEPSAQCVEYVYDELQRIVSQLEAKELSRFINLKARVIEVVNNLLQKHKVPTKTMIEHLIKIETAFINTSHPDFVG 498          
BLAST of EY720687 vs. ExPASy Swiss-Prot
Match: DNM1_YEAST (Dynamin-related protein DNM1 OS=Saccharomyces cerevisiae GN=DNM1 PE=1 SV=1)

HSP 1 Score: 82.8037 bits (203), Expect = 2.989e-15
Identity = 37/102 (36.27%), Postives = 65/102 (63.73%), Query Frame = 2
Query:   26 DATGPKSALFVPDVPVEVLIRRQIARLLDPXLQCARFIYDELIKISHHCLVNELQRFPVLXKRMDEVIGNFLPEGLDPSQTMMGHIIEMDMDYMSPSHPSVM 331
            ++TGP+  LFVP++  ++L++ QI  LL+P  +C   +Y+EL+KI H C   EL R+P L   + EVI   L E L P+++ +  +I++   Y++ +HP+ +
Sbjct:  433 NSTGPRPTLFVPELAFDLLVKPQIKLLLEPSQRCVELVYEELMKICHKCGSAELARYPKLKSMLIEVISELLRERLQPTRSYVESLIDIHRAYINTNHPNFL 534          
BLAST of EY720687 vs. ExPASy Swiss-Prot
Match: DNM1L_DANRE (Dynamin-1-like protein OS=Danio rerio GN=dnm1l PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 3.305e-14
Identity = 37/102 (36.27%), Postives = 65/102 (63.73%), Query Frame = 2
Query:   26 DATGPKSALFVPDVPVEVLIRRQIARLLDPXLQCARFIYDELIKISHHC---LVNELQRFPVLXKRMDEVIGNFLPEGLDPSQTMMGHIIEMDMDYMSPSHP 322
            +ATGP+ ALFVP+V  E+L++RQ+ RL +P L+C   +++E+ +I  HC      EL RFP L   + EV+ + L + L  +  M+ +++ +++ Y++  HP
Sbjct:  397 NATGPRPALFVPEVSFELLVKRQVKRLEEPSLRCVELVHEEMQRIIQHCSNYSTQELLRFPKLHDAIVEVVTSLLRKRLPVTNEMVHNLVAIELAYINTKHP 498          
BLAST of EY720687 vs. ExPASy Swiss-Prot
Match: DNM1L_RAT (Dynamin-1-like protein OS=Rattus norvegicus GN=Dnm1l PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.363e-14
Identity = 38/102 (37.25%), Postives = 64/102 (62.75%), Query Frame = 2
Query:   26 DATGPKSALFVPDVPVEVLIRRQIARLLDPXLQCARFIYDELIKISHHC---LVNELQRFPVLXKRMDEVIGNFLPEGLDPSQTMMGHIIEMDMDYMSPSHP 322
            +ATGP+ ALFVP+V  E+L++RQI RL +P L+C   +++E+ +I  HC      EL RFP L   + EV+   L + L  +  M+ +++ +++ Y++  HP
Sbjct:  411 NATGPRPALFVPEVSFELLVKRQIKRLEEPSLRCVELVHEEMQRIIQHCSNYSTQELLRFPKLHDAIVEVVTCLLRKRLPVTNEMVHNLVAIELAYINTKHP 512          
BLAST of EY720687 vs. ExPASy Swiss-Prot
Match: DNM1L_MOUSE (Dynamin-1-like protein OS=Mus musculus GN=Dnm1l PE=1 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 7.363e-14
Identity = 38/102 (37.25%), Postives = 64/102 (62.75%), Query Frame = 2
Query:   26 DATGPKSALFVPDVPVEVLIRRQIARLLDPXLQCARFIYDELIKISHHC---LVNELQRFPVLXKRMDEVIGNFLPEGLDPSQTMMGHIIEMDMDYMSPSHP 322
            +ATGP+ ALFVP+V  E+L++RQI RL +P L+C   +++E+ +I  HC      EL RFP L   + EV+   L + L  +  M+ +++ +++ Y++  HP
Sbjct:  404 NATGPRPALFVPEVSFELLVKRQIKRLEEPSLRCVELVHEEMQRIIQHCSNYSTQELLRFPKLHDAIVEVVTCLLRKRLPVTNEMVHNLVAIELAYINTKHP 505          
BLAST of EY720687 vs. ExPASy Swiss-Prot
Match: DNM1L_HUMAN (Dynamin-1-like protein OS=Homo sapiens GN=DNM1L PE=1 SV=2)

HSP 1 Score: 78.1814 bits (191), Expect = 7.363e-14
Identity = 38/102 (37.25%), Postives = 64/102 (62.75%), Query Frame = 2
Query:   26 DATGPKSALFVPDVPVEVLIRRQIARLLDPXLQCARFIYDELIKISHHC---LVNELQRFPVLXKRMDEVIGNFLPEGLDPSQTMMGHIIEMDMDYMSPSHP 322
            +ATGP+ ALFVP+V  E+L++RQI RL +P L+C   +++E+ +I  HC      EL RFP L   + EV+   L + L  +  M+ +++ +++ Y++  HP
Sbjct:  398 NATGPRPALFVPEVSFELLVKRQIKRLEEPSLRCVELVHEEMQRIIQHCSNYSTQELLRFPKLHDAIVEVVTCLLRKRLPVTNEMVHNLVAIELAYINTKHP 499          
BLAST of EY720687 vs. ExPASy Swiss-Prot
Match: DNM1L_BOVIN (Dynamin-1-like protein OS=Bos taurus GN=DNM1L PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.363e-14
Identity = 38/102 (37.25%), Postives = 64/102 (62.75%), Query Frame = 2
Query:   26 DATGPKSALFVPDVPVEVLIRRQIARLLDPXLQCARFIYDELIKISHHC---LVNELQRFPVLXKRMDEVIGNFLPEGLDPSQTMMGHIIEMDMDYMSPSHP 322
            +ATGP+ ALFVP+V  E+L++RQI RL +P L+C   +++E+ +I  HC      EL RFP L   + EV+   L + L  +  M+ +++ +++ Y++  HP
Sbjct:  411 NATGPRPALFVPEVSFELLVKRQIKRLEEPSLRCVELVHEEMQRIIQHCSNYSTQELLRFPKLHDAIVEVVTCLLRKRLPVTNEMVHNLVAIELAYINTKHP 512          
BLAST of EY720687 vs. ExPASy Swiss-Prot
Match: VPS1_SCHPO (Vacuolar protein sorting-associated protein 1 OS=Schizosaccharomyces pombe GN=vps1 PE=2 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 2.619e-11
Identity = 32/104 (30.77%), Postives = 63/104 (60.58%), Query Frame = 2
Query:   23 WDATGPKSALFVPDVPVEVLIRRQIARLLDPXLQCARFIYDELIKISHHCLVNEL-QRFPVLXKRMDEVIGNFLPEGLDPSQTMMGHIIEMDMDYMSPSHPSVM 331
            ++++GP  +LF+     EV++++QI RL DP L+C   IYDEL++I +  L   + +R+P+L     +V+  F  + + P+ T++  ++ M+  Y++  HP  +
Sbjct:  407 YNSSGPSPSLFMGTAAFEVIVKQQIKRLEDPSLKCVSLIYDELVRILNQLLQRPIFKRYPLLKDEFYKVVIGFFRKCMQPTNTLVMDMVAMEGSYINTVHPDFL 510          
The following BLAST results are available for this feature:
BLAST of EY720687 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
DRP3A_ARATH3.151e-4073.79Dynamin-related protein 3A OS=Arabidopsis thaliana... [more]
DRP3B_ARATH1.020e-3973.79Dynamin-related protein 3B OS=Arabidopsis thaliana... [more]
DYNA_DICDI8.405e-1838.83Dynamin-A OS=Dictyostelium discoideum GN=dymA PE=1... [more]
DNM1_YEAST2.989e-1536.27Dynamin-related protein DNM1 OS=Saccharomyces cere... [more]
DNM1L_DANRE3.305e-1436.27Dynamin-1-like protein OS=Danio rerio GN=dnm1l PE=... [more]
DNM1L_RAT7.363e-1437.25Dynamin-1-like protein OS=Rattus norvegicus GN=Dnm... [more]
DNM1L_MOUSE7.363e-1437.25Dynamin-1-like protein OS=Mus musculus GN=Dnm1l PE... [more]
DNM1L_HUMAN7.363e-1437.25Dynamin-1-like protein OS=Homo sapiens GN=DNM1L PE... [more]
DNM1L_BOVIN7.363e-1437.25Dynamin-1-like protein OS=Bos taurus GN=DNM1L PE=2... [more]
VPS1_SCHPO2.619e-1130.77Vacuolar protein sorting-associated protein 1 OS=S... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-013-A02-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720687 ID=EY720687; Name=EY720687; organism=Citrus sinensis; type=EST; length=912bp
CGACCACGCCTCCGCGGACGCGTGGGATGCAACTGGTCCCAAATCTGCAC
TATTTGTACCAGACGTGCCGGTCGAAGTGCTTATTCGAAGGCAAATTGCT
CGCTTGTTGGATCCTANTCTTCAGTGTGCGAGGTTCATATATGATGAGTT
AATAAAGATTAGCCATCACTGTCTTGTGAATGAACTGCAGCGCTTTCCTG
TTCTTANAAAGCGTATGGATGAGGTCATCGGGAACTTTCTGCCAGAAGGC
CTTGATCCCTCCCAGACAATGATGGGACATATCATTGAAATGGATATGGA
CTATATGAGCCCTTCCCATCCCAGTGTTATGGGGTGGAAGTATACGCTGT
GGAAATCGCACTGGAGCAGATCCAGGTCCCTATGGTTCCTTGGCCCAAAA
GCAGGCATAAGGGGTGGTGGTGTTCCCGGTAAGGCCTGAGGCGCGGAGAG
AGGTGTGGGGCGCACCCGACCCGTGCCAACCAGATCCTGAGATCTTGGCC
AGATCGGGGAGCCCGGCGAGAGGTGGGCTGGGCCGTGTCGCACCCGCTGG
CTCCCCTCTGGGGGCAGGAGGCGGGGCGGCCCCTGTCGAGGGGGACGTGC
TCCTCCGCGGCAGGACGCCGGGGGCGGCCGCCGGCCCGGTACAGGTAAGC
AGTCTTAACACACAGCCCTCACCGGGAGGCCGCCGGTGAGCGGTCGCAAG
GACAGGTGGTGGAATTGGACTAGGGGAGAACGCGAGAAGCAACGCGACCC
GAGTCCCGGCGGGGGTGGCGGCTCGTCGGGGGGGCTCTCAAGGTCTCGGC
GACGCGCCGAAGGATTGGTCGGAGAGGGGGGCGCTGAACTAGTTCGTGCT
TCCCGGGGCCGTGGGCTCGACCAGGCGCTGCTCACCTAGATTTTGTTACC
TCCTACGCGGGG
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