EY720674

Overview
NameEY720674
Unique NameEY720674
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length663
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720674 vs. ExPASy Swiss-Prot
Match: GCSP_SOLTU (Glycine dehydrogenase [decarboxylating], mitochondrial OS=Solanum tuberosum GN=GDCSP PE=2 SV=1)

HSP 1 Score: 311.997 bits (798), Expect = 1.772e-84
Identity = 153/221 (69.23%), Postives = 174/221 (78.73%), Query Frame = 1
Query:    1 LPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPAMSWPVPGTLMIEPTESESXGIVGQVL*CSHLHQRTN*PIDNGKGHIHKNVLKGAPHPPSLVSGKAWN*PYSPEYRNYAGSWIRFWKFLAANGSLDNLFWFRHL 663
            LPSHPVV TGGIP+P+KS+PLG I+AAPWGSALILPISYTYIAMMGSKGLT+ASKIAIL+ANYMAKRLEKHYP+LFRGVNGT AHEFI+DLRG KNTAGIEPEDVAKRL+DYGFHGP MSWPVPGTLMIEPTESES   + +        +     I+ G   I+ NVLKGAPHPPS++   AW  PYS EY  Y   W+R  KF    G +DN++  R+L
Sbjct:  797 LPSHPVVPTGGIPSPDKSEPLGAISAAPWGSALILPISYTYIAMMGSKGLTDASKIAILSANYMAKRLEKHYPVLFRGVNGTCAHEFIIDLRGFKNTAGIEPEDVAKRLIDYGFHGPTMSWPVPGTLMIEPTESESKAELDRFCDALISIREEIAQIEKGNVDINNNVLKGAPHPPSMLMADAWTKPYSREYAAYPAPWLRSAKFWPTTGRVDNVYGDRNL 1017          
BLAST of EY720674 vs. ExPASy Swiss-Prot
Match: GCSP_PEA (Glycine dehydrogenase [decarboxylating], mitochondrial OS=Pisum sativum GN=GDCSP PE=1 SV=1)

HSP 1 Score: 311.997 bits (798), Expect = 1.772e-84
Identity = 152/221 (68.78%), Postives = 174/221 (78.73%), Query Frame = 1
Query:    1 LPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPAMSWPVPGTLMIEPTESESXGIVGQVL*CSHLHQRTN*PIDNGKGHIHKNVLKGAPHPPSLVSGKAWN*PYSPEYRNYAGSWIRFWKFLAANGSLDNLFWFRHL 663
            LPSHPVV TGGIPAPE  QPLG+I+AAPWGSALILPISYTYIAMMGS+GLT+ASKIAILNANYMAKRLE +YP+LFRGVNGTVAHEFI+DLRG KNTAGIEPEDVAKRLMDYGFHGP MSWPV GTLMIEPTESES   + +        ++    ++ G   +H NVLKGAPHPPSL+   AW  PYS EY  +  +W+R  KF    G +DN++  R+L
Sbjct:  818 LPSHPVVPTGGIPAPENPQPLGSISAAPWGSALILPISYTYIAMMGSQGLTDASKIAILNANYMAKRLESYYPVLFRGVNGTVAHEFIIDLRGFKNTAGIEPEDVAKRLMDYGFHGPTMSWPVAGTLMIEPTESESKAELDRFCDALISIRKEIAEVEKGNADVHNNVLKGAPHPPSLLMADAWTKPYSREYAAFPAAWLRGAKFWPTTGRVDNVYGDRNL 1038          
BLAST of EY720674 vs. ExPASy Swiss-Prot
Match: GCSP2_ARATH (Glycine dehydrogenase [decarboxylating] 2, mitochondrial OS=Arabidopsis thaliana GN=At4g33010 PE=1 SV=2)

HSP 1 Score: 309.686 bits (792), Expect = 8.794e-84
Identity = 152/221 (68.78%), Postives = 169/221 (76.47%), Query Frame = 1
Query:    1 LPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPAMSWPVPGTLMIEPTESESXGIVGQVL*CSHLHQRTN*PIDNGKGHIHKNVLKGAPHPPSLVSGKAWN*PYSPEYRNYAGSWIRFWKFLAANGSLDNLFWFRHL 663
            LPSHPV+ TGGIP PEK+ PLG I+AAPWGSALILPISYTYIAMMGS GLT+ASKIAILNANYMAKRLEKHYP+LFRGVNGTVAHEFI+DLRG KNTAGIEPEDVAKRLMDYGFHGP MSWPVPGTLMIEPTESES   + +        +     I+ G   +  NVLKGAPHPPSL+    W  PYS EY  +   W+R  KF    G +DN++  R L
Sbjct:  800 LPSHPVIPTGGIPQPEKTAPLGAISAAPWGSALILPISYTYIAMMGSGGLTDASKIAILNANYMAKRLEKHYPVLFRGVNGTVAHEFIIDLRGFKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKAELDRFCDALISIREEIAQIEKGNADVQNNVLKGAPHPPSLLMADTWKKPYSREYAAFPAPWLRSSKFWPTTGRVDNVYGDRKL 1020          
BLAST of EY720674 vs. ExPASy Swiss-Prot
Match: GCSP1_ARATH (Glycine dehydrogenase [decarboxylating] 1, mitochondrial OS=Arabidopsis thaliana GN=GDCSP PE=1 SV=1)

HSP 1 Score: 307.375 bits (786), Expect = 4.365e-83
Identity = 151/221 (68.33%), Postives = 170/221 (76.92%), Query Frame = 1
Query:    1 LPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPAMSWPVPGTLMIEPTESESXGIVGQVL*CSHLHQRTN*PIDNGKGHIHKNVLKGAPHPPSLVSGKAWN*PYSPEYRNYAGSWIRFWKFLAANGSLDNLFWFRHL 663
            LPSHPV+ TGGIP PE++ PLGTI+AAPWGSALILPISYTYIAMMGS GLT+ASKIAILNANYMAKRLE HYP+LFRGVNGTVAHEFI+DLRG KNTAGIEPEDVAKRLMDYGFHGP MSWPVPGTLMIEPTESES   + +        +     I+ G    + NVLKGAPHPPSL+    W  PYS EY  +   W+R  KF    G +DN++  R+L
Sbjct:  806 LPSHPVIPTGGIPEPEQTSPLGTISAAPWGSALILPISYTYIAMMGSGGLTDASKIAILNANYMAKRLESHYPVLFRGVNGTVAHEFIIDLRGFKNTAGIEPEDVAKRLMDYGFHGPTMSWPVPGTLMIEPTESESKAELDRFCDALISIREEISQIEKGNADPNNNVLKGAPHPPSLLMADTWKKPYSREYAAFPAPWLRSSKFWPTTGRVDNVYGDRNL 1026          
BLAST of EY720674 vs. ExPASy Swiss-Prot
Match: GCSPA_FLAPR (Glycine dehydrogenase [decarboxylating] A, mitochondrial OS=Flaveria pringlei GN=GDCSPA PE=2 SV=1)

HSP 1 Score: 306.22 bits (783), Expect = 9.723e-83
Identity = 153/221 (69.23%), Postives = 172/221 (77.83%), Query Frame = 1
Query:    1 LPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPAMSWPVPGTLMIEPTESESXGIVGQVL*CSHLHQRTN*PIDNGKGHIHKNVLKGAPHPPSLVSGKAWN*PYSPEYRNYAGSWIRFWKFLAANGSLDNLFWFRHL 663
            LPSHPVV+TGGIPAPE+SQPLGTIAAAPWGSALILPISYTYIAMMGS+G+T ASKIAILNANYMAKRLE HYPILFRGVNGTVAHEFIVDLR LK TAGIEPEDVAKRL+DYGFHGP MSWPVPGTLMIEPTESES   + +        ++    I+ G   ++ NV+KGAPHPP L+    W  PYS EY  Y   W+R  KF      +DN++  R+L
Sbjct:  799 LPSHPVVATGGIPAPEQSQPLGTIAAAPWGSALILPISYTYIAMMGSQGITNASKIAILNANYMAKRLENHYPILFRGVNGTVAHEFIVDLRPLKTTAGIEPEDVAKRLIDYGFHGPTMSWPVPGTLMIEPTESESKAELDRFCDALISIRQEIAEIEKGNVDLNNNVIKGAPHPPQLLMADKWTKPYSREYAAYPAPWLRAAKFWPTTCRVDNVYGDRNL 1019          
BLAST of EY720674 vs. ExPASy Swiss-Prot
Match: GCSP_FLAAN (Glycine dehydrogenase [decarboxylating], mitochondrial OS=Flaveria anomala GN=GDCSP PE=3 SV=1)

HSP 1 Score: 304.679 bits (779), Expect = 2.829e-82
Identity = 153/221 (69.23%), Postives = 170/221 (76.92%), Query Frame = 1
Query:    1 LPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPAMSWPVPGTLMIEPTESESXGIVGQVL*CSHLHQRTN*PIDNGKGHIHKNVLKGAPHPPSLVSGKAWN*PYSPEYRNYAGSWIRFWKFLAANGSLDNLFWFRHL 663
            LPSHPVV TGGIPAPE+SQPLGTIAAAPWGSALILPISYTYIAMMGS+G+T ASKIAILNANYMAKRLE HYPILFRGVNGTVAHEFIVDLR LK TAGIEPEDVAKRL+DYGFHGP MSWPVPGTLMIEPTESES   + +        ++    I+ G    + NV+KGAPHPP L+    W  PYS EY  Y   W+R  KF      +DN++  R+L
Sbjct:  796 LPSHPVVPTGGIPAPEESQPLGTIAAAPWGSALILPISYTYIAMMGSQGITNASKIAILNANYMAKRLENHYPILFRGVNGTVAHEFIVDLRPLKTTAGIEPEDVAKRLIDYGFHGPTMSWPVPGTLMIEPTESESKAELDRFCDALISIRQEIAEIEKGNVDFNNNVIKGAPHPPQLLMADKWTKPYSREYAAYPAPWLRAAKFWPTTCRVDNVYGDRNL 1016          
BLAST of EY720674 vs. ExPASy Swiss-Prot
Match: GCSPB_FLAPR (Glycine dehydrogenase [decarboxylating] B, mitochondrial OS=Flaveria pringlei GN=GDCSPB PE=3 SV=1)

HSP 1 Score: 304.679 bits (779), Expect = 2.829e-82
Identity = 153/221 (69.23%), Postives = 170/221 (76.92%), Query Frame = 1
Query:    1 LPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPAMSWPVPGTLMIEPTESESXGIVGQVL*CSHLHQRTN*PIDNGKGHIHKNVLKGAPHPPSLVSGKAWN*PYSPEYRNYAGSWIRFWKFLAANGSLDNLFWFRHL 663
            LPSHPVV TGGIPAPE+SQPLGTIAAAPWGSALILPISYTYIAMMGS+G+T ASKIAILNANYMAKRLE HYPILFRGVNGTVAHEFIVDLR LK TAGIEPEDVAKRL+DYGFHGP MSWPVPGTLMIEPTESES   + +        ++    I+ G    + NV+KGAPHPP L+    W  PYS EY  Y   W+R  KF      +DN++  R+L
Sbjct:  796 LPSHPVVPTGGIPAPEQSQPLGTIAAAPWGSALILPISYTYIAMMGSQGITNASKIAILNANYMAKRLENHYPILFRGVNGTVAHEFIVDLRPLKTTAGIEPEDVAKRLIDYGFHGPTMSWPVPGTLMIEPTESESKAELDRFCDALISIRQEIAEIEKGNVDFNNNVIKGAPHPPQLLMADKWTKPYSREYAAYPAPWLRAAKFWPTTCRVDNVYGDRNL 1016          
BLAST of EY720674 vs. ExPASy Swiss-Prot
Match: GCSP_FLATR (Glycine dehydrogenase [decarboxylating], mitochondrial OS=Flaveria trinervia GN=GDCSPA PE=3 SV=1)

HSP 1 Score: 304.294 bits (778), Expect = 3.695e-82
Identity = 153/221 (69.23%), Postives = 170/221 (76.92%), Query Frame = 1
Query:    1 LPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPAMSWPVPGTLMIEPTESESXGIVGQVL*CSHLHQRTN*PIDNGKGHIHKNVLKGAPHPPSLVSGKAWN*PYSPEYRNYAGSWIRFWKFLAANGSLDNLFWFRHL 663
            LPSHPVV TGGIPAPE+SQPLGTIAAAPWGSALILPISYTYIAMMGS+G+T ASKIAILNANYMAKRLE HYPILFRGVNGTVAHEFIVDLR LK TAGIEPEDVAKRL+DYGFHGP MSWPVPGTLMIEPTESES   + +        ++    I+ G    + NV+KGAPHPP L+    W  PYS EY  Y   W+R  KF      +DN++  R+L
Sbjct:  796 LPSHPVVPTGGIPAPEQSQPLGTIAAAPWGSALILPISYTYIAMMGSQGITNASKIAILNANYMAKRLENHYPILFRGVNGTVAHEFIVDLRPLKTTAGIEPEDVAKRLIDYGFHGPTMSWPVPGTLMIEPTESESKAELDRFCDALISIRQEIAEIEKGTVDFNNNVIKGAPHPPQLLMADKWTKPYSREYAAYPAPWLRAAKFWPTTCRVDNVYGDRNL 1016          
BLAST of EY720674 vs. ExPASy Swiss-Prot
Match: GCSP_ANAVT (Glycine dehydrogenase [decarboxylating] OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=gcvP PE=3 SV=1)

HSP 1 Score: 216.853 bits (551), Expect = 7.758e-56
Identity = 116/221 (52.49%), Postives = 150/221 (67.87%), Query Frame = 1
Query:    1 LPSHPVVSTGGIPAPEKSQPLGTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPAMSWPVPGTLMIEPTESESXGIVGQVL*CSHLHQRTN*PIDNGKGHIHKNVLKGAPHP-PSLVSGKAWN*PYSPEYRNYAGSWIRFWKFLAANGSLDNLFWFRH 660
            LP HPV+ +G  P     Q +G +AAAPWGSA IL IS+ YIAMMG+ GLT+A+K+AILNANY+AKRLE +YP+L++G NG VAHE I+DLR LK +A IE +D+AKRL+DYGFH P +SWPV GT+M+EPTESES   + +        ++    I+ GK   H N+LK APH   SL+ G+ W  PYS E   Y  SW R +KF  + G +D  F  R+
Sbjct:  748 LPGHPVLGSGKNP-----QNIGAVAAAPWGSASILVISWMYIAMMGADGLTQATKVAILNANYIAKRLETYYPVLYKGQNGLVAHECILDLRALKKSANIEIDDIAKRLIDYGFHAPTVSWPVTGTIMVEPTESESQAELDRFCDALIAIRQEIAAIEAGKMDTHNNLLKNAPHTIESLIVGE-WLHPYSREQAAYPVSWTREYKFWPSVGRIDAAFGDRN 962          
BLAST of EY720674 vs. ExPASy Swiss-Prot
Match: GCSP_THEEB (Glycine dehydrogenase [decarboxylating] OS=Thermosynechococcus elongatus (strain BP-1) GN=gcvP PE=3 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.120e-54
Identity = 107/200 (53.50%), Postives = 135/200 (67.50%), Query Frame = 1
Query:   64 GTIAAAPWGSALILPISYTYIAMMGSKGLTEASKIAILNANYMAKRLEKHYPILFRGVNGTVAHEFIVDLRGLKNTAGIEPEDVAKRLMDYGFHGPAMSWPVPGTLMIEPTESESXGIVGQVL*CSHLHQRTN*PIDNGKGHIHKNVLKGAPHPPSLVSGKAWN*PYSPEYRNYAGSWIRFWKFLAANGSLDNLFWFRHL 663
            G + AAPWGSA ILPIS+ YI +MG  GLT A+ IAILNANY+AKRLE +YP+L++G +G VAHE I+DLR LK +AGIE ED+AKRLMDYGFH P +SWPVPGTLMIEPTESE+   + +        +     I+ G     +N LK APHP  +++ + W  PYS E   Y   W+R +KF  A   +DN +  RHL
Sbjct:  745 GPVTAAPWGSASILPISWMYITLMGGVGLTRATAIAILNANYIAKRLEPYYPVLYKGAHGLVAHECILDLRPLKKSAGIEVEDIAKRLMDYGFHAPTVSWPVPGTLMIEPTESETKAELDRFCEAMIAIRSEIAEIEAGVSDRQQNPLKNAPHPALMLATEPWPYPYSREVAAYPAPWLREYKFWPAVARIDNAYGDRHL 944          
The following BLAST results are available for this feature:
BLAST of EY720674 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 354
Match NameE-valueIdentityDescription
GCSP_SOLTU1.772e-8469.23Glycine dehydrogenase [decarboxylating], mitochond... [more]
GCSP_PEA1.772e-8468.78Glycine dehydrogenase [decarboxylating], mitochond... [more]
GCSP2_ARATH8.794e-8468.78Glycine dehydrogenase [decarboxylating] 2, mitocho... [more]
GCSP1_ARATH4.365e-8368.33Glycine dehydrogenase [decarboxylating] 1, mitocho... [more]
GCSPA_FLAPR9.723e-8369.23Glycine dehydrogenase [decarboxylating] A, mitocho... [more]
GCSP_FLAAN2.829e-8269.23Glycine dehydrogenase [decarboxylating], mitochond... [more]
GCSPB_FLAPR2.829e-8269.23Glycine dehydrogenase [decarboxylating] B, mitocho... [more]
GCSP_FLATR3.695e-8269.23Glycine dehydrogenase [decarboxylating], mitochond... [more]
GCSP_ANAVT7.758e-5652.49Glycine dehydrogenase [decarboxylating] OS=Anabaen... [more]
GCSP_THEEB1.120e-5453.50Glycine dehydrogenase [decarboxylating] OS=Thermos... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-012-G11-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720674 ID=EY720674; Name=EY720674; organism=Citrus sinensis; type=EST; length=663bp
CTGCCTTCACATCCTGTGGTATCCACAGGTGGTATTCCTGCCCCTGAAAA
GTCTCAACCCCTGGGCACAATTGCAGCTGCACCCTGGGGCTCTGCACTTA
TCCTGCCAATATCATATACGTACATAGCTATGATGGGTTCTAAAGGACTC
ACTGAGGCTTCAAAGATAGCTATTCTGAATGCAAACTACATGGCAAAACG
TTTGGAGAAACATTACCCCATCCTTTTCCGTGGTGTCAATGGAACAGTTG
CTCATGAATTCATTGTGGACTTAAGAGGCTTGAAAAATACTGCCGGGATA
GAGCCCGAAGATGTTGCCAAACGTCTTATGGATTATGGATTCCATGGACC
AGCAATGTCATGGCCTGTTCCAGGCACACTTATGATTGAACCAACTGAAA
GTGAAAGCCANGGAATAGTTGGACAGGTATTGTGATGCTCTCATCTCCAT
CAAAGAACAAATTGACCCATTGACAATGGGAAAGGACATATCCACAAGAA
TGTCCTGAAGGGGGCGCCTCATCCACCATCTTTGGTCAGTGGGAAAGCTT
GGAACTAACCATACTCTCCAGAATATCGCAACTATGCTGGTTCGTGGATC
CGGTTTTGGAAATTCTTGGCTGCTAACGGGAGCCTTGACAATTTGTTTTG
GTTCCGCCACCTC
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