EY720665

Overview
NameEY720665
Unique NameEY720665
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length841
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720665 vs. ExPASy Swiss-Prot
Match: CCR4E_ARATH (Carbon catabolite repressor protein 4 homolog 5 OS=Arabidopsis thaliana GN=CCR4-5 PE=2 SV=2)

HSP 1 Score: 103.99 bits (258), Expect = 1.316e-42
Identity = 46/100 (46.00%), Postives = 68/100 (68.00%), Query Frame = 3
Query:   12 MKWNRRKRLICQELIGLNPDIICMQEVDRYFDILNVMEKTGYAGCYKRRTGDNVDGCAMFWKADKFRLLEQTSIEFKEFGLRENVAQLSAFEADAQHKIK 311
            ++W+RRK LIC+E+   N  I+C+QEVDR+ D+  +++  G+ G +K RTG+  DGCA+FWK + F LL+   IEF +FG+R NVAQL   E + +   K
Sbjct:  128 LEWSRRKHLICKEISRYNASILCLQEVDRFDDLDVLLKNRGFRGVHKSRTGEASDGCAIFWKENLFELLDHQHIEFDKFGMRNNVAQLCVLEMNCEEDPK 227          

HSP 2 Score: 90.8929 bits (224), Expect = 1.316e-42
Identity = 38/73 (52.05%), Postives = 59/73 (80.82%), Query Frame = 1
Query:  289 QMRNTKSRRVLVGNIHVLYNPNRGEVKLGQICFLSSRAQIVAEKWGNIPVVLAGDFNITPQSAIYKFLSSSEV 507
            ++R++  RR++VGNIHVL+NP RG++KLGQ+     +A  ++++WGNIPV +AGD N TPQSAIY F++S+++
Sbjct:  231 RVRSSDPRRLVVGNIHVLFNPKRGDIKLGQVRLFLEKAYKLSQEWGNIPVAIAGDLNSTPQSAIYDFIASADL 303          
BLAST of EY720665 vs. ExPASy Swiss-Prot
Match: CCR4C_ARATH (Carbon catabolite repressor protein 4 homolog 3 OS=Arabidopsis thaliana GN=CCR4-3 PE=2 SV=2)

HSP 1 Score: 150.984 bits (380), Expect = 7.872e-36
Identity = 68/101 (67.33%), Postives = 84/101 (83.17%), Query Frame = 3
Query:   12 MKWNRRKRLICQELIGLNPDIICMQEVDRYFDILNVMEKTGYAGCYKRRTGDNVDGCAMFWKADKFRLLEQTSIEFKEFGLRENVAQLSAFEADAQHKIKK 314
            +KW  RKRLIC+ELI LNPDII MQEVD+YFD+ ++MEK GYAG YKRRTGDNVDGCAMFWKAD+F +LE+ +IEF +FG+R+NVAQL+  E    +K +K
Sbjct:  137 LKWGYRKRLICEELIRLNPDIISMQEVDKYFDLFSMMEKAGYAGSYKRRTGDNVDGCAMFWKADRFGVLERENIEFSQFGMRDNVAQLAVLELRKSNKSRK 237          

HSP 2 Score: 103.219 bits (256), Expect = 1.874e-21
Identity = 48/106 (45.28%), Postives = 71/106 (66.98%), Query Frame = 1
Query:  190 FGKLISFGY*SKQALNLKSLAFVKMWHNFPLLRQMRNTKSRRVLVGNIHVLYNPNRGEVKLGQICFLSSRAQIVAEKWGNIPVVLAGDFNITPQSAIYKFLSSSEV 507
            F K   FG   ++ +               +L   ++ KSR++L+GNIHVLYNPN+G+VKLGQ+  L S+A ++++KWG+IP+VL GDFN TP+S +Y FL+SSE+
Sbjct:  196 FWKADRFGVLERENIEFSQFGMRDNVAQLAVLELRKSNKSRKILLGNIHVLYNPNQGDVKLGQVRSLCSKAHLLSKKWGDIPIVLCGDFNSTPKSPLYNFLASSEL 301          
BLAST of EY720665 vs. ExPASy Swiss-Prot
Match: CCR4F_ARATH (Carbon catabolite repressor protein 4 homolog 6 OS=Arabidopsis thaliana GN=CCR4-6 PE=2 SV=2)

HSP 1 Score: 92.4337 bits (228), Expect = 8.477e-35
Identity = 40/92 (43.48%), Postives = 64/92 (69.57%), Query Frame = 3
Query:   12 MKWNRRKRLICQELIGLNPDIICMQEVDRYFDILNVMEKTGYAGCYKRRTGDNVDGCAMFWKADKFRLLEQTSIEFKEFGLRENVAQLSAFE 287
            + W  RK  +  EL   + DI+C+QEVD++ D+   M+  GY+  +K RTG+ VDGCA+FW++++F+L+ + SI+F + GLR+NVAQ+   E
Sbjct:  212 LSWGWRKSKLVFELSLWSADIMCLQEVDKFQDLEEEMKHRGYSAIWKMRTGNAVDGCAIFWRSNRFKLVHEESIQFNQLGLRDNVAQICVLE 303          

HSP 2 Score: 76.2554 bits (186), Expect = 8.477e-35
Identity = 33/67 (49.25%), Postives = 48/67 (71.64%), Query Frame = 1
Query:  307 SRRVLVGNIHVLYNPNRGEVKLGQICFLSSRAQIVAEKWGNIPVVLAGDFNITPQSAIYKFLSSSEV 507
            S RV++ NIHVL+NP RG+ KLGQ+  L  +A  V++ W + P+VL GDFN TP+S +Y F+S  ++
Sbjct:  324 SHRVVICNIHVLFNPKRGDFKLGQVRTLLDKAHAVSKLWDDAPIVLCGDFNCTPKSPLYNFISDRKL 390          
BLAST of EY720665 vs. ExPASy Swiss-Prot
Match: ANGE1_RAT (Protein angel homolog 1 OS=Rattus norvegicus GN=Angel1 PE=2 SV=2)

HSP 1 Score: 62.003 bits (149), Expect = 6.512e-20
Identity = 37/92 (40.22%), Postives = 53/92 (57.61%), Query Frame = 3
Query:   12 MKWNRRKRLICQELIGLNPDIICMQEV--DRYFDILNV-MEKTGYAGCYKRRTGDNVDGCAMFWKADKFRLLEQTSIEFKEFGL----RENV 266
            + WN R   + QE    +PDI+C+QEV  D Y++ L   +   G+   YKRRTG   DGCA+ +K  +FRLL  + +E+   GL    R+NV
Sbjct:  270 LNWNYRFANLMQEFQHWDPDILCLQEVQEDHYWEQLEPSLRMMGFTCFYKRRTGCKTDGCAVCYKPTRFRLLCASPVEYFRPGLELLNRDNV 361          

HSP 2 Score: 56.6102 bits (135), Expect = 6.512e-20
Identity = 27/65 (41.54%), Postives = 37/65 (56.92%), Query Frame = 1
Query:  322 VGNIHVLYNPNRGEVKLGQICFLSSRAQIVA--EKWGNIPVVLAGDFNITPQSAIYKFLSSSEVR 510
            V N HVLYNP RG+VKL Q+  L +    VA      + P++L GD N  P S +Y F+   E++
Sbjct:  385 VANTHVLYNPRRGDVKLAQMAILLAEVDKVARLSDGSHCPIILCGDLNSVPDSPLYNFIRDGELQ 449          
BLAST of EY720665 vs. ExPASy Swiss-Prot
Match: ANGE1_MOUSE (Protein angel homolog 1 OS=Mus musculus GN=Angel1 PE=2 SV=2)

HSP 1 Score: 62.003 bits (149), Expect = 6.512e-20
Identity = 37/92 (40.22%), Postives = 53/92 (57.61%), Query Frame = 3
Query:   12 MKWNRRKRLICQELIGLNPDIICMQEV--DRYFDILNV-MEKTGYAGCYKRRTGDNVDGCAMFWKADKFRLLEQTSIEFKEFGL----RENV 266
            + WN R   + QE    +PDI+C+QEV  D Y++ L   +   G+   YKRRTG   DGCA+ +K  +FRLL  + +E+   GL    R+NV
Sbjct:  270 LNWNYRFANLMQEFQHWDPDILCLQEVQEDHYWEQLEPSLRMMGFTCFYKRRTGCKTDGCAVCYKPTRFRLLCASPVEYFRPGLELLNRDNV 361          

HSP 2 Score: 56.6102 bits (135), Expect = 6.512e-20
Identity = 27/65 (41.54%), Postives = 37/65 (56.92%), Query Frame = 1
Query:  322 VGNIHVLYNPNRGEVKLGQICFLSSRAQIVA--EKWGNIPVVLAGDFNITPQSAIYKFLSSSEVR 510
            V N HVLYNP RG+VKL Q+  L +    VA      + P++L GD N  P S +Y F+   E++
Sbjct:  385 VANTHVLYNPRRGDVKLAQMAILLAEVDKVARLSDGSHCPIILCGDLNSVPDSPLYNFIRDGELQ 449          
BLAST of EY720665 vs. ExPASy Swiss-Prot
Match: ANGE1_HUMAN (Protein angel homolog 1 OS=Homo sapiens GN=ANGEL1 PE=1 SV=1)

HSP 1 Score: 61.2326 bits (147), Expect = 1.432e-19
Identity = 37/92 (40.22%), Postives = 53/92 (57.61%), Query Frame = 3
Query:   12 MKWNRRKRLICQELIGLNPDIICMQEV--DRYFDILNV-MEKTGYAGCYKRRTGDNVDGCAMFWKADKFRLLEQTSIEFKEFGL----RENV 266
            + WN R   + QE    +PDI+C+QEV  D Y++ L   +   G+   YKRRTG   DGCA+ +K  +FRLL  + +E+   GL    R+NV
Sbjct:  273 LNWNYRFVNLMQEFQHWDPDILCLQEVQEDHYWEQLEPSLRMMGFTCFYKRRTGCKTDGCAVCYKPTRFRLLCASPVEYFRPGLELLNRDNV 364          

HSP 2 Score: 56.225 bits (134), Expect = 1.432e-19
Identity = 26/65 (40.00%), Postives = 37/65 (56.92%), Query Frame = 1
Query:  322 VGNIHVLYNPNRGEVKLGQICFLSSRAQIVA--EKWGNIPVVLAGDFNITPQSAIYKFLSSSEVR 510
            V N H+LYNP RG+VKL Q+  L +    VA      + P++L GD N  P S +Y F+   E++
Sbjct:  388 VANTHILYNPRRGDVKLAQMAILLAEVDKVARLSDGSHCPIILCGDLNSVPDSPLYNFIRDGELQ 452          
BLAST of EY720665 vs. ExPASy Swiss-Prot
Match: ANGE2_BOVIN (Protein angel homolog 2 OS=Bos taurus GN=ANGEL2 PE=2 SV=1)

HSP 1 Score: 56.225 bits (134), Expect = 4.638e-17
Identity = 29/75 (38.67%), Postives = 43/75 (57.33%), Query Frame = 1
Query:  307 SRRVLVGNIHVLYNPNRGEVKLGQICFLSSRAQIVA-EKWGNI-PVVLAGDFNITPQSAIYKFLSSSEVRCVNLS 525
            S  + V N H+LYNP RG++KL Q+  L +    VA +K G   P+V+ GDFN  P S +Y F+   ++    L+
Sbjct:  301 SPAICVANTHLLYNPRRGDIKLTQLAMLLAEISSVAHQKDGRFCPIVMCGDFNSVPGSPLYSFIKEGKLNYEGLA 375          

HSP 2 Score: 52.7582 bits (125), Expect = 4.638e-17
Identity = 31/79 (39.24%), Postives = 44/79 (55.70%), Query Frame = 3
Query:   12 MKWNRRKRLICQELIGLNPDIICMQEV--DRY-FDILNVMEKTGYAGCYKRRTGDNVDGCAMFWKADKFRLLEQTSIEF 239
            + W+ R   I +E+   + D++C+QEV  D Y  +I   +E  GY   YK RTG   DGCA+ +K  KF LL    +EF
Sbjct:  195 LHWSFRFPNILKEIKHFDADVLCLQEVQEDHYGTEIRPSLESLGYHCEYKMRTGRKPDGCAICFKHSKFSLLSVNPVEF 273          
BLAST of EY720665 vs. ExPASy Swiss-Prot
Match: ANGE2_HUMAN (Protein angel homolog 2 OS=Homo sapiens GN=ANGEL2 PE=2 SV=1)

HSP 1 Score: 55.8398 bits (133), Expect = 6.029e-17
Identity = 27/66 (40.91%), Postives = 41/66 (62.12%), Query Frame = 1
Query:  316 VLVGNIHVLYNPNRGEVKLGQICFLSSRAQIVA-EKWGNI-PVVLAGDFNITPQSAIYKFLSSSEV 507
            + V N H+LYNP RG++KL Q+  L +    VA +K G+  P+V+ GDFN  P S +Y F+   ++
Sbjct:  304 ICVANTHLLYNPRRGDIKLTQLAMLLAEISSVAHQKDGSFCPIVMCGDFNSVPGSPLYSFIKEGKL 369          

HSP 2 Score: 52.7582 bits (125), Expect = 6.029e-17
Identity = 31/79 (39.24%), Postives = 44/79 (55.70%), Query Frame = 3
Query:   12 MKWNRRKRLICQELIGLNPDIICMQEV--DRY-FDILNVMEKTGYAGCYKRRTGDNVDGCAMFWKADKFRLLEQTSIEF 239
            + W+ R   I +E+   + D++C+QEV  D Y  +I   +E  GY   YK RTG   DGCA+ +K  KF LL    +EF
Sbjct:  195 LHWSFRFPNILKEIKHFDADVLCLQEVQEDHYGAEIRPSLESLGYHCEYKMRTGRKPDGCAICFKHSKFSLLSVNPVEF 273          
BLAST of EY720665 vs. ExPASy Swiss-Prot
Match: ANGE2_MOUSE (Protein angel homolog 2 OS=Mus musculus GN=Angel2 PE=2 SV=1)

HSP 1 Score: 55.0694 bits (131), Expect = 4.912e-16
Identity = 27/75 (36.00%), Postives = 43/75 (57.33%), Query Frame = 1
Query:  307 SRRVLVGNIHVLYNPNRGEVKLGQICFLSSR-AQIVAEKWG-NIPVVLAGDFNITPQSAIYKFLSSSEVRCVNLS 525
            S  + + N H+LYNP RG++KL Q+  L +  A +   K G + P+V+ GDFN  P S +Y F+   ++    L+
Sbjct:  301 SPSICIANTHLLYNPRRGDIKLTQLAMLLAEIANVTHRKDGSSCPIVMCGDFNSVPGSPLYSFIKEGKLNYEGLA 375          

HSP 2 Score: 50.447 bits (119), Expect = 4.912e-16
Identity = 29/79 (36.71%), Postives = 44/79 (55.70%), Query Frame = 3
Query:   12 MKWNRRKRLICQELIGLNPDIICMQEV--DRY-FDILNVMEKTGYAGCYKRRTGDNVDGCAMFWKADKFRLLEQTSIEF 239
            + W+ R   I +E+   + D++C+QEV  D Y  +I   +E  GY   YK +TG   DGCA+ +K  +F LL    +EF
Sbjct:  195 LHWSFRFPNILKEIKHFDADVLCLQEVQEDHYGTEIRPSLESLGYHCEYKMKTGRKPDGCAICFKHSRFSLLSVNPVEF 273          
BLAST of EY720665 vs. ExPASy Swiss-Prot
Match: ANGE2_DANRE (Protein angel homolog 2 OS=Danio rerio GN=angel2 PE=2 SV=1)

HSP 1 Score: 53.5286 bits (127), Expect = 8.288e-16
Identity = 25/61 (40.98%), Postives = 38/61 (62.30%), Query Frame = 1
Query:  316 VLVGNIHVLYNPNRGEVKLGQICFLSSRAQIVAEKWGN--IPVVLAGDFNITPQSAIYKFL 492
            + V N H+LYNP RG++KL Q+  L +    V++   +   PV+L GDFN  P S +Y+F+
Sbjct:  336 ICVANTHLLYNPRRGDIKLAQLAMLLAEISRVSQLPDSSVCPVLLCGDFNSVPWSPLYRFI 396          

HSP 2 Score: 51.2174 bits (121), Expect = 8.288e-16
Identity = 34/92 (36.96%), Postives = 50/92 (54.35%), Query Frame = 3
Query:   12 MKWNRRKRLICQELIGLNPDIICMQEV--DRYFD-ILNVMEKTGYAGCYKRRTGDNVDGCAMFWKADKFRLLEQTSIEFKEFGL----RENV 266
            + W  R   I +EL   + DI+C+QEV  D Y   I   +E  GY   +KRRTG   DGCA+ +K ++F L+    +E+   G+    R+NV
Sbjct:  227 LDWRNRFPNIIKELEQYSADIMCLQEVQEDHYKQQIKPSLESLGYHCEFKRRTGLKPDGCAVIFKRERFSLVSCHPVEYFRRGVPLMDRDNV 318          
The following BLAST results are available for this feature:
BLAST of EY720665 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 30
Match NameE-valueIdentityDescription
CCR4E_ARATH1.316e-4246.00Carbon catabolite repressor protein 4 homolog 5 OS... [more]
CCR4C_ARATH7.872e-3667.33Carbon catabolite repressor protein 4 homolog 3 OS... [more]
CCR4F_ARATH8.477e-3543.48Carbon catabolite repressor protein 4 homolog 6 OS... [more]
ANGE1_RAT6.512e-2040.22Protein angel homolog 1 OS=Rattus norvegicus GN=An... [more]
ANGE1_MOUSE6.512e-2040.22Protein angel homolog 1 OS=Mus musculus GN=Angel1 ... [more]
ANGE1_HUMAN1.432e-1940.22Protein angel homolog 1 OS=Homo sapiens GN=ANGEL1 ... [more]
ANGE2_BOVIN4.638e-1738.67Protein angel homolog 2 OS=Bos taurus GN=ANGEL2 PE... [more]
ANGE2_HUMAN6.029e-1740.91Protein angel homolog 2 OS=Homo sapiens GN=ANGEL2 ... [more]
ANGE2_MOUSE4.912e-1636.00Protein angel homolog 2 OS=Mus musculus GN=Angel2 ... [more]
ANGE2_DANRE8.288e-1640.98Protein angel homolog 2 OS=Danio rerio GN=angel2 P... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-703-012-F10-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720665 ID=EY720665; Name=EY720665; organism=Citrus sinensis; type=EST; length=841bp
CCACGCGTCCGATGAAATGGAACCGTCGCAAAAGGTTAATATGCCAAGAG
TTGATTGGATTGAACCCGGATATTATCTGTATGCAAGAGGTGGACAGGTA
TTTTGATATTCTGAATGTTATGGAGAAAACGGGATATGCTGGTTGTTACA
AGCGGCGCACTGGGGATAACGTTGATGGTTGTGCGATGTTTTGGAAAGCT
GATAAGTTTCGGTTATTAGAGCAAACAAGCATTGAATTTAAAGAGTTTGG
CCTTCGTGAAAATGTGGCACAACTTTCCGCTTTTGAGGCAGATGCGCAAC
ACAAAATCAAGAAGAGTACTGGTTGGTAACATACACGTTCTTTATAATCC
AAACCGAGGGGAAGTGAAATTAGGTCAAATTTGTTTTCTTTCCTCAAGGG
CACAAATTGTTGCAGAGAAATGGGGTAATATCCCTGTTGTGCTTGCTGGT
GACTTCAATATCACTCCTCAAAGTGCAATTTACAAGTTCTTATCATCATC
AGAGGTGAGATGCGTTAATTTATCTACTATGTGAGACAATGGCGTGATCT
GCGCCAACAGACTAATGAGCTGTATCACATATATTTGGACCCTGTCACTC
CGTCTGGTTCTTCGACATTCCACCTGTCTCCTTGGCGCACCTTAATACCA
CTCCTATGACAAAATAAACTTATCCGGTCGGGGAAAGTTGGCATCTGTCT
CGAGTTGCCGTGGTGCACAAAGCAGGTTCGCCAAGCCAGGATCGGGGGGA
GGACCGAATCCTCCCCATTGGCGAGGCCTTTCTCAACGGCTCACGTTCAA
CTGGCGGCGCTTGATCTTCTCCGCCCCACCCTCTCCCGATA
back to top