EY720663

Overview
NameEY720663
Unique NameEY720663
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length891
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720663 vs. ExPASy Swiss-Prot
Match: TRA1_MAIZE (Putative AC transposase OS=Zea mays PE=2 SV=2)

HSP 1 Score: 140.969 bits (354), Expect = 8.903e-33
Identity = 78/257 (30.35%), Postives = 132/257 (51.36%), Query Frame = 3
Query:    9 ASAFDDCSIDDDIVHKIKERISQNRPHS-SNGQLFDVCSAAHVLKSIVQDALEALHDVTEKIRGSIRYVKSSQLTQGKFNEIAQQVDINSQKGLVLDCPTRWNSTYFMLETALEYRNAFSALQDLDSEYSSALTETEWDWASSITGY--LQLFVEITNVFSGNKCPTANVYFPEICDVHIQLINWCKSPDEFLSSLALKMKSKFEKYWSKCSLALAMAAILNPPIKMKLVEYYYFQIYGITALERIKEVLNVLRNFH 770
            A + D+ S ++  VH I E +     +   +G  F V  A H+L  + +D L  +    EKI+  +  VKSS L   +  + A + D++  KG+  D  TRWNSTY ML  AL Y+ A   L+  D     A+     +W  ++T +  L+ F ++T + SG +  TAN+++   C++   +  WC      +  +A+ M  KFEKYW   ++ALA+A  L+P  K  L+E+Y  + +G +    + + + V+R  +
Sbjct:  363 ALSLDNASANEVAVHDIIEDLQDTDSNLVCDGAFFHVRCACHILNLVAKDGLAVIAGTIEKIKAIVLAVKSSPLQWEELMKCASECDLDKSKGISYDVSTRWNSTYLMLRDALYYKPALIRLKTSDPRRYDAICPKAEEWKMALTLFKCLKKFFDLTELLSGTQYSTANLFYKGFCEIKDLIDQWCVHEKFVIRRMAVAMSEKFEKYWKVSNIALAVACFLDPRYKKILIEFYMKKFHGDSYKVHVDDFVRVIRKLY 619          
BLAST of EY720663 vs. ExPASy Swiss-Prot
Match: TRAC9_MAIZE (Putative AC9 transposase OS=Zea mays PE=4 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.871e-28
Identity = 77/281 (27.40%), Postives = 128/281 (45.55%), Query Frame = 3
Query:    9 ASAFDDCSIDDDIVHKIKERISQNRPHS-SNGQLFDVCSAAHVLKSIVQDALEALHDVTEKIRGSIRYVKSSQLTQGKFNEIAQQVDINSQKGLVLDCPTRWNSTYFMLETALEYRNAFSALQDLDSE--------------------------YSSALTETEWDWASSITGYLQLFVEITNVFSGNKCPTANVYFPEICDVHIQLINWCKSPDEFLSSLALKMKSKFEKYWSKCSLALAMAAILNPPIKMKLVEYYYFQIYGITALERIKEVLNVLRNFH 770
            A + D+ S ++  VH I E +     +   +G  F V  A H+L  + +D L  +    EKI+  +  VKSS L   +  + A + D++  KG+  D  TRWNSTY ML  AL Y+ A   L+  D                                L      W  ++   L+ F ++T + SG +  TAN+++   C++   +  WC      +  +A+ M  KFEKYW   ++ALA+A  L+P  K  L+E+Y  + +G +    + + + V+R  +
Sbjct:  308 ALSLDNASANEVAVHDIIEDLQDTDSNLVCDGAFFHVRCACHILNLVAKDGLAVIAGTIEKIKAIVLAVKSSPLQWEELMKCASECDLDKSKGISYDVSTRWNSTYLMLRDALYYKPALIRLKTSDPRRYVCLNCCTCHHYKFSINQMSIIVGTMQFVLKPRSGRWHLTLFKCLKKFFDLTELLSGTQYSTANLFYKGFCEIKDLIDQWCCHEKFVIRRMAVAMSEKFEKYWKVSNIALAVACFLDPRYKKILIEFYMKKFHGDSYKVHVDDFVRVIRKLY 588          
The following BLAST results are available for this feature:
BLAST of EY720663 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
TRA1_MAIZE8.903e-3330.35Putative AC transposase OS=Zea mays PE=2 SV=2[more]
TRAC9_MAIZE3.871e-2827.40Putative AC9 transposase OS=Zea mays PE=4 SV=1[more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-703-012-F08-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720663 ID=EY720663; Name=EY720663; organism=Citrus sinensis; type=EST; length=891bp
GCGACCACGCGTCCGCATTTGATGATTGTTCCATTGATGATGATATCGTC
CACAAAATTAAAGAACGTATATCTCAGAATAGGCCTCATTCAAGTAATGG
CCAATTGTTTGATGTTTGCTCTGCTGCACATGTTCTGAAATCGATTGTTC
AGGATGCCTTGGAAGCACTTCATGATGTGACTGAGAAGATTCGAGGAAGT
ATAAGATATGTTAAGAGTTCACAGTTAACACAAGGAAAGTTCAATGAGAT
TGCCCAGCAAGTTGATATCAATAGTCAGAAGGGTCTAGTTCTTGATTGTC
CAACTAGATGGAACTCAACATATTTCATGCTAGAAACAGCCTTAGAGTAC
AGAAATGCATTTAGTGCCTTACAAGACCTTGACTCTGAGTACTCATCAGC
TTTAACTGAAACAGAGTGGGATTGGGCAAGTTCCATTACTGGCTATTTGC
AACTTTTTGTTGAAATCACCAACGTCTTCTCTGGCAACAAATGTCCAACT
GCAAATGTATATTTTCCTGAGATTTGTGACGTACATATCCAATTAATTAA
CTGGTGTAAGAGCCCAGATGAATTTCTGAGCTCCTTGGCTTTAAAGATGA
AAAGTAAGTTTGAAAAATATTGGAGCAAATGCAGCTTGGCTTTGGCAATG
GCAGCCATCTTAAATCCCCCGATCAAGATGAAGTTGGTGGAGTATTACTA
CTTTCAGATTTATGGTATTACTGCTCTTGAGCGAATCAAGGAAGTTCTGA
ATGTATTAAGGAACTTTCATTGCATATGGTATCTGGTCAACCAGGGTGGA
TCAAGGGTCTGCTGTGCCCAGAAGTAACTTCCAAGCGCCTAGTATGATGT
AAAAAATATTTAAGGGGTTCGACAAATCCTCCATGAAATTC
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