EY720661

Overview
NameEY720661
Unique NameEY720661
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length459
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720661 vs. ExPASy Swiss-Prot
Match: KDGR_BACSU (HTH-type transcriptional regulator kdgR OS=Bacillus subtilis GN=kdgR PE=4 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 2.937e-12
Identity = 42/143 (29.37%), Postives = 71/143 (49.65%), Query Frame = 2
Query:    2 VSRVLNGSXXXXXXXXXXXTVKRVRALAAELQYRTNPHAASLKTRRSRTIGVLVPRLSDMVLATIYEGVDEAAAEHGYLTFVSNTQDEPDKQRKLIDMALARRVDGLILGDAHSHDGAAPNPLLAELAQRDVPFVLVSRHADD 430
            VSR +NG             VK ++   AEL YR +  A  LK ++S+ IG +V  +++      + GV+E   ++GY   V NT + P+K+R+++    A  V+GLIL     +       +L   A++ +P +L+ R   D
Sbjct:   25 VSRYINGKIDAISPEK----VKNIKKAIAELNYRPSKMAQGLKIKKSKLIGFVVADITNPFSVAAFRGVEEVCDQYGYSIMVCNTDNSPEKEREMLLKLEAHSVEGLILNATGEN-----KDVLRAFAEQQIPTILIDRKLPD 158          
BLAST of EY720661 vs. ExPASy Swiss-Prot
Match: CCPA_STAES (Probable catabolite control protein A OS=Staphylococcus epidermidis (strain ATCC 12228) GN=ccpA PE=3 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 3.835e-12
Identity = 43/148 (29.05%), Postives = 81/148 (54.73%), Query Frame = 2
Query:    2 VSRVLNGSXXXXXXXXXXXTVKRVRALAAELQYRTNPHAASLKTRRSRTIGVLVPRLSDMVLATIYEGVDEAAAEHGYLTFVSNTQDEPDKQRKLIDMALARRVDGLI-LGDAHSHDGAAPNPLLAELAQRDVPFVLVSRHA-DDHCA 439
            VSRV+NG+           T  +V  +   L YR N  A  L ++R+ T+GV++P +S++  + +  G+++ A  + Y + +SN+ ++P+K++++ +  L+++VDG+I LG      G     + + + Q  VP V+      DDH A
Sbjct:   19 VSRVVNGNQNVKPE-----TRNKVNEVIKRLNYRPNAVARGLASKRTTTVGVIIPDISNVYYSQLARGLEDIATMYKYHSIISNSDNDPEKEKEIFNNLLSKQVDGIIFLG------GTISEEIKSLINQSSVPVVVSGTDGKDDHIA 155          
BLAST of EY720661 vs. ExPASy Swiss-Prot
Match: CCPA_STAEQ (Probable catabolite control protein A OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=ccpA PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 3.835e-12
Identity = 43/148 (29.05%), Postives = 81/148 (54.73%), Query Frame = 2
Query:    2 VSRVLNGSXXXXXXXXXXXTVKRVRALAAELQYRTNPHAASLKTRRSRTIGVLVPRLSDMVLATIYEGVDEAAAEHGYLTFVSNTQDEPDKQRKLIDMALARRVDGLI-LGDAHSHDGAAPNPLLAELAQRDVPFVLVSRHA-DDHCA 439
            VSRV+NG+           T  +V  +   L YR N  A  L ++R+ T+GV++P +S++  + +  G+++ A  + Y + +SN+ ++P+K++++ +  L+++VDG+I LG      G     + + + Q  VP V+      DDH A
Sbjct:   19 VSRVVNGNQNVKPE-----TRNKVNEVIKRLNYRPNAVARGLASKRTTTVGVIIPDISNVYYSQLARGLEDIATMYKYHSIISNSDNDPEKEKEIFNNLLSKQVDGIIFLG------GTISEEIKSLINQSSVPVVVSGTDGKDDHIA 155          
BLAST of EY720661 vs. ExPASy Swiss-Prot
Match: CCPA_STAAW (Probable catabolite control protein A OS=Staphylococcus aureus (strain MW2) GN=ccpA PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 3.247e-11
Identity = 39/144 (27.08%), Postives = 78/144 (54.17%), Query Frame = 2
Query:    2 VSRVLNGSXXXXXXXXXXXTVKRVRALAAELQYRTNPHAASLKTRRSRTIGVLVPRLSDMVLATIYEGVDEAAAEHGYLTFVSNTQDEPDKQRKLIDMALARRVDGLI-LGDAHSHDGAAPNPLLAELAQRDVPFVLVSRHADD 430
            VSRV+NG+           T  +V  +   L YR N  A  L ++++ T+GV++P +S++  + +  G+++ A  + Y + +SN+ ++P+K++++ +  L+++VDG+I LG      G     +   + Q  VP V+   +  D
Sbjct:   19 VSRVVNGNQNVKAE-----TKNKVNEVIKRLNYRPNAVARGLASKKTTTVGVIIPDISNIYYSQLARGLEDIATMYKYHSIISNSDNDPEKEKEIFNNLLSKQVDGIIFLG------GTITEEMKELINQSSVPVVVSGTNGKD 151          
BLAST of EY720661 vs. ExPASy Swiss-Prot
Match: CCPA_STAAS (Probable catabolite control protein A OS=Staphylococcus aureus (strain MSSA476) GN=ccpA PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 3.247e-11
Identity = 39/144 (27.08%), Postives = 78/144 (54.17%), Query Frame = 2
Query:    2 VSRVLNGSXXXXXXXXXXXTVKRVRALAAELQYRTNPHAASLKTRRSRTIGVLVPRLSDMVLATIYEGVDEAAAEHGYLTFVSNTQDEPDKQRKLIDMALARRVDGLI-LGDAHSHDGAAPNPLLAELAQRDVPFVLVSRHADD 430
            VSRV+NG+           T  +V  +   L YR N  A  L ++++ T+GV++P +S++  + +  G+++ A  + Y + +SN+ ++P+K++++ +  L+++VDG+I LG      G     +   + Q  VP V+   +  D
Sbjct:   19 VSRVVNGNQNVKAE-----TKNKVNEVIKRLNYRPNAVARGLASKKTTTVGVIIPDISNIYYSQLARGLEDIATMYKYHSIISNSDNDPEKEKEIFNNLLSKQVDGIIFLG------GTITEEMKELINQSSVPVVVSGTNGKD 151          
BLAST of EY720661 vs. ExPASy Swiss-Prot
Match: CCPA_STAAN (Probable catabolite control protein A OS=Staphylococcus aureus (strain N315) GN=ccpA PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 3.247e-11
Identity = 39/144 (27.08%), Postives = 78/144 (54.17%), Query Frame = 2
Query:    2 VSRVLNGSXXXXXXXXXXXTVKRVRALAAELQYRTNPHAASLKTRRSRTIGVLVPRLSDMVLATIYEGVDEAAAEHGYLTFVSNTQDEPDKQRKLIDMALARRVDGLI-LGDAHSHDGAAPNPLLAELAQRDVPFVLVSRHADD 430
            VSRV+NG+           T  +V  +   L YR N  A  L ++++ T+GV++P +S++  + +  G+++ A  + Y + +SN+ ++P+K++++ +  L+++VDG+I LG      G     +   + Q  VP V+   +  D
Sbjct:   19 VSRVVNGNQNVKAE-----TKNKVNEVIKRLNYRPNAVARGLASKKTTTVGVIIPDISNIYYSQLARGLEDIATMYKYHSIISNSDNDPEKEKEIFNNLLSKQVDGIIFLG------GTITEEMKELINQSSVPVVVSGTNGKD 151          
BLAST of EY720661 vs. ExPASy Swiss-Prot
Match: CCPA_STAAM (Probable catabolite control protein A OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=ccpA PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 3.247e-11
Identity = 39/144 (27.08%), Postives = 78/144 (54.17%), Query Frame = 2
Query:    2 VSRVLNGSXXXXXXXXXXXTVKRVRALAAELQYRTNPHAASLKTRRSRTIGVLVPRLSDMVLATIYEGVDEAAAEHGYLTFVSNTQDEPDKQRKLIDMALARRVDGLI-LGDAHSHDGAAPNPLLAELAQRDVPFVLVSRHADD 430
            VSRV+NG+           T  +V  +   L YR N  A  L ++++ T+GV++P +S++  + +  G+++ A  + Y + +SN+ ++P+K++++ +  L+++VDG+I LG      G     +   + Q  VP V+   +  D
Sbjct:   19 VSRVVNGNQNVKAE-----TKNKVNEVIKRLNYRPNAVARGLASKKTTTVGVIIPDISNIYYSQLARGLEDIATMYKYHSIISNSDNDPEKEKEIFNNLLSKQVDGIIFLG------GTITEEMKELINQSSVPVVVSGTNGKD 151          
BLAST of EY720661 vs. ExPASy Swiss-Prot
Match: CCPA_STAAC (Probable catabolite control protein A OS=Staphylococcus aureus (strain COL) GN=ccpA PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 3.247e-11
Identity = 39/144 (27.08%), Postives = 78/144 (54.17%), Query Frame = 2
Query:    2 VSRVLNGSXXXXXXXXXXXTVKRVRALAAELQYRTNPHAASLKTRRSRTIGVLVPRLSDMVLATIYEGVDEAAAEHGYLTFVSNTQDEPDKQRKLIDMALARRVDGLI-LGDAHSHDGAAPNPLLAELAQRDVPFVLVSRHADD 430
            VSRV+NG+           T  +V  +   L YR N  A  L ++++ T+GV++P +S++  + +  G+++ A  + Y + +SN+ ++P+K++++ +  L+++VDG+I LG      G     +   + Q  VP V+   +  D
Sbjct:   19 VSRVVNGNQNVKAE-----TKNKVNEVIKRLNYRPNAVARGLASKKTTTVGVIIPDISNIYYSQLARGLEDIATMYKYHSIISNSDNDPEKEKEIFNNLLSKQVDGIIFLG------GTITEEMKELINQSSVPVVVSGTNGKD 151          
BLAST of EY720661 vs. ExPASy Swiss-Prot
Match: CCPA_STAAR (Probable catabolite control protein A OS=Staphylococcus aureus (strain MRSA252) GN=ccpA PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 4.241e-11
Identity = 39/144 (27.08%), Postives = 78/144 (54.17%), Query Frame = 2
Query:    2 VSRVLNGSXXXXXXXXXXXTVKRVRALAAELQYRTNPHAASLKTRRSRTIGVLVPRLSDMVLATIYEGVDEAAAEHGYLTFVSNTQDEPDKQRKLIDMALARRVDGLI-LGDAHSHDGAAPNPLLAELAQRDVPFVLVSRHADD 430
            VSRV+NG+           T  +V  +   L YR N  A  L ++++ T+GV++P +S++  + +  G+++ A  + Y + +SN+ ++P+K++++ +  L+++VDG+I LG      G     +   + Q  VP V+   +  D
Sbjct:   19 VSRVVNGNQNVKAE-----TKNKVNEVIKRLNYRPNAVARGLASKKTTTVGVIIPDISNIYYSQLARGLEDIAIMYKYHSIISNSDNDPEKEKEIFNNLLSKQVDGIIFLG------GTITEEMKELINQSSVPVVVSGTNGKD 151          
BLAST of EY720661 vs. ExPASy Swiss-Prot
Match: CCPA_STAXY (Probable catabolite control protein A OS=Staphylococcus xylosus GN=ccpA PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 5.538e-11
Identity = 32/108 (29.63%), Postives = 66/108 (61.11%), Query Frame = 2
Query:    2 VSRVLNGSXXXXXXXXXXXTVKRVRALAAELQYRTNPHAASLKTRRSRTIGVLVPRLSDMVLATIYEGVDEAAAEHGYLTFVSNTQDEPDKQRKLIDMALARRVDGLI 325
            VSRV+NG+           T  +V  +  +L YR N  A  L ++R+ T+GV++P +S++  + +  G+++ A  + Y + +SN+ ++P K++++ +  L+++VDG+I
Sbjct:   19 VSRVVNGNQNVKPE-----TRDKVNEVIKKLNYRPNAVARGLASKRTTTVGVIIPDISNVYYSQLARGLEDIATMYKYHSIISNSDNDPSKEKEIFNNLLSKQVDGII 121          
The following BLAST results are available for this feature:
BLAST of EY720661 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 10
Match NameE-valueIdentityDescription
KDGR_BACSU2.937e-1229.37HTH-type transcriptional regulator kdgR OS=Bacillu... [more]
CCPA_STAES3.835e-1229.05Probable catabolite control protein A OS=Staphyloc... [more]
CCPA_STAEQ3.835e-1229.05Probable catabolite control protein A OS=Staphyloc... [more]
CCPA_STAAW3.247e-1127.08Probable catabolite control protein A OS=Staphyloc... [more]
CCPA_STAAS3.247e-1127.08Probable catabolite control protein A OS=Staphyloc... [more]
CCPA_STAAN3.247e-1127.08Probable catabolite control protein A OS=Staphyloc... [more]
CCPA_STAAM3.247e-1127.08Probable catabolite control protein A OS=Staphyloc... [more]
CCPA_STAAC3.247e-1127.08Probable catabolite control protein A OS=Staphyloc... [more]
CCPA_STAAR4.241e-1127.08Probable catabolite control protein A OS=Staphyloc... [more]
CCPA_STAXY5.538e-1129.63Probable catabolite control protein A OS=Staphyloc... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-703-012-F06-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720661 ID=EY720661; Name=EY720661; organism=Citrus sinensis; type=EST; length=459bp
CGTGTCCCGCGTCCTCAACGGTTCCGACGACGACGCGCGCGCCGCCGCCG
CGCCGGACACGGTCAAGCGGGTCCGGGCGCTGGCCGCCGAACTGCAATAT
CGGACCAACCCCCACGCGGCCAGCCTCAAGACGCGCCGCAGCCGCACCAT
CGGGGTGCTGGTGCCGCGCCTGTCCGACATGGTGCTGGCCACCATCTACG
AAGGCGTGGACGAGGCCGCCGCCGAGCACGGCTACCTGACCTTCGTCTCC
AACACCCAGGACGAGCCCGACAAGCAGCGCAAGCTGATCGACATGGCGCT
GGCGCGGCGCGTGGACGGCCTGATCCTGGGCGACGCCCACAGCCACGACG
GCGCGGCGCCCAATCCGCTGCTGGCCGAGCTGGCGCAGCGCGACGTGCCG
TTCGTGCTGGTCAGCCGCCACGCCGACGACCACTGCGCCGTGACCTGCGA
CGACATCGA
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