EY720648
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY720648 vs. ExPASy Swiss-Prot
Match: DCE_PETHY (Glutamate decarboxylase OS=Petunia hybrida GN=GAD PE=1 SV=1) HSP 1 Score: 205.297 bits (521), Expect = 7.578e-53 Identity = 98/124 (79.03%), Postives = 109/124 (87.90%), Query Frame = 2 Query: 35 MVIQQQKQTPGEILNSTFASRYVRAAIPRFKMPDNSMPKEAAYQVINDELMLDGNPRLNLASFVTTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLCNTPVADDKTAVGVGTV 406 MV+ + ++STFASRYVR ++PRFKMPDNS+PKEAAYQ+INDELMLDGNPRLNLASFVTTWMEPECDKL+M SINKNYVDMDEYPVTTELQNRCVNMIAHL N P+ D +TAVGVGTV Sbjct: 1 MVLSKTVSQSDVSIHSTFASRYVRTSLPRFKMPDNSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLMMDSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLEDGETAVGVGTV 124 HSP 2 Score: 23.483 bits (49), Expect = 7.578e-53 Identity = 10/23 (43.48%), Postives = 13/23 (56.52%), Query Frame = 1 Query: 430 LAGLGVRRKWGRRRKEAGHA*DE 498 LAGL +RKW + K G D+ Sbjct: 132 LAGLAFKRKWQNKMKAQGKPCDK 154
BLAST of EY720648 vs. ExPASy Swiss-Prot
Match: DCE1_ARATH (Glutamate decarboxylase 1 OS=Arabidopsis thaliana GN=GAD1 PE=1 SV=2) HSP 1 Score: 202.986 bits (515), Expect = 7.578e-53 Identity = 96/124 (77.42%), Postives = 109/124 (87.90%), Query Frame = 2 Query: 35 MVIQQQKQTPGEILNSTFASRYVRAAIPRFKMPDNSMPKEAAYQVINDELMLDGNPRLNLASFVTTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLCNTPVADDKTAVGVGTV 406 MV+ ++STFASRYVR ++PRFKMP+NS+PKEAAYQ+INDELMLDGNPRLNLASFVTTWMEPECDKL+M+SINKNYVDMDEYPVTTELQNRCVNMIAHL N P+ + +TAVGVGTV Sbjct: 1 MVLSHAVSESDVSVHSTFASRYVRTSLPRFKMPENSIPKEAAYQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMSSINKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLEEAETAVGVGTV 124 HSP 2 Score: 25.7942 bits (55), Expect = 7.578e-53 Identity = 11/23 (47.83%), Postives = 14/23 (60.87%), Query Frame = 1 Query: 430 LAGLGVRRKWGRRRKEAGHA*DE 498 LAGL +RKW +RK G D+ Sbjct: 132 LAGLAFKRKWQNKRKAEGKPVDK 154
BLAST of EY720648 vs. ExPASy Swiss-Prot
Match: DCE_SOLLC (Glutamate decarboxylase OS=Solanum lycopersicum PE=2 SV=1) HSP 1 Score: 198.749 bits (504), Expect = 1.824e-51 Identity = 92/113 (81.42%), Postives = 104/113 (92.04%), Query Frame = 2 Query: 68 EILNSTFASRYVRAAIPRFKMPDNSMPKEAAYQVINDELMLDGNPRLNLASFVTTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLCNTPVADDKTAVGVGTV 406 E L+ TFASRYV+ +P+FKMP SMPKEAAYQ++NDELMLDGNPRLNLASFV+TWMEPECDKL+M+SINKNYVDMDEYPVTTELQNRCVNM+AHL + PV DD+TAVGVGTV Sbjct: 13 ESLHCTFASRYVQEPLPKFKMPKKSMPKEAAYQIVNDELMLDGNPRLNLASFVSTWMEPECDKLIMSSINKNYVDMDEYPVTTELQNRCVNMLAHLFHAPVGDDETAVGVGTV 125 HSP 2 Score: 25.409 bits (54), Expect = 1.824e-51 Identity = 11/23 (47.83%), Postives = 14/23 (60.87%), Query Frame = 1 Query: 430 LAGLGVRRKWGRRRKEAGHA*DE 498 LAGL +RKW +RK G D+ Sbjct: 133 LAGLAFKRKWQSKRKAEGKPFDK 155
BLAST of EY720648 vs. ExPASy Swiss-Prot
Match: DCE2_ARATH (Glutamate decarboxylase 2 OS=Arabidopsis thaliana GN=GAD2 PE=1 SV=1) HSP 1 Score: 180.259 bits (456), Expect = 4.671e-46 Identity = 84/116 (72.41%), Postives = 100/116 (86.21%), Query Frame = 2 Query: 59 TPGEILNSTFASRYVRAAIPRFKMPDNSMPKEAAYQVINDELMLDGNPRLNLASFVTTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLCNTPVADDKTAVGVGTV 406 T E + + F SRYVR +P++++ +NS+PK+AAYQ+I DELMLDGNPRLNLASFVTTWMEPECDKL+M SINKNYVDMDEYPVTTELQNRCVN+IA L N P+ + +TAVGVGTV Sbjct: 8 TNDESVCTMFGSRYVRTTLPKYEIGENSIPKDAAYQIIKDELMLDGNPRLNLASFVTTWMEPECDKLIMDSINKNYVDMDEYPVTTELQNRCVNIIARLFNAPLEESETAVGVGTV 123 HSP 2 Score: 25.7942 bits (55), Expect = 4.671e-46 Identity = 11/23 (47.83%), Postives = 14/23 (60.87%), Query Frame = 1 Query: 430 LAGLGVRRKWGRRRKEAGHA*DE 498 LAGL +RKW +RK G D+ Sbjct: 131 LAGLAFKRKWQNKRKAEGKPYDK 153
BLAST of EY720648 vs. ExPASy Swiss-Prot
Match: DCE_LACLM (Glutamate decarboxylase OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=gadB PE=1 SV=2) HSP 1 Score: 102.064 bits (253), Expect = 4.843e-21 Identity = 49/124 (39.52%), Postives = 77/124 (62.10%), Query Frame = 2 Query: 35 MVIQQQKQTPGEILNSTFASRYVRAAIPRFKMPDNSMPKEAAYQVINDELMLDGNPRLNLASFVTTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLCNTPVADDKTAVGVGTV 406 M+ ++ + E L F S + +P++K+ S+ AYQ++ DE++ +GN RLNLA+F T+MEPE KL+ ++ KN +D EYP TTE++NRCVNMIA L N ++ + +G T+ Sbjct: 1 MLYGKENRDEAEFLEPIFGSESEQVDLPKYKLAQQSIEPRVAYQLVQDEMLDEGNARLNLATFCQTYMEPEAVKLMSQTLEKNAIDKSEYPRTTEIENRCVNMIADLWN--ASEKEKFMGTSTI 122
BLAST of EY720648 vs. ExPASy Swiss-Prot
Match: DCE_LACLA (Glutamate decarboxylase OS=Lactococcus lactis subsp. lactis GN=gadB PE=1 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 4.843e-21 Identity = 49/124 (39.52%), Postives = 77/124 (62.10%), Query Frame = 2 Query: 35 MVIQQQKQTPGEILNSTFASRYVRAAIPRFKMPDNSMPKEAAYQVINDELMLDGNPRLNLASFVTTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLCNTPVADDKTAVGVGTV 406 M+ ++ + E L F S + +P++K+ S+ AYQ++ DE++ +GN RLNLA+F T+MEPE KL+ ++ KN +D EYP TTE++NRCVNMIA L N ++ + +G T+ Sbjct: 1 MLYGKENRDEAEFLEPIFGSESEQVDLPKYKLAQQSIEPRVAYQLVQDEMLDEGNARLNLATFCQTYMEPEAVKLMSQTLEKNAIDKSEYPRTTEIENRCVNMIADLWN--ASEKEKFMGTSTI 122
BLAST of EY720648 vs. ExPASy Swiss-Prot
Match: DCEB_SHIFL (Glutamate decarboxylase beta OS=Shigella flexneri GN=gadB PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 6.993e-20 Identity = 47/113 (41.59%), Postives = 69/113 (61.06%), Query Frame = 2 Query: 68 EILNSTFASRYVRAAIPRFKMPDNSMPKEAAYQVINDELMLDGNPRLNLASFVTTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLCNTPVADDKTAVGVGTV 406 E+L+S F ++ + + P + M + A+Q+INDEL LDGN R NLA+F TW + KL+ SINKN++D +EYP + + RCVNM+A L + P + AVG T+ Sbjct: 12 ELLDSRFGAKSISTIAESKRFPLHEMRDDVAFQIINDELYLDGNARQNLATFCQTWDDENVHKLMDLSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTI 124
BLAST of EY720648 vs. ExPASy Swiss-Prot
Match: DCEB_ECOLI (Glutamate decarboxylase beta OS=Escherichia coli (strain K12) GN=gadB PE=1 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 6.993e-20 Identity = 47/113 (41.59%), Postives = 69/113 (61.06%), Query Frame = 2 Query: 68 EILNSTFASRYVRAAIPRFKMPDNSMPKEAAYQVINDELMLDGNPRLNLASFVTTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLCNTPVADDKTAVGVGTV 406 E+L+S F ++ + + P + M + A+Q+INDEL LDGN R NLA+F TW + KL+ SINKN++D +EYP + + RCVNM+A L + P + AVG T+ Sbjct: 12 ELLDSRFGAKSISTIAESKRFPLHEMRDDVAFQIINDELYLDGNARQNLATFCQTWDDENVHKLMDLSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTI 124
BLAST of EY720648 vs. ExPASy Swiss-Prot
Match: DCEB_ECOL6 (Glutamate decarboxylase beta OS=Escherichia coli O6 GN=gadB PE=2 SV=2) HSP 1 Score: 98.2117 bits (243), Expect = 6.993e-20 Identity = 47/113 (41.59%), Postives = 69/113 (61.06%), Query Frame = 2 Query: 68 EILNSTFASRYVRAAIPRFKMPDNSMPKEAAYQVINDELMLDGNPRLNLASFVTTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLCNTPVADDKTAVGVGTV 406 E+L+S F ++ + + P + M + A+Q+INDEL LDGN R NLA+F TW + KL+ SINKN++D +EYP + + RCVNM+A L + P + AVG T+ Sbjct: 12 ELLDSRFGAKSISTIAESKRFPLHEMRDDVAFQIINDELYLDGNARQNLATFCQTWDDDNVHKLMDLSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTI 124
BLAST of EY720648 vs. ExPASy Swiss-Prot
Match: DCEB_ECO57 (Glutamate decarboxylase beta OS=Escherichia coli O157:H7 GN=gadB PE=2 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 6.993e-20 Identity = 47/113 (41.59%), Postives = 69/113 (61.06%), Query Frame = 2 Query: 68 EILNSTFASRYVRAAIPRFKMPDNSMPKEAAYQVINDELMLDGNPRLNLASFVTTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLCNTPVADDKTAVGVGTV 406 E+L+S F ++ + + P + M + A+Q+INDEL LDGN R NLA+F TW + KL+ SINKN++D +EYP + + RCVNM+A L + P + AVG T+ Sbjct: 12 ELLDSRFGAKSISTIAESKRFPLHEMRDDVAFQIINDELYLDGNARQNLATFCQTWDDENVHKLMDLSINKNWIDKEEYPQSAAIDLRCVNMVADLWHAPAPKNGQAVGTNTI 124 The following BLAST results are available for this feature:
BLAST of EY720648 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 22
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Sequences
The
following sequences are available for this feature:
EST sequence >EY720648 ID=EY720648; Name=EY720648; organism=Citrus sinensis; type=EST; length=925bpback to top |