EY720620

Overview
NameEY720620
Unique NameEY720620
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length823
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720620 vs. ExPASy Swiss-Prot
Match: CISY2_ARATH (Citrate synthase 2, peroxisomal OS=Arabidopsis thaliana GN=CSY2 PE=2 SV=1)

HSP 1 Score: 228.794 bits (582), Expect = 3.652e-63
Identity = 112/149 (75.17%), Postives = 126/149 (84.56%), Query Frame = 1
Query:  154 RGRLAVLTAHLASTES----NQGRLIEPWCTSAQSMVPPPGNLKGSLTVVDERTGKRYQIPVSQEGTVKATDFKKITTGKNDKGLKLYDPGYLNTAPVRSSICYIDGDEGILXYRGYPIEELAESSSFLEVAYLLMYGNLPSESQLTDW 588
            + RLAVLTAHLA +++         I PWCTSA     P G+LKG+LT+VDERTGK+YQ+PVS+ GTVKA D KKITTGK+DKGLKLYDPGYLNTAPVRSSICYIDGDEGIL YRGYPIEELAESS+F+EVAYLLMYGNLPS+SQL DW
Sbjct:    8 KARLAVLTAHLAVSDTVGLEQVLPAIAPWCTSAHITAAPHGSLKGNLTIVDERTGKKYQVPVSEHGTVKAVDLKKITTGKDDKGLKLYDPGYLNTAPVRSSICYIDGDEGILRYRGYPIEELAESSTFIEVAYLLMYGNLPSQSQLADW 156          

HSP 2 Score: 35.039 bits (79), Expect = 3.652e-63
Identity = 16/29 (55.17%), Postives = 19/29 (65.52%), Query Frame = 2
Query:  590 ELAVCEDSGVAEGVWDIIQAMPS*CHPMG 676
            E  V + S V +GV DIIQ+MP   HPMG
Sbjct:  157 EFTVSQHSAVPQGVLDIIQSMPHDAHPMG 185          
BLAST of EY720620 vs. ExPASy Swiss-Prot
Match: CISY3_ARATH (Citrate synthase 3, peroxisomal OS=Arabidopsis thaliana GN=CSY3 PE=1 SV=1)

HSP 1 Score: 223.787 bits (569), Expect = 3.979e-62
Identity = 109/145 (75.17%), Postives = 124/145 (85.52%), Query Frame = 1
Query:  154 RGRLAVLTAHLASTESNQGRLIEPWCTSAQSMVPPPGNLKGSLTVVDERTGKRYQIPVSQEGTVKATDFKKITTGKNDKGLKLYDPGYLNTAPVRSSICYIDGDEGILXYRGYPIEELAESSSFLEVAYLLMYGNLPSESQLTDW 588
            R RLAVL+ HL+  + +    IE WCTSA + V P G+LKG+LT+VDERTGK Y++PVS +GTVKA DFKKI TGK DKGLKLYDPGYLNTAPVRSSI YIDGDEGIL YRGYPIEE+AE+S+FLEVAYLLMYGNLPSESQL+DW
Sbjct:    8 RARLAVLSGHLSEGKQDSPA-IERWCTSADTSVAPLGSLKGTLTIVDERTGKNYKVPVSDDGTVKAVDFKKIVTGKEDKGLKLYDPGYLNTAPVRSSISYIDGDEGILRYRGYPIEEMAENSTFLEVAYLLMYGNLPSESQLSDW 151          

HSP 2 Score: 36.5798 bits (83), Expect = 3.979e-62
Identity = 17/29 (58.62%), Postives = 20/29 (68.97%), Query Frame = 2
Query:  590 ELAVCEDSGVAEGVWDIIQAMPS*CHPMG 676
            E AV + S V +GV DIIQ+MP   HPMG
Sbjct:  152 EFAVSQHSAVPQGVLDIIQSMPHDAHPMG 180          
BLAST of EY720620 vs. ExPASy Swiss-Prot
Match: CYSZ_CUCMA (Citrate synthase, glyoxysomal OS=Cucurbita maxima PE=1 SV=1)

HSP 1 Score: 221.09 bits (562), Expect = 4.334e-61
Identity = 112/161 (69.57%), Postives = 128/161 (79.50%), Query Frame = 1
Query:  115 MAPSVESSSAVTARGRLAVLTAHLASTESN---QGRLIEPWCTSAQSMVPPPGNLKGSLTVVDERTGKRYQIPVSQEGTVKATDFKKITTGKNDKGLKLYDPGYLNTAPVRSSICYIDGDEGILXYRGYPIEELAESSSFLEVAYLLMYGNLPSESQLTDW 588
            M   +E S +  AR RLAVL AHL++           +E  C SAQ+MV PP  +KG+LT+VDERTGKRYQ+ VS+EGT+KATD KKITTG NDKGLKLYDPGYLNTAPVRSSI YIDGD GIL YRGYPIEELAESS+++EVAYLLMYGNLPS+SQL DW
Sbjct:    1 MPTDMELSPSNVARHRLAVLAAHLSAASLEPPVMASSLEAHCVSAQTMVAPPELVKGTLTIVDERTGKRYQVQVSEEGTIKATDLKKITTGPNDKGLKLYDPGYLNTAPVRSSISYIDGDLGILRYRGYPIEELAESSTYVEVAYLLMYGNLPSQSQLADW 161          

HSP 2 Score: 35.8094 bits (81), Expect = 4.334e-61
Identity = 16/29 (55.17%), Postives = 20/29 (68.97%), Query Frame = 2
Query:  590 ELAVCEDSGVAEGVWDIIQAMPS*CHPMG 676
            E A+ + S V +G+ DIIQAMP   HPMG
Sbjct:  162 EFAISQHSAVPQGLVDIIQAMPHDAHPMG 190          
BLAST of EY720620 vs. ExPASy Swiss-Prot
Match: CISY1_ARATH (Citrate synthase 1, peroxisomal OS=Arabidopsis thaliana GN=CSY1 PE=2 SV=1)

HSP 1 Score: 215.698 bits (548), Expect = 3.024e-59
Identity = 105/147 (71.43%), Postives = 117/147 (79.59%), Query Frame = 1
Query:  151 ARGRLAVLTAHLASTESNQGR-LIEPWCTSAQSMVPPPGNLKGSLTVVDERTGKRYQIPVSQEGTVKATDFKKITTGKNDKGLKLYDPGYLNTAPVRSSICYIDGDEGILXYRGYPIEELAESSSFLEVAYLLMYGNLPSESQLTDW 588
            AR RLAVL AHL  +E NQ    IEPWCTSA     P G+LKG+L +VDERTG  YQ+PVS+ GTVK  D KKITTGK+DKGL LYDPGYLNTAPVRSSI YIDGDEGIL YRGYP+EELAE S++ EV YLL+YGNLPS+ QL DW
Sbjct:    7 ARARLAVLNAHLTVSEPNQVLPAIEPWCTSAHITAAPHGSLKGNLKIVDERTGNEYQVPVSEHGTVKTVDLKKITTGKDDKGLNLYDPGYLNTAPVRSSISYIDGDEGILRYRGYPVEELAEKSTYTEVTYLLIYGNLPSQRQLADW 153          

HSP 2 Score: 35.039 bits (79), Expect = 3.024e-59
Identity = 14/30 (46.67%), Postives = 23/30 (76.67%), Query Frame = 2
Query:  590 ELAVCEDSGVAEGVWDIIQAMPS*CHPMGS 679
            E A+ ++S V +GV D+IQ+MP+  HP+G+
Sbjct:  154 EFAISQNSAVPQGVLDMIQSMPNDVHPVGA 183          
BLAST of EY720620 vs. ExPASy Swiss-Prot
Match: CISYC_DICDI (Citrate synthase OS=Dictyostelium discoideum GN=gltA PE=3 SV=1)

HSP 1 Score: 132.88 bits (333), Expect = 2.151e-30
Identity = 65/106 (61.32%), Postives = 79/106 (74.53%), Query Frame = 1
Query:  271 KGSLTVVDERTGKRYQIPVSQEGTVKATDFKKITTGKNDKGLKLYDPGYLNTAPVRSSICYIDGDEGILXYRGYPIEELAESSSFLEVAYLLMYGNLPSESQLTDW 588
            K +LTV+D RTGK Y+IP++ E TVK+ DF+ I     D G  +YDPGY NTA  +S I YIDGD GIL YRGYPIE+LAE SSFLEV+YLL+YG+LPS+ Q   W
Sbjct:   16 KNTLTVIDNRTGKSYEIPINHE-TVKSIDFRAIKEQSIDFGTMIYDPGYYNTAVCKSQITYIDGDRGILEYRGYPIEQLAEKSSFLEVSYLLIYGDLPSKEQSNLW 120          
BLAST of EY720620 vs. ExPASy Swiss-Prot
Match: CISYP_DICDI (Citrate synthase, peroxisomal OS=Dictyostelium discoideum GN=cshA PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 1.067e-29
Identity = 71/143 (49.65%), Postives = 91/143 (63.64%), Query Frame = 1
Query:  160 RLAVLTAHLASTESNQGRLIEPWCTSAQSMVPPPGNLKGSLTVVDERTGKRYQIPVSQEGTVKATDFKKITTGKNDKGLKLYDPGYLNTAPVRSSICYIDGDEGILXYRGYPIEELAESSSFLEVAYLLMYGNLPSESQLTDW 588
            R+ +L  HL+  E  +  L+    TS  S        K ++TV D R GK Y   +  + T+ A +FK++   K D GL +YDPG+ NTA V S I YIDGD+GIL YRGYPIEELAE S+FLEVAYLL+ GNLP++SQL  W
Sbjct:    6 RINILANHLSKEEEEENELL----TSPVSA----DKKKETVTVTDNRNGKSYDFKIKND-TINALNFKELQLAKGDGGLMIYDPGFQNTAVVTSYITYIDGDKGILRYRGYPIEELAERSNFLEVAYLLINGNLPNKSQLDGW 139          
BLAST of EY720620 vs. ExPASy Swiss-Prot
Match: CISY_BRAJA (Citrate synthase OS=Bradyrhizobium japonicum GN=gltA PE=3 SV=2)

HSP 1 Score: 91.2781 bits (225), Expect = 7.177e-18
Identity = 47/94 (50.00%), Postives = 60/94 (63.83%), Query Frame = 1
Query:  307 KRYQIPVSQEGTVKATDFKKITTGKNDKGLKLYDPGYLNTAPVRSSICYIDGDEGILXYRGYPIEELAESSSFLEVAYLLMYGNLPSESQLTDW 588
            K Y +P+   G+V   D   I       GL  YDPG+ +TA  +S I YIDGD G+L YRGYPIE+LAE+  FLE  YLL+YGNLP+ +Q  D+
Sbjct:   17 KNYDLPI-HSGSV-GPDVIDIGKLYGQSGLFTYDPGFTSTASCQSKITYIDGDAGVLEYRGYPIEQLAENGDFLETCYLLLYGNLPTAAQKKDF 108          
BLAST of EY720620 vs. ExPASy Swiss-Prot
Match: CISY_RICCA (Citrate synthase (Fragment) OS=Rickettsia canadensis GN=gltA PE=3 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 4.652e-17
Identity = 44/95 (46.32%), Postives = 63/95 (66.32%), Query Frame = 1
Query:  304 GKRYQIPVSQEGTVKATDFKKITTGKNDKGLKLYDPGYLNTAPVRSSICYIDGDEGILXYRGYPIEELAESSSFLEVAYLLMYGNLPSESQLTDW 588
            GK +++P+ +       D   I+   ++     YDPG+++TA  RS+I YIDGD+GIL YRGY I++LA+ S FLEVAYLL+YG LPS  Q  ++
Sbjct:   11 GKIFKLPILKASI--GEDVIDISRVSSEADCFTYDPGFMSTASCRSTITYIDGDKGILRYRGYDIKDLADKSDFLEVAYLLIYGELPSSEQYNNF 103          
BLAST of EY720620 vs. ExPASy Swiss-Prot
Match: CISY_RICPR (Citrate synthase OS=Rickettsia prowazekii GN=gltA PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 1.036e-16
Identity = 44/91 (48.35%), Postives = 61/91 (67.03%), Query Frame = 1
Query:  304 GKRYQIPVSQEGTVKATDFKKITTGKNDKGLKLYDPGYLNTAPVRSSICYIDGDEGILXYRGYPIEELAESSSFLEVAYLLMYGNLPSESQ 576
            GK +++P+ +    K  D   I+    +     YDPG+++TA  +S+I YIDGD+GIL YRGY I++LAE S FLEVAYL++YG LPS  Q
Sbjct:   18 GKLFKLPILKASIGK--DVIDISRVSAEADYFTYDPGFMSTASCQSTITYIDGDKGILWYRGYDIKDLAEKSDFLEVAYLMIYGELPSSDQ 106          
BLAST of EY720620 vs. ExPASy Swiss-Prot
Match: CISY_RICBR (Citrate synthase OS=Rickettsia bellii (strain RML369-C) GN=gltA PE=3 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.353e-16
Identity = 39/62 (62.90%), Postives = 50/62 (80.65%), Query Frame = 1
Query:  403 YDPGYLNTAPVRSSICYIDGDEGILXYRGYPIEELAESSSFLEVAYLLMYGNLPSESQLTDW 588
            YDPG+++TA  RS+I YIDGD+GIL +RGY I++LAE S FLEVAYLL+YG LP+  Q  D+
Sbjct:   48 YDPGFMSTASCRSTITYIDGDQGILRHRGYDIKDLAEKSDFLEVAYLLIYGELPNNKQYNDF 109          
The following BLAST results are available for this feature:
BLAST of EY720620 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 40
Match NameE-valueIdentityDescription
CISY2_ARATH3.652e-6375.17Citrate synthase 2, peroxisomal OS=Arabidopsis tha... [more]
CISY3_ARATH3.979e-6275.17Citrate synthase 3, peroxisomal OS=Arabidopsis tha... [more]
CYSZ_CUCMA4.334e-6169.57Citrate synthase, glyoxysomal OS=Cucurbita maxima ... [more]
CISY1_ARATH3.024e-5971.43Citrate synthase 1, peroxisomal OS=Arabidopsis tha... [more]
CISYC_DICDI2.151e-3061.32Citrate synthase OS=Dictyostelium discoideum GN=gl... [more]
CISYP_DICDI1.067e-2949.65Citrate synthase, peroxisomal OS=Dictyostelium dis... [more]
CISY_BRAJA7.177e-1850.00Citrate synthase OS=Bradyrhizobium japonicum GN=gl... [more]
CISY_RICCA4.652e-1746.32Citrate synthase (Fragment) OS=Rickettsia canadens... [more]
CISY_RICPR1.036e-1648.35Citrate synthase OS=Rickettsia prowazekii GN=gltA ... [more]
CISY_RICBR1.353e-1662.90Citrate synthase OS=Rickettsia bellii (strain RML3... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-012-A11-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720620 ID=EY720620; Name=EY720620; organism=Citrus sinensis; type=EST; length=823bp
CCACGCGTCCGATCAAACTTGAAGGCAAATTCATTTATTCAATTTGTATT
GACTCATTCATCAACCGAATCAATTGGACTAGAGCTCGTTTTATCTAGTT
TTGCTTCAAAAACAATGGCGCCAAGCGTAGAATCATCGTCGGCCGTTACA
GCTCGTGGGCGGTTGGCCGTACTGACAGCTCATTTGGCATCAACCGAGTC
AAATCAAGGCAGGCTCATCGAGCCATGGTGCACCTCTGCTCAGTCCATGG
TACCACCTCCGGGAAATCTCAAGGGCAGCTTGACCGTCGTCGACGAACGA
ACCGGCAAAAGATACCAGATACCTGTCTCTCAGGAAGGCACCGTTAAAGC
CACCGACTTCAAGAAGATAACAACAGGAAAGAACGACAAGGGTTTGAAAC
TGTATGATCCGGGGTACTTGAACACGGCGCCTGTGAGATCATCAATTTGT
TATATTGATGGAGATGAGGGTATCCTTANATACAGAGGCTACCCTATTGA
GGAATTGGCAGAGTCCAGTTCTTTCTTGGAAGTCGCTTATCTTTTGATGT
ATGGGAATTTGCCTTCCGAGAGTCAGCTGACAGACTGGGGAATTGGCTGT
GTGTGAGGATTCTGGCGTGGCGGAGGGAGTTTGGGATATTATCCAAGCGA
TGCCGTCGTGATGCCACCCTATGGGAAGTGGTTGTCAGAGCTATGAATGC
TCTTTCCTATCTTGATCGGGAATGCCGACCCTGGTCTGAGACGCCAAAAT
AGGACGATGGCGAGACACGGGGGGGACCAGCGCACTGCACAGTATAGGTG
AGAAGGGACCGACGCATGGAGGG
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