EY720611

Overview
NameEY720611
Unique NameEY720611
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length858
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of EY720611 vs. ExPASy Swiss-Prot
Match: SCYL2_HUMAN (SCY1-like protein 2 OS=Homo sapiens GN=SCYL2 PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.812e-12
Identity = 42/120 (35.00%), Postives = 68/120 (56.67%), Query Frame = 1 
Query:   25 KIDFELVTLPALFPVLSTASG-ETLLLLVKHADLIINKTSHEHLVSHVLPMLVRAYGDTDPRIQEEVLRRSVPLAKQLDVQLVKQAIVPRVQGLALKTTVAAVRVNALLCLGYLVSLLDK 381
            K ++  + LP L PV       + LL+ ++  DL++ KT  + + + VLPM+ RA      +IQE  L      A  +D   +K A++PR++   L+T+  AVRVN+L+CLG ++  LDK
Sbjct:  402 KEEYVKLILPELGPVFKQQEPIQILLIFLQKMDLLLTKTPPDEIKNSVLPMVYRALEAPSIQIQELCLNIIPTFANLIDYPSMKNALIPRIKNACLQTSSLAVRVNSLVCLGKILEYLDK 521
[Close]
BLAST of EY720611 vs. ExPASy Swiss-Prot
Match: SCYL2_MOUSE (SCY1-like protein 2 OS=Mus musculus GN=Scyl2 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 3.673e-12
Identity = 42/120 (35.00%), Postives = 68/120 (56.67%), Query Frame = 1 
Query:   25 KIDFELVTLPALFPVLSTASG-ETLLLLVKHADLIINKTSHEHLVSHVLPMLVRAYGDTDPRIQEEVLRRSVPLAKQLDVQLVKQAIVPRVQGLALKTTVAAVRVNALLCLGYLVSLLDK 381
            K ++  + LP L PV       + LL+ ++  DL++ KT  + + + VLPM+ RA      +IQE  L      A  +D   +K A++PR++   L+T+  AVRVN+L+CLG ++  LDK
Sbjct:  402 KEEYIKLILPELGPVFKQQEPIQILLIFLQKMDLLLTKTPPDEIKNSVLPMVYRALEAPSIQIQELCLNIIPTFANLIDYPSMKNALIPRIKNACLQTSSLAVRVNSLVCLGKILEYLDK 521
The following BLAST results are available for this feature:
BLAST of EY720611 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
SCYL2_HUMAN2.812e-1235.00SCY1-like protein 2 OS=Homo sapiens GN=SCYL2 PE=1 ... [more]
SCYL2_MOUSE3.673e-1235.00SCY1-like protein 2 OS=Mus musculus GN=Scyl2 PE=1 ... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-703-011-H10-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720611 ID=EY720611; Name=EY720611; organism=Citrus sinensis; type=EST; length=858bp
CCACGCGTCCGCCCACGCGTCCGCAAAATTGATTTCGAGCTAGTTACATT
GCCAGCTCTTTTCCCTGTCTTAAGTACCGCTTCTGGCGAAACACTGTTGT
TACTTGTGAAGCATGCAGACCTTATTATCAACAAGACTAGCCATGAGCAC
CTAGTATCACATGTCTTGCCCATGCTTGTTCGAGCTTATGGCGATACTGA
TCCCCGCATACAAGAGGAAGTTTTGAGAAGATCTGTGCCTCTTGCAAAGC
AACTAGATGTTCAGCTGGTGAAACAAGCCATTGTGCCTCGTGTTCAGGGC
TTAGCTCTCAAAACAACAGTGGCTGCAGTGAGAGTGAATGCTTTGCTATG
CTTGGGATATTTGGTGAGCCTACTTGATAAGCATGCTGGTTCTGGACATT
GGGCAGACAATGCAACGCTGTACTGCTGTTGATCGTGCTGCTCCTACCAG
GAGGTGTGCTCGGGGAGGGGCGAAGGGGATGCTGAACCAGGGCGGGTTGA
ATTTGCGGCGAAGGGTGTGCGTCGACGGCTGCGGTCCGCGTTGCCTGGGC
GAAAGTGACGGGGCGGTGGGGGGGGAGGGGGGGCCTGGGGGAGGGGTGTC
CGGGGTGGAGGGGAGGCGGCCGGGGGGGGCGGGCGGGGGTCGCGGAGTCG
CGCGGCGCGGCGCCGGGCAGACCAGGGGCCCCGCGGGGGATAGGGGGGAA
ATGGAGGGGGGGGGGGGGGGGGGAGGGGGCGGGGGCGGGGGCGGCGGCGG
GGCCCCGCATGGTTGGGGTGGGGTAGAGAGGGACAAGTGGATCGATGCGT
GGCGGAGGGGGGGGAGTGGGGGGGGGGGGGGGCGAGGCGGAGAGAGGGGG
CCGGCTCG
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