EY720600

Overview
NameEY720600
Unique NameEY720600
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length953
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY720600 vs. ExPASy Swiss-Prot
Match: EF1A_SOLLC (Elongation factor 1-alpha OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 2.870e-34
Identity = 66/86 (76.74%), Postives = 77/86 (89.53%), Query Frame = 2 
Query:   80 RRRLTSTLMVIGHVDSGKSTTTGHLIYKLGGIDKRVIKRFEKEAADMNDRSFKYACVLDELHAERERAITIDIVLWKFESTEYYWT 337
            + ++  +++VIGHVDSGKSTTTGHLIYKLGGIDKRVI+RFEKEAA+MN RSFKYA VLD+L AERER ITIDI LWKFE+T+YY T
Sbjct:    3 KEKIHISIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCT 88

HSP 2 Score: 29.261 bits (64), Expect = 2.870e-34
Identity = 17/41 (41.46%), Postives = 24/41 (58.54%), Query Frame = 3 
Query:  342 VEAPGRRQWRKNMITGNSTD*LEHPCSFIL---TFSGGEAG 455
            ++APG R + KNMITG S    +  C+ ++   T  G EAG
Sbjct:   90 IDAPGHRDFIKNMITGTS----QADCAVLIIDSTTGGFEAG 126
[Close]
BLAST of EY720600 vs. ExPASy Swiss-Prot
Match: EF1A2_DAUCA (Elongation factor 1-alpha OS=Daucus carota PE=2 SV=1)

HSP 1 Score: 137.887 bits (346), Expect = 2.870e-34
Identity = 66/86 (76.74%), Postives = 77/86 (89.53%), Query Frame = 2 
Query:   80 RRRLTSTLMVIGHVDSGKSTTTGHLIYKLGGIDKRVIKRFEKEAADMNDRSFKYACVLDELHAERERAITIDIVLWKFESTEYYWT 337
            + ++  +++VIGHVDSGKSTTTGHLIYKLGGIDKRVI+RFEKEAA+MN RSFKYA VLD+L AERER ITIDI LWKFE+T+YY T
Sbjct:    3 KEKIHISIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCT 88

HSP 2 Score: 29.261 bits (64), Expect = 2.870e-34
Identity = 17/41 (41.46%), Postives = 24/41 (58.54%), Query Frame = 3 
Query:  342 VEAPGRRQWRKNMITGNSTD*LEHPCSFIL---TFSGGEAG 455
            ++APG R + KNMITG S    +  C+ ++   T  G EAG
Sbjct:   90 IDAPGHRDFIKNMITGTS----QADCAVLIIDSTTGGFEAG 126
[Close]
BLAST of EY720600 vs. ExPASy Swiss-Prot
Match: EF1A_SOYBN (Elongation factor 1-alpha OS=Glycine max GN=TEFS1 PE=3 SV=2)

HSP 1 Score: 137.502 bits (345), Expect = 3.738e-34
Identity = 66/86 (76.74%), Postives = 77/86 (89.53%), Query Frame = 2 
Query:   80 RRRLTSTLMVIGHVDSGKSTTTGHLIYKLGGIDKRVIKRFEKEAADMNDRSFKYACVLDELHAERERAITIDIVLWKFESTEYYWT 337
            + ++  +++VIGHVDSGKSTTTGHLIYKLGGIDKRVI+RFEKEAA+MN RSFKYA VLD+L AERER ITIDI LWKFE+T+YY T
Sbjct:    3 KEKVHISIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCT 88

HSP 2 Score: 29.261 bits (64), Expect = 3.738e-34
Identity = 17/41 (41.46%), Postives = 24/41 (58.54%), Query Frame = 3 
Query:  342 VEAPGRRQWRKNMITGNSTD*LEHPCSFIL---TFSGGEAG 455
            ++APG R + KNMITG S    +  C+ ++   T  G EAG
Sbjct:   90 IDAPGHRDFIKNMITGTS----QADCAVLIIDSTTGGFEAG 126
[Close]
BLAST of EY720600 vs. ExPASy Swiss-Prot
Match: EF1A_WHEAT (Elongation factor 1-alpha OS=Triticum aestivum GN=TEF1 PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 4.729e-34
Identity = 66/79 (83.54%), Postives = 73/79 (92.41%), Query Frame = 2 
Query:  101 LMVIGHVDSGKSTTTGHLIYKLGGIDKRVIKRFEKEAADMNDRSFKYACVLDELHAERERAITIDIVLWKFESTEYYWT 337
            ++VIGHVDSGKSTTTGHLIYKLGGIDKRVI+RFEKEAA+MN RSFKYA VLD+L AERER ITIDI LWKFE+T+YY T
Sbjct:   10 IVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCT 88

HSP 2 Score: 29.261 bits (64), Expect = 4.729e-34
Identity = 17/41 (41.46%), Postives = 24/41 (58.54%), Query Frame = 3 
Query:  342 VEAPGRRQWRKNMITGNSTD*LEHPCSFIL---TFSGGEAG 455
            ++APG R + KNMITG S    +  C+ ++   T  G EAG
Sbjct:   90 IDAPGHRDFIKNMITGTS----QADCAVLIIDSTTGGFEAG 126

HSP 3 Score: 20.7866 bits (42), Expect = 4.729e-34
Identity = 8/8 (100.00%), Postives = 8/8 (100.00%), Query Frame = 1 
Query:   79 KEKTHINI 102
            KEKTHINI
Sbjct:    3 KEKTHINI 10
[Close]
BLAST of EY720600 vs. ExPASy Swiss-Prot
Match: EF1A_ORYSJ (Elongation factor 1-alpha OS=Oryza sativa subsp. japonica GN=REFA1 PE=2 SV=2)

HSP 1 Score: 136.732 bits (343), Expect = 4.729e-34
Identity = 66/79 (83.54%), Postives = 73/79 (92.41%), Query Frame = 2 
Query:  101 LMVIGHVDSGKSTTTGHLIYKLGGIDKRVIKRFEKEAADMNDRSFKYACVLDELHAERERAITIDIVLWKFESTEYYWT 337
            ++VIGHVDSGKSTTTGHLIYKLGGIDKRVI+RFEKEAA+MN RSFKYA VLD+L AERER ITIDI LWKFE+T+YY T
Sbjct:   10 IVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCT 88

HSP 2 Score: 29.261 bits (64), Expect = 4.729e-34
Identity = 17/41 (41.46%), Postives = 24/41 (58.54%), Query Frame = 3 
Query:  342 VEAPGRRQWRKNMITGNSTD*LEHPCSFIL---TFSGGEAG 455
            ++APG R + KNMITG S    +  C+ ++   T  G EAG
Sbjct:   90 IDAPGHRDFIKNMITGTS----QADCAVLIIDSTTGGFEAG 126

HSP 3 Score: 20.7866 bits (42), Expect = 4.729e-34
Identity = 8/8 (100.00%), Postives = 8/8 (100.00%), Query Frame = 1 
Query:   79 KEKTHINI 102
            KEKTHINI
Sbjct:    3 KEKTHINI 10
[Close]
BLAST of EY720600 vs. ExPASy Swiss-Prot
Match: EF1A_MAIZE (Elongation factor 1-alpha OS=Zea mays GN=EF1A PE=3 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 4.729e-34
Identity = 66/79 (83.54%), Postives = 73/79 (92.41%), Query Frame = 2 
Query:  101 LMVIGHVDSGKSTTTGHLIYKLGGIDKRVIKRFEKEAADMNDRSFKYACVLDELHAERERAITIDIVLWKFESTEYYWT 337
            ++VIGHVDSGKSTTTGHLIYKLGGIDKRVI+RFEKEAA+MN RSFKYA VLD+L AERER ITIDI LWKFE+T+YY T
Sbjct:   10 IVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCT 88

HSP 2 Score: 29.261 bits (64), Expect = 4.729e-34
Identity = 17/41 (41.46%), Postives = 24/41 (58.54%), Query Frame = 3 
Query:  342 VEAPGRRQWRKNMITGNSTD*LEHPCSFIL---TFSGGEAG 455
            ++APG R + KNMITG S    +  C+ ++   T  G EAG
Sbjct:   90 IDAPGHRDFIKNMITGTS----QADCAVLIIDSTTGGFEAG 126

HSP 3 Score: 20.7866 bits (42), Expect = 4.729e-34
Identity = 8/8 (100.00%), Postives = 8/8 (100.00%), Query Frame = 1 
Query:   79 KEKTHINI 102
            KEKTHINI
Sbjct:    3 KEKTHINI 10
[Close]
BLAST of EY720600 vs. ExPASy Swiss-Prot
Match: EF1A_MANES (Elongation factor 1-alpha OS=Manihot esculenta GN=EF1 PE=3 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 4.868e-34
Identity = 66/86 (76.74%), Postives = 76/86 (88.37%), Query Frame = 2 
Query:   80 RRRLTSTLMVIGHVDSGKSTTTGHLIYKLGGIDKRVIKRFEKEAADMNDRSFKYACVLDELHAERERAITIDIVLWKFESTEYYWT 337
            + ++   ++VIGHVDSGKSTTTGHLIYKLGGIDKRVI+RFEKEAA+MN RSFKYA VLD+L AERER ITIDI LWKFE+T+YY T
Sbjct:    3 KEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCT 88

HSP 2 Score: 29.261 bits (64), Expect = 4.868e-34
Identity = 17/41 (41.46%), Postives = 24/41 (58.54%), Query Frame = 3 
Query:  342 VEAPGRRQWRKNMITGNSTD*LEHPCSFIL---TFSGGEAG 455
            ++APG R + KNMITG S    +  C+ ++   T  G EAG
Sbjct:   90 IDAPGHRDFIKNMITGTS----QADCAVLIIDSTTGGFEAG 126
[Close]
BLAST of EY720600 vs. ExPASy Swiss-Prot
Match: EF1A_ARATH (Elongation factor 1-alpha OS=Arabidopsis thaliana GN=A1 PE=1 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 6.340e-34
Identity = 66/79 (83.54%), Postives = 73/79 (92.41%), Query Frame = 2 
Query:  101 LMVIGHVDSGKSTTTGHLIYKLGGIDKRVIKRFEKEAADMNDRSFKYACVLDELHAERERAITIDIVLWKFESTEYYWT 337
            ++VIGHVDSGKSTTTGHLIYKLGGIDKRVI+RFEKEAA+MN RSFKYA VLD+L AERER ITIDI LWKFE+T+YY T
Sbjct:   10 IVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCT 88

HSP 2 Score: 29.261 bits (64), Expect = 6.340e-34
Identity = 17/41 (41.46%), Postives = 24/41 (58.54%), Query Frame = 3 
Query:  342 VEAPGRRQWRKNMITGNSTD*LEHPCSFIL---TFSGGEAG 455
            ++APG R + KNMITG S    +  C+ ++   T  G EAG
Sbjct:   90 IDAPGHRDFIKNMITGTS----QADCAVLIIDSTTGGFEAG 126
[Close]
BLAST of EY720600 vs. ExPASy Swiss-Prot
Match: EF1A_TOBAC (Elongation factor 1-alpha OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 6.341e-34
Identity = 66/79 (83.54%), Postives = 73/79 (92.41%), Query Frame = 2 
Query:  101 LMVIGHVDSGKSTTTGHLIYKLGGIDKRVIKRFEKEAADMNDRSFKYACVLDELHAERERAITIDIVLWKFESTEYYWT 337
            ++VIGHVDSGKSTTTGHLIYKLGGIDKRVI+RFEKEAA+MN RSFKYA VLD+L AERER ITIDI LWKFE+T+YY T
Sbjct:   10 IVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETTKYYCT 88

HSP 2 Score: 29.261 bits (64), Expect = 6.341e-34
Identity = 17/41 (41.46%), Postives = 24/41 (58.54%), Query Frame = 3 
Query:  342 VEAPGRRQWRKNMITGNSTD*LEHPCSFIL---TFSGGEAG 455
            ++APG R + KNMITG S    +  C+ ++   T  G EAG
Sbjct:   90 IDAPGHRDFIKNMITGTS----QADCAVLIIDSTTGGFEAG 126
[Close]
BLAST of EY720600 vs. ExPASy Swiss-Prot
Match: EF1A_VICFA (Elongation factor 1-alpha OS=Vicia faba PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 1.401e-33
Identity = 65/86 (75.58%), Postives = 76/86 (88.37%), Query Frame = 2 
Query:   80 RRRLTSTLMVIGHVDSGKSTTTGHLIYKLGGIDKRVIKRFEKEAADMNDRSFKYACVLDELHAERERAITIDIVLWKFESTEYYWT 337
            + ++   ++VIGHVDSGKSTTTGHLIYKLGGIDKRVI+RFEKEAA+MN RSFKYA VLD+L AERER ITIDI LWKFE+++YY T
Sbjct:    3 KEKVHINIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERERGITIDIALWKFETSKYYCT 88

HSP 2 Score: 29.261 bits (64), Expect = 1.401e-33
Identity = 17/41 (41.46%), Postives = 24/41 (58.54%), Query Frame = 3 
Query:  342 VEAPGRRQWRKNMITGNSTD*LEHPCSFIL---TFSGGEAG 455
            ++APG R + KNMITG S    +  C+ ++   T  G EAG
Sbjct:   90 IDAPGHRDFIKNMITGTS----QADCAVLIIDSTTGGFEAG 126
The following BLAST results are available for this feature:
BLAST of EY720600 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 158
Match NameE-valueIdentityDescription
EF1A_SOLLC2.870e-3476.74Elongation factor 1-alpha OS=Solanum lycopersicum ... [more]
EF1A2_DAUCA2.870e-3476.74Elongation factor 1-alpha OS=Daucus carota PE=2 SV... [more]
EF1A_SOYBN3.738e-3476.74Elongation factor 1-alpha OS=Glycine max GN=TEFS1 ... [more]
EF1A_WHEAT4.729e-3483.54Elongation factor 1-alpha OS=Triticum aestivum GN=... [more]
EF1A_ORYSJ4.729e-3483.54Elongation factor 1-alpha OS=Oryza sativa subsp. j... [more]
EF1A_MAIZE4.729e-3483.54Elongation factor 1-alpha OS=Zea mays GN=EF1A PE=3... [more]
EF1A_MANES4.868e-3476.74Elongation factor 1-alpha OS=Manihot esculenta GN=... [more]
EF1A_ARATH6.340e-3483.54Elongation factor 1-alpha OS=Arabidopsis thaliana ... [more]
EF1A_TOBAC6.341e-3483.54Elongation factor 1-alpha OS=Nicotiana tabacum PE=... [more]
EF1A_VICFA1.401e-3375.58Elongation factor 1-alpha OS=Vicia faba PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-011-G02-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720600 ID=EY720600; Name=EY720600; organism=Citrus sinensis; type=EST; length=953bp
CACGCGTCCGGCGGCGAGAGAGAACCATTTTCGCGAATATCATTTTAATA
AGGTTTTTTCTAGATGGGCATGATGGGTAAGGAGAAGACTCACATCAACA
TTGATGGTCATCGGCCATGTCGACTCTGGAAAGTCGACCACCACCGGACA
CTTGATCTACAAGCTTGGTGGTATTGACAAGCGTGTGATCAAGAGGTTCG
AAAAGGAAGCTGCTGATATGAACGATAGGTCATTCAAATACGCCTGCGTG
CTCGACGAGCTCCATGCTGAGCGTGAACGTGCTATTACCATTGATATTGT
CTTGTGGAAGTTCGAGAGCACCGAGTACTACTGGACGCGGCGTTGAGGCT
CCTGGACGTCGGCAGTGGAGGAAGAACATGATTACCGGTAACTCAACAGA
CTGACTGGAACATCCTTGTTCGTTTATTCTTACTTTCAGTGGTGGGGAAG
CGGGGGACAGGGAGGGATGGAGGCGAGCGTGGAGGGTGTGGGTTGGCGCG
TCGGTGATGGGGGGGAGCGTGTCGTTGCGCGGGGGGGGGGCAGGGTGGGG
GCCCGCGGAGGTGGGCGGGGGTGGGGGGGCGGAGCGGTGGCGGGCCGGGC
GGGGGCGGATGCCGGGCGGGGGGGCGGGGGTCCTGGGGGGGCGGGGGAGG
AGGGGGGGTGGGTGGGGGAGGGAGCGCGGGGGGGGGGGGGGTGGCGGTGG
GCGGGGGAGGGTGGTGGGGGAGAGTGGGGGGCGGGCGGTGGCGGAGGCAC
GGAGAGGGGGAGAGGGACGGTGAGGCGAGGTGGGTTTGAGTGGGAGGGCC
GCGTGGCGGGGGAGGGTTCGCAGGGGGGGCGGTGGGTGGGAGAGGGGGGG
TTGCGTTGAGAGGGAGGAGGGTGGAGGGAGGGGGGTGGGGGGGATGGGGG
TGAGGGGGGCGAGGCGGGGAGGCGGCGGGGGGTGGGGTGCGGGGGGGCGG
GGG
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