EY720595

Overview
NameEY720595
Unique NameEY720595
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length894
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720595 vs. ExPASy Swiss-Prot
Match: RL5_CUCSA (60S ribosomal protein L5 OS=Cucumis sativus GN=RPL5 PE=2 SV=1)

HSP 1 Score: 333.569 bits (854), Expect = 9.987e-92
Identity = 163/182 (89.56%), Postives = 175/182 (96.15%), Query Frame = 1
Query:   55 MAFVKAQKSKAYFKRFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADTRRPFRALLDVGLIRTTTGNRVFGALKGASDGGLDLPHTDKRFAGF 600
            MAF KAQK+KAYFKR+QVK+KRRREGKTDYRARIRLINQDKNKYNTPKYRFVVR +NKDI AQI+SA+I GD VLA+AY+HELP+YGLEVGLTNYAAAYCTGLLLARRVLKMLEMD EYEGNVEATGEDYSVEPADTRRPFRALLDVGLIRTTTGNRVFGALKGA DGGLD+PH+DKRFAG+
Sbjct:    1 MAFAKAQKTKAYFKRYQVKFKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRTSNKDITAQIISASIAGDLVLASAYSHELPQYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDAEYEGNVEATGEDYSVEPADTRRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFAGY 182          

HSP 2 Score: 24.6386 bits (52), Expect = 9.987e-92
Identity = 8/21 (38.10%), Postives = 17/21 (80.95%), Query Frame = 2
Query:  596 GFS*DGKRVDAEGYAQYIYGG 658
            G++ +G+++D E + +YI+GG
Sbjct:  181 GYAKNGQQLDVEVHRKYIFGG 201          
BLAST of EY720595 vs. ExPASy Swiss-Prot
Match: RL52_ARATH (60S ribosomal protein L5-2 OS=Arabidopsis thaliana GN=RPL5B PE=2 SV=3)

HSP 1 Score: 330.102 bits (845), Expect = 2.217e-91
Identity = 160/182 (87.91%), Postives = 173/182 (95.05%), Query Frame = 1
Query:   55 MAFVKAQKSKAYFKRFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADTRRPFRALLDVGLIRTTTGNRVFGALKGASDGGLDLPHTDKRFAGF 600
            M FVK+ KS AYFKR+QVK++RRR+GKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI+AQIVSA+I GD V A+AYAHELP+YGL VGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGED+SVEP D+RRPFRALLDVGLIRTTTGNRVFGALKGA DGGLD+PH+DKRFAGF
Sbjct:    1 MVFVKSSKSNAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIVAQIVSASIAGDIVKASAYAHELPQYGLTVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDFSVEPTDSRRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFAGF 182          

HSP 2 Score: 26.9498 bits (58), Expect = 2.217e-91
Identity = 11/21 (52.38%), Postives = 15/21 (71.43%), Query Frame = 2
Query:  596 GFS*DGKRVDAEGYAQYIYGG 658
            GF  + K++DAE +  YIYGG
Sbjct:  181 GFHKENKQLDAEIHRNYIYGG 201          
BLAST of EY720595 vs. ExPASy Swiss-Prot
Match: RL51_ARATH (60S ribosomal protein L5-1 OS=Arabidopsis thaliana GN=ATL5 PE=2 SV=2)

HSP 1 Score: 329.717 bits (844), Expect = 2.892e-91
Identity = 160/182 (87.91%), Postives = 173/182 (95.05%), Query Frame = 1
Query:   55 MAFVKAQKSKAYFKRFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADTRRPFRALLDVGLIRTTTGNRVFGALKGASDGGLDLPHTDKRFAGF 600
            M FVK+ KS AYFKR+QVK++RRR+GKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDI+AQIVSA+I GD V A+AYAHELP+YGL VGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGED+SVEP D+RRPFRALLDVGLIRTTTGNRVFGALKGA DGGLD+PH+DKRFAGF
Sbjct:    1 MVFVKSTKSNAYFKRYQVKFRRRRDGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIVAQIVSASIAGDIVKASAYAHELPQYGLTVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDFSVEPTDSRRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFAGF 182          

HSP 2 Score: 26.9498 bits (58), Expect = 2.892e-91
Identity = 11/21 (52.38%), Postives = 15/21 (71.43%), Query Frame = 2
Query:  596 GFS*DGKRVDAEGYAQYIYGG 658
            GF  + K++DAE +  YIYGG
Sbjct:  181 GFHKENKQLDAEIHRNYIYGG 201          
BLAST of EY720595 vs. ExPASy Swiss-Prot
Match: RL51_ORYSI (60S ribosomal protein L5-1 OS=Oryza sativa subsp. indica GN=RPL5A PE=2 SV=2)

HSP 1 Score: 318.931 bits (816), Expect = 8.405e-88
Identity = 155/180 (86.11%), Postives = 166/180 (92.22%), Query Frame = 1
Query:   61 FVKAQKSKAYFKRFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADTRRPFRALLDVGLIRTTTGNRVFGALKGASDGGLDLPHTDKRFAGF 600
            FVK QK+ AY+KRFQVK+KRRR+GKTDYRARIRL NQDKNKYNTPKYRFVVRFTNKDI AQIV A I GD V+AAAY+HELPRYGLEVGLTNYAAAYCTGLLLARRVLK+  +D EYEGN+EATGEDY VEPAD RRPFRALLDVGLIRTTTGNRVFGALKGA DGGLD+PH+DKRFAGF
Sbjct:    4 FVKTQKTNAYYKRFQVKFKRRRQGKTDYRARIRLTNQDKNKYNTPKYRFVVRFTNKDITAQIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKLRGLDQEYEGNIEATGEDYYVEPADERRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFAGF 183          

HSP 2 Score: 26.1794 bits (56), Expect = 8.405e-88
Identity = 10/21 (47.62%), Postives = 16/21 (76.19%), Query Frame = 2
Query:  596 GFS*DGKRVDAEGYAQYIYGG 658
            GF  D K++D++ + +YIYGG
Sbjct:  182 GFKKDEKQLDSDIHRKYIYGG 202          
BLAST of EY720595 vs. ExPASy Swiss-Prot
Match: RL51_ORYSJ (60S ribosomal protein L5-1 OS=Oryza sativa subsp. japonica GN=RPL5A PE=2 SV=1)

HSP 1 Score: 317.39 bits (812), Expect = 2.434e-87
Identity = 155/180 (86.11%), Postives = 165/180 (91.67%), Query Frame = 1
Query:   61 FVKAQKSKAYFKRFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADTRRPFRALLDVGLIRTTTGNRVFGALKGASDGGLDLPHTDKRFAGF 600
            FVK QK+ AY KRFQVK+KRRR+GKTDYRARIRL NQDKNKYNTPKYRFVVRFTNKDI AQIV A I GD V+AAAY+HELPRYGLEVGLTNYAAAYCTGLLLARRVLK+  +D EYEGN+EATGEDY VEPAD RRPFRALLDVGLIRTTTGNRVFGALKGA DGGLD+PH+DKRFAGF
Sbjct:    4 FVKTQKTNAYHKRFQVKFKRRRQGKTDYRARIRLTNQDKNKYNTPKYRFVVRFTNKDITAQIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLKLRGLDQEYEGNIEATGEDYYVEPADERRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFAGF 183          

HSP 2 Score: 26.1794 bits (56), Expect = 2.434e-87
Identity = 10/21 (47.62%), Postives = 16/21 (76.19%), Query Frame = 2
Query:  596 GFS*DGKRVDAEGYAQYIYGG 658
            GF  D K++D++ + +YIYGG
Sbjct:  182 GFKKDEKQLDSDIHRKYIYGG 202          
BLAST of EY720595 vs. ExPASy Swiss-Prot
Match: RL52_ORYSJ (60S ribosomal protein L5-2 OS=Oryza sativa subsp. japonica GN=RPL5B PE=3 SV=1)

HSP 1 Score: 306.605 bits (784), Expect = 4.151e-84
Identity = 153/180 (85.00%), Postives = 162/180 (90.00%), Query Frame = 1
Query:   61 FVKAQKSKAYFKRFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADTRRPFRALLDVGLIRTTTGNRVFGALKGASDGGLDLPHTDKRFAGF 600
            FVK QK+ AYFKRFQVK+KRRR+GKTDYRARIRL NQDKNKYNTPKYRFV   TNKDI AQIV A I GD V+AAAY+HELPRYGLEVGLTNYAAAYCTGLLLARRVL +  +D EYEGNVEATGEDY VEPAD RRPFRALLDVGLIRTTTGNRVFGALKGA DGGLD+PH+DKRFAGF
Sbjct:    7 FVKTQKTHAYFKRFQVKFKRRRQGKTDYRARIRLTNQDKNKYNTPKYRFV---TNKDITAQIVYATIAGDIVMAAAYSHELPRYGLEVGLTNYAAAYCTGLLLARRVLTLRGLDQEYEGNVEATGEDYYVEPADERRPFRALLDVGLIRTTTGNRVFGALKGALDGGLDIPHSDKRFAGF 183          

HSP 2 Score: 26.1794 bits (56), Expect = 4.151e-84
Identity = 10/21 (47.62%), Postives = 16/21 (76.19%), Query Frame = 2
Query:  596 GFS*DGKRVDAEGYAQYIYGG 658
            GF  D K++D++ + +YIYGG
Sbjct:  182 GFKKDEKQLDSDIHRKYIYGG 202          
BLAST of EY720595 vs. ExPASy Swiss-Prot
Match: RL5_SUBDO (60S ribosomal protein L5 OS=Suberites domuncula GN=RPL5 PE=2 SV=1)

HSP 1 Score: 262.307 bits (669), Expect = 1.427e-69
Identity = 128/183 (69.95%), Postives = 149/183 (81.42%), Query Frame = 1
Query:   55 MAFVKAQKSKAYFKRFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVE-PADTRRPFRALLDVGLIRTTTGNRVFGALKGASDGGLDLPHTDKRFAGF 600
            M FVK  K+KAYFKR+QVK++RRREGKTDYRAR RL+ QDKNKYNTPKYR V+RFTN DII QI+ A I GD VL +AYAHELPRYG++VGLTNYAAAYCTGLLLARR+L  L + D+Y G  +  GED++VE   D  RPFRA LDVGL RTTTGNRVF A+KGA DGG+D+PH+  RF G+
Sbjct:    1 MPFVKVIKNKAYFKRYQVKFRRRREGKTDYRARKRLVVQDKNKYNTPKYRIVIRFTNTDIICQIIYAKIEGDKVLVSAYAHELPRYGVKVGLTNYAAAYCTGLLLARRLLTNLGLADKYAGQTDIDGEDFNVEHMGDGPRPFRAFLDVGLTRTTTGNRVFAAMKGAVDGGIDIPHSPSRFVGY 183          

HSP 2 Score: 21.9422 bits (45), Expect = 1.427e-69
Identity = 7/22 (31.82%), Postives = 15/22 (68.18%), Query Frame = 2
Query:  593 LGFS*DGKRVDAEGYAQYIYGG 658
            +G+  +  +++A+   QYI+GG
Sbjct:  181 VGYDEESSQLEADKLRQYIFGG 202          
BLAST of EY720595 vs. ExPASy Swiss-Prot
Match: RL5_STYCL (60S ribosomal protein L5 OS=Styela clava GN=RPL5 PE=3 SV=3)

HSP 1 Score: 257.299 bits (656), Expect = 8.619e-68
Identity = 125/183 (68.31%), Postives = 148/183 (80.87%), Query Frame = 1
Query:   55 MAFVKAQKSKAYFKRFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADTR-RPFRALLDVGLIRTTTGNRVFGALKGASDGGLDLPHTDKRFAGF 600
            M FVK  K+KAYFKR+QVKYKRRR+GKTDY AR RL+ QDKNKYNTPKYR +VRFTNKDI+ QI  A I GD V+ AAYAHELPRYG++VGLTNYAAAYCTGLLL+RR+L    +D+ YEG  E  G+++ VE  D +   FRA LDVGL RTTTG +VFGA+KGA+DGGLD+PH+ KRF G+
Sbjct:    1 MGFVKVVKNKAYFKRYQVKYKRRRQGKTDYFARKRLVVQDKNKYNTPKYRMIVRFTNKDIVCQIAYARIEGDVVICAAYAHELPRYGVKVGLTNYAAAYCTGLLLSRRLLNKFGLDEIYEGQTEIDGDEFYVEDVDGKPGAFRAFLDVGLARTTTGAKVFGAMKGAADGGLDIPHSTKRFPGY 183          
BLAST of EY720595 vs. ExPASy Swiss-Prot
Match: RL5_HUMAN (60S ribosomal protein L5 OS=Homo sapiens GN=RPL5 PE=1 SV=3)

HSP 1 Score: 253.062 bits (645), Expect = 1.625e-66
Identity = 124/183 (67.76%), Postives = 145/183 (79.23%), Query Frame = 1
Query:   55 MAFVKAQKSKAYFKRFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADTR-RPFRALLDVGLIRTTTGNRVFGALKGASDGGLDLPHTDKRFAGF 600
            M FVK  K+KAYFKR+QVK++RRREGKTDY AR RL+ QDKNKYNTPKYR +VR TN+DII QI  A I GD ++ AAYAHELP+YG++VGLTNYAAAYCTGLLLARR+L    MD  YEG VE TG++Y+VE  D +   F   LD GL RTTTGN+VFGALKGA DGGL +PH+ KRF G+
Sbjct:    1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGY 183          
BLAST of EY720595 vs. ExPASy Swiss-Prot
Match: RL5_BOVIN (60S ribosomal protein L5 OS=Bos taurus GN=RPL5 PE=2 SV=3)

HSP 1 Score: 253.062 bits (645), Expect = 1.625e-66
Identity = 124/183 (67.76%), Postives = 145/183 (79.23%), Query Frame = 1
Query:   55 MAFVKAQKSKAYFKRFQVKYKRRREGKTDYRARIRLINQDKNKYNTPKYRFVVRFTNKDIIAQIVSANIVGDSVLAAAYAHELPRYGLEVGLTNYAAAYCTGLLLARRVLKMLEMDDEYEGNVEATGEDYSVEPADTR-RPFRALLDVGLIRTTTGNRVFGALKGASDGGLDLPHTDKRFAGF 600
            M FVK  K+KAYFKR+QVK++RRREGKTDY AR RL+ QDKNKYNTPKYR +VR TN+DII QI  A I GD ++ AAYAHELP+YG++VGLTNYAAAYCTGLLLARR+L    MD  YEG VE TG++Y+VE  D +   F   LD GL RTTTGN+VFGALKGA DGGL +PH+ KRF G+
Sbjct:    1 MGFVKVVKNKAYFKRYQVKFRRRREGKTDYYARKRLVIQDKNKYNTPKYRMIVRVTNRDIICQIAYARIEGDMIVCAAYAHELPKYGVKVGLTNYAAAYCTGLLLARRLLNRFGMDKIYEGQVEVTGDEYNVESIDGQPGAFTCYLDAGLARTTTGNKVFGALKGAVDGGLSIPHSTKRFPGY 183          
The following BLAST results are available for this feature:
BLAST of EY720595 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 99
Match NameE-valueIdentityDescription
RL5_CUCSA9.987e-9289.5660S ribosomal protein L5 OS=Cucumis sativus GN=RPL... [more]
RL52_ARATH2.217e-9187.9160S ribosomal protein L5-2 OS=Arabidopsis thaliana... [more]
RL51_ARATH2.892e-9187.9160S ribosomal protein L5-1 OS=Arabidopsis thaliana... [more]
RL51_ORYSI8.405e-8886.1160S ribosomal protein L5-1 OS=Oryza sativa subsp. ... [more]
RL51_ORYSJ2.434e-8786.1160S ribosomal protein L5-1 OS=Oryza sativa subsp. ... [more]
RL52_ORYSJ4.151e-8485.0060S ribosomal protein L5-2 OS=Oryza sativa subsp. ... [more]
RL5_SUBDO1.427e-6969.9560S ribosomal protein L5 OS=Suberites domuncula GN... [more]
RL5_STYCL8.619e-6868.3160S ribosomal protein L5 OS=Styela clava GN=RPL5 P... [more]
RL5_HUMAN1.625e-6667.7660S ribosomal protein L5 OS=Homo sapiens GN=RPL5 P... [more]
RL5_BOVIN1.625e-6667.7660S ribosomal protein L5 OS=Bos taurus GN=RPL5 PE=... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-011-F09-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720595 ID=EY720595; Name=EY720595; organism=Citrus sinensis; type=EST; length=894bp
CCACGCGTCCGCTCCTTCCCTCTCCTTTTCACTTACAACTCGAAAGTTCG
AGCAATGGCCTTTGTCAAGGCTCAGAAATCCAAGGCTTACTTCAAGCGGT
TCCAGGTTAAGTACAAGAGAAGAAGAGAGGGAAAGACTGATTACAGAGCT
AGAATTCGCTTGATTAATCAGGACAAGAATAAGTACAACACACCCAAGTA
CCGATTTGTTGTCCGATTCACAAACAAGGACATCATTGCACAGATAGTGT
CAGCCAACATTGTTGGTGATTCTGTCCTTGCTGCTGCTTATGCCCATGAG
CTTCCTCGTTATGGACTTGAAGTAGGTCTTACAAACTATGCTGCAGCTTA
TTGCACTGGGCTTCTTTTGGCTCGTCGTGTCTTGAAGATGCTTGAAATGG
ATGATGAGTATGAGGGCAATGTTGAGGCTACTGGAGAGGATTACTCTGTC
GAACCAGCTGATACAAGGAGGCCATTCCGTGCTCTCCTTGATGTTGGGCT
CATCAGAACGACAACTGGAAACCGTGTCTTTGGTGCTCTGAAGGGAGCAT
CAGATGGTGGATTGGACCTTCCTCATACTGACAAGAGGTTTGCTGGGTTT
TTCATAGGACGGCAAGCGAGTGGATGCTGAGGGTTACGCCCAGTATATCT
ATGGTGGGACCTGTGGGTGGTGACGGGATTACCTGGGCGGGCGGACGGGC
CGGAGGGTGTCGGTCGGCGGGCGGTGGGGGTCTTCCCACAGGACGGGAGG
CCTGCGCCGGTGGAGCGGCCGCGCGCATACGGGTCGTGCGGGGGCGCGGG
CGGGTCGACGCCCGAGAGCTCCGGGCAGGCCTCCCCCCCGCACCTCCGCC
CTCCACCTTGGTTCGAGTGTTGGGGGGAGAGGGGGGGGGGTGGT
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