EY720590

Overview
NameEY720590
Unique NameEY720590
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length907
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720590 vs. ExPASy Swiss-Prot
Match: CDKE1_ARATH (Cyclin-dependent kinase E-1 OS=Arabidopsis thaliana GN=CDKE-1 PE=2 SV=2)

HSP 1 Score: 313.923 bits (803), Expect = 7.887e-85
Identity = 161/241 (66.80%), Postives = 183/241 (75.93%), Query Frame = 3
Query:   12 FDYAEYDLYEIIRHHRDKVNHTMNPYTVKSILWQLLNGLNYLHSNWIIHRDLKPSNILVMGEGEEQGVVKIADFGLARIYQAPLKFLSENGVVVTIWYRAPELLLGAKHYTSAVDMWAVGCMFAELLTLKPLFQGA*AKSTQNPFHLDQLDNIFKY*GIQHRERWRSLASLPRWRAD-SCICRDALES*GAEKVGSPWAKSPGV*PLSKNVQDDPREXXXXXXXWGR*WCGIRPVPGADPF 731
            FDYAEYDLYEIIRHHRDKV H++N YTVKS+LWQLLNGLNYLHSNWIIHRDLKPSNILVMG+ EE G+VKIADFGLARIYQAPLK LS+NGVVVTIWYRAPELLLG+KHYTSAVDMWAVGC+FAELLTLKPLFQGA AKS+QNPF LDQLD IFK  G    ++W +L +LP W+ D   I     +S G   V     KSP    LSK ++ DP +           +  + P+PG + F
Sbjct:  104 FDYAEYDLYEIIRHHRDKVGHSLNTYTVKSLLWQLLNGLNYLHSNWIIHRDLKPSNILVMGDAEEHGIVKIADFGLARIYQAPLKPLSDNGVVVTIWYRAPELLLGSKHYTSAVDMWAVGCIFAELLTLKPLFQGAEAKSSQNPFQLDQLDKIFKILGHPTMDKWPTLVNLPHWQNDVQHIQAHKYDSVGLHNVVHLNQKSPAYDLLSKMLEYDPLKRITASQALEHEYFRMDPLPGRNAF 344          
BLAST of EY720590 vs. ExPASy Swiss-Prot
Match: CDKE1_ORYSJ (Cyclin-dependent kinase E-1 OS=Oryza sativa subsp. japonica GN=CDKE-1 PE=2 SV=2)

HSP 1 Score: 311.997 bits (798), Expect = 2.997e-84
Identity = 161/247 (65.18%), Postives = 185/247 (74.90%), Query Frame = 3
Query:   12 FDYAEYDLYEIIRHHRDKVNHTMNPYTVKSILWQLLNGLNYLHSNWIIHRDLKPSNILVMGEGEEQGVVKIADFGLARIYQAPLKFLSENGVVVTIWYRAPELLLGAKHYTSAVDMWAVGCMFAELLTLKPLFQGA*AKSTQNPFHLDQLDNIFKY*GIQHRERWRSLASLPRWRAD-SCICRDALES*GAEKVGSPWAKSPGV*PLSKNVQDDPREXXXXXXXWGR*WCGIRPVPGADPFFVASLG 749
            FDYAE+DLYEIIRHHR+K+N  +NPYTVKS+LWQLLNGLNYLHSNWIIHRDLKPSNILVMGEGEE G++KIADFGLARIYQAPLK LS+NGVVVTIWYRAPELLLGAKHYTSAVDMWAVGC+FAELLTLKPLFQG  AK+T NPF LDQLD IFK  G    E+W +LA+LP W+ D   I     E+ G   +     KSP    LSK ++ DPR+           +  + P+PG +    +  G
Sbjct:  108 FDYAEHDLYEIIRHHREKLNLPINPYTVKSLLWQLLNGLNYLHSNWIIHRDLKPSNILVMGEGEEHGIIKIADFGLARIYQAPLKPLSDNGVVVTIWYRAPELLLGAKHYTSAVDMWAVGCIFAELLTLKPLFQGVEAKATPNPFQLDQLDKIFKVLGHPTVEKWPTLANLPCWQNDQQHIQGHKYENTGLHNIVHLPQKSPAFDLLSKMLEYDPRKRITAAQALEHEYFRMDPLPGRNALLPSQAG 354          
BLAST of EY720590 vs. ExPASy Swiss-Prot
Match: CDK8_DICDI (Probable cyclin-dependent kinase 8 OS=Dictyostelium discoideum GN=cdk8 PE=2 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 1.656e-58
Identity = 108/177 (61.02%), Postives = 139/177 (78.53%), Query Frame = 3
Query:   12 FDYAEYDLYEIIRHHRDKVNHTMNPYTVKSILWQLLNGLNYLHSNWIIHRDLKPSNILVMGEGEEQGVVKIADFGLARIYQAPLKFLSENGVVVTIWYRAPELLLGAKHYTSAVDMWAVGCMFAELLTLKPLFQGA*AKSTQNP--FHLDQLDNIFKY*GIQHRERWRSLASLPRWR 536
            FDYAE+DL+ II++HR+  +H  +  T+KS++WQ+LNG++YLHSNW+IHRDLKPSNILVMGEG+E G VKI DFGLARI+Q+PLK L+ENGVVVTIWYR+PELLLG+KHYT AVD+WA+GC+FAEL+T KPLF G   K  + P  F  DQ++ I +  G    + W  +  LP W+
Sbjct:  123 FDYAEFDLFGIIKYHRENGSH-FSDATIKSLIWQVLNGIHYLHSNWVIHRDLKPSNILVMGEGKECGTVKIGDFGLARIFQSPLKPLNENGVVVTIWYRSPELLLGSKHYTRAVDIWAIGCIFAELITTKPLFPGK-EKDPKIPSLFQDDQVEKIIRVLGKPTLDMWPDIKHLPEWK 297          
BLAST of EY720590 vs. ExPASy Swiss-Prot
Match: CDK8_AEDAE (Cell division protein kinase 8 OS=Aedes aegypti GN=Cdk8 PE=3 SV=2)

HSP 1 Score: 201.06 bits (510), Expect = 7.451e-51
Identity = 100/179 (55.87%), Postives = 129/179 (72.07%), Query Frame = 3
Query:   12 FDYAEYDLYEIIRHHRDKVNHTMNPYTV-----KSILWQLLNGLNYLHSNWIIHRDLKPSNILVMGEGEEQGVVKIADFGLARIYQAPLKFLSE-NGVVVTIWYRAPELLLGAKHYTSAVDMWAVGCMFAELLTLKPLFQGA*AK-STQNPFHLDQLDNIFKY*GIQHRERWRSLASLP 527
            FDYAE+DL+ II+ HR     T  P  V     KS+L+Q+L+G++YLHSNW++HRDLKP+NILVMGEG E+G VKIAD G AR++ APLK L++ + VVVT WYRAPELLLGA+HYT A+D+WA+GC+FAELLT +P+F        T NP+H DQLD IF   G    + W  +  +P
Sbjct:   97 FDYAEHDLWHIIKFHR-AAKATKKPVMVPKGMVKSLLYQILDGIHYLHSNWVLHRDLKPANILVMGEGNERGRVKIADMGFARLFNAPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPQDKDWEDIRKMP 274          
BLAST of EY720590 vs. ExPASy Swiss-Prot
Match: CDK19_MOUSE (Cell division protein kinase 19 OS=Mus musculus GN=Cdk19 PE=2 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.660e-50
Identity = 98/180 (54.44%), Postives = 131/180 (72.78%), Query Frame = 3
Query:   12 FDYAEYDLYEIIRHHR----DKVNHTMNPYTVKSILWQLLNGLNYLHSNWIIHRDLKPSNILVMGEGEEQGVVKIADFGLARIYQAPLKFLSE-NGVVVTIWYRAPELLLGAKHYTSAVDMWAVGCMFAELLTLKPLFQGA*AK-STQNPFHLDQLDNIFKY*GIQHRERWRSLASLPRW 533
            FDYAE+DL+ II+ HR    +K    +    VKS+L+Q+L+G++YLH+NW++HRDLKP+NILVMGEG E+G VKIAD G AR++ +PLK L++ + VVVT WYRAPELLLGA+HYT A+D+WA+GC+FAELLT +P+F        T NPFH DQLD IF   G    + W  +  +P +
Sbjct:   97 FDYAEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMGFPADKDWEDIRKMPEY 276          
BLAST of EY720590 vs. ExPASy Swiss-Prot
Match: CDK19_HUMAN (Cell division protein kinase 19 OS=Homo sapiens GN=CDK19 PE=1 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.660e-50
Identity = 98/180 (54.44%), Postives = 131/180 (72.78%), Query Frame = 3
Query:   12 FDYAEYDLYEIIRHHR----DKVNHTMNPYTVKSILWQLLNGLNYLHSNWIIHRDLKPSNILVMGEGEEQGVVKIADFGLARIYQAPLKFLSE-NGVVVTIWYRAPELLLGAKHYTSAVDMWAVGCMFAELLTLKPLFQGA*AK-STQNPFHLDQLDNIFKY*GIQHRERWRSLASLPRW 533
            FDYAE+DL+ II+ HR    +K    +    VKS+L+Q+L+G++YLH+NW++HRDLKP+NILVMGEG E+G VKIAD G AR++ +PLK L++ + VVVT WYRAPELLLGA+HYT A+D+WA+GC+FAELLT +P+F        T NPFH DQLD IF   G    + W  +  +P +
Sbjct:   97 FDYAEHDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMGFPADKDWEDIRKMPEY 276          
BLAST of EY720590 vs. ExPASy Swiss-Prot
Match: CDK8_MOUSE (Cell division protein kinase 8 OS=Mus musculus GN=Cdk8 PE=2 SV=3)

HSP 1 Score: 197.208 bits (500), Expect = 1.076e-49
Identity = 97/178 (54.49%), Postives = 130/178 (73.03%), Query Frame = 3
Query:   12 FDYAEYDLYEIIRHHR----DKVNHTMNPYTVKSILWQLLNGLNYLHSNWIIHRDLKPSNILVMGEGEEQGVVKIADFGLARIYQAPLKFLSE-NGVVVTIWYRAPELLLGAKHYTSAVDMWAVGCMFAELLTLKPLFQGA*AK-STQNPFHLDQLDNIFKY*GIQHRERWRSLASLP 527
            FDYAE+DL+ II+ HR    +K    +    VKS+L+Q+L+G++YLH+NW++HRDLKP+NILVMGEG E+G VKIAD G AR++ +PLK L++ + VVVT WYRAPELLLGA+HYT A+D+WA+GC+FAELLT +P+F        T NP+H DQLD IF   G    + W  +  +P
Sbjct:   97 FDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMP 274          
BLAST of EY720590 vs. ExPASy Swiss-Prot
Match: CDK8_HUMAN (Cell division protein kinase 8 OS=Homo sapiens GN=CDK8 PE=1 SV=1)

HSP 1 Score: 197.208 bits (500), Expect = 1.076e-49
Identity = 97/178 (54.49%), Postives = 130/178 (73.03%), Query Frame = 3
Query:   12 FDYAEYDLYEIIRHHR----DKVNHTMNPYTVKSILWQLLNGLNYLHSNWIIHRDLKPSNILVMGEGEEQGVVKIADFGLARIYQAPLKFLSE-NGVVVTIWYRAPELLLGAKHYTSAVDMWAVGCMFAELLTLKPLFQGA*AK-STQNPFHLDQLDNIFKY*GIQHRERWRSLASLP 527
            FDYAE+DL+ II+ HR    +K    +    VKS+L+Q+L+G++YLH+NW++HRDLKP+NILVMGEG E+G VKIAD G AR++ +PLK L++ + VVVT WYRAPELLLGA+HYT A+D+WA+GC+FAELLT +P+F        T NP+H DQLD IF   G    + W  +  +P
Sbjct:   97 FDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMP 274          
BLAST of EY720590 vs. ExPASy Swiss-Prot
Match: CDK8_DROME (Cell division protein kinase 8 OS=Drosophila melanogaster GN=Cdk8 PE=1 SV=2)

HSP 1 Score: 197.208 bits (500), Expect = 1.076e-49
Identity = 97/177 (54.80%), Postives = 128/177 (72.32%), Query Frame = 3
Query:   15 DYAEYDLYEIIRHHR----DKVNHTMNPYTVKSILWQLLNGLNYLHSNWIIHRDLKPSNILVMGEGEEQGVVKIADFGLARIYQAPLKFLSE-NGVVVTIWYRAPELLLGAKHYTSAVDMWAVGCMFAELLTLKPLFQGA*AK-STQNPFHLDQLDNIFKY*GIQHRERWRSLASLP 527
            DYAE+DL+ II+ HR     K    +    VKS+L+Q+L+G++YLHSNW++HRDLKP+NILVMG+G E+G VKIAD G AR++ APLK L++ + VVVT WYRAPELLLGA+HYT A+D+WA+GC+FAELLT +P+F        T NP+H DQLD IF   G    + W  +  +P
Sbjct:   98 DYAEHDLWHIIKFHRAAKATKKQVVVPRGMVKSLLYQILDGIHYLHSNWVLHRDLKPANILVMGDGNERGRVKIADMGFARLFNAPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPQDKDWEDIKKMP 274          
BLAST of EY720590 vs. ExPASy Swiss-Prot
Match: CDK8_XENTR (Cell division protein kinase 8 OS=Xenopus tropicalis GN=cdk8 PE=2 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 3.131e-49
Identity = 96/178 (53.93%), Postives = 130/178 (73.03%), Query Frame = 3
Query:   12 FDYAEYDLYEIIRHHR----DKVNHTMNPYTVKSILWQLLNGLNYLHSNWIIHRDLKPSNILVMGEGEEQGVVKIADFGLARIYQAPLKFLSE-NGVVVTIWYRAPELLLGAKHYTSAVDMWAVGCMFAELLTLKPLFQGA*AK-STQNPFHLDQLDNIFKY*GIQHRERWRSLASLP 527
            FD+AE+DL+ II+ HR    +K    +    VKS+L+Q+L+G++YLH+NW++HRDLKP+NILVMGEG E+G VKIAD G AR++ +PLK L++ + VVVT WYRAPELLLGA+HYT A+D+WA+GC+FAELLT +P+F        T NP+H DQLD IF   G    + W  +  +P
Sbjct:   97 FDFAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMP 274          
The following BLAST results are available for this feature:
BLAST of EY720590 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
CDKE1_ARATH7.887e-8566.80Cyclin-dependent kinase E-1 OS=Arabidopsis thalian... [more]
CDKE1_ORYSJ2.997e-8465.18Cyclin-dependent kinase E-1 OS=Oryza sativa subsp.... [more]
CDK8_DICDI1.656e-5861.02Probable cyclin-dependent kinase 8 OS=Dictyosteliu... [more]
CDK8_AEDAE7.451e-5155.87Cell division protein kinase 8 OS=Aedes aegypti GN... [more]
CDK19_MOUSE1.660e-5054.44Cell division protein kinase 19 OS=Mus musculus GN... [more]
CDK19_HUMAN1.660e-5054.44Cell division protein kinase 19 OS=Homo sapiens GN... [more]
CDK8_MOUSE1.076e-4954.49Cell division protein kinase 8 OS=Mus musculus GN=... [more]
CDK8_HUMAN1.076e-4954.49Cell division protein kinase 8 OS=Homo sapiens GN=... [more]
CDK8_DROME1.076e-4954.80Cell division protein kinase 8 OS=Drosophila melan... [more]
CDK8_XENTR3.131e-4953.93Cell division protein kinase 8 OS=Xenopus tropical... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-703-011-F02-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720590 ID=EY720590; Name=EY720590; organism=Citrus sinensis; type=EST; length=907bp
CACGCGTCCGTTTTGATTATGCTGAATATGACCTCTATGAAATCATTAGA
CATCACAGAGACAAGGTTAACCACACCATGAATCCATACACTGTGAAATC
AATTCTATGGCAGCTGCTTAATGGACTGAATTATCTCCATAGTAATTGGA
TCATACATCGTGATCTCAAGCCATCCAATATCTTGGTTATGGGTGAGGGA
GAAGAACAAGGAGTTGTTAAAATTGCAGACTTCGGACTTGCTAGAATTTA
TCAAGCACCCCTGAAGTTCTTGTCTGAAAATGGGGTTGTGGTAACTATTT
GGTATCGTGCACCAGAGTTGCTTCTTGGGGCAAAGCACTATACGAGTGCT
GTTGACATGTGGGCTGTTGGATGCATGTTTGCTGAGCTTTTGACTTTGAA
GCCACTATTTCAAGGGGCATAAGCCAAATCCACACAGAATCCATTCCATC
TTGACCAGCTTGACAATATATTCAAATATTAGGGCATCCAACACCGGGAG
AGGTGGCGCAGTCTGGCAAGTCTTCCTCGGTGGCGAGCAGATTCATGCAT
ATGCAGGGACGCATTAGAAAGCTAGGGGGCTGAGAAGGTAGGGTCCCCTT
GGGCGAAGAGTCCTGGGGTATAACCCTTATCGAAAAATGTGCAAGATGAT
CCGCGAGAGGCGTGAAGGCGCGCGCGGGCGTGGGGGAGGTAGTGGTGCGG
GATTCGCCCTGTACCGGGGGCAGATCCCTTTTTCGTAGCCAGCTTGGGAA
TATGGGGGGTGTGTGGCAGCTCAGTGGGGGAATCCGAGATCGGAATTGTA
GGTGGGCGGTACGCGTTTACCCAGGGACCGAGAAATGGAAGAATTTTATA
AAGATGATACGGGGACCTGGTCGGAAAGAAGAAGATGGCGCGGGCGAAAA
GACGGGG
back to top