EY720563

Overview
NameEY720563
Unique NameEY720563
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length858
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of EY720563 vs. ExPASy Swiss-Prot
Match: EIF3D_ARATH (Eukaryotic translation initiation factor 3 subunit D OS=Arabidopsis thaliana GN=TIF3D1 PE=1 SV=1)

HSP 1 Score: 255.373 bits (651), Expect = 3.041e-67
Identity = 120/133 (90.23%), Postives = 130/133 (97.74%), Query Frame = 2 
Query:   11 EFDSKYSGVDWRQKLETQRGAVLATELKNNANKLAKWTAQSLLASADLMKLGYVSRVHPRDHFNHVILAVMGYKPKDFATQINLSTANMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPPDAFENDY 409
            EFD KYSGVDWRQKLETQRGAVLATELKNN NKLAKWTAQ+LLA+AD+MK+G+VSRVHPRDHFNHVIL+V+GYKPKDFA QINL+T+NMWGIVKSIVDLCMKL+EGKYVLVKDPSKPQVRIYEVPPDAFENDY
Sbjct:  418 EFDPKYSGVDWRQKLETQRGAVLATELKNNGNKLAKWTAQALLANADMMKIGFVSRVHPRDHFNHVILSVLGYKPKDFAGQINLNTSNMWGIVKSIVDLCMKLSEGKYVLVKDPSKPQVRIYEVPPDAFENDY 550
[Close]
BLAST of EY720563 vs. ExPASy Swiss-Prot
Match: EIF3D_SCLS1 (Eukaryotic translation initiation factor 3 subunit D OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 / Ss-1) GN=SS1G_13938 PE=3 SV=1)

HSP 1 Score: 179.104 bits (453), Expect = 2.770e-44
Identity = 84/136 (61.76%), Postives = 113/136 (83.09%), Query Frame = 2 
Query:   11 EFDSKYSG----VDWRQKLETQRGAVLATELKNNANKLAKWTAQSLLASADLMKLGYVSRVHPRDHFNHVILAVMGYKPKDFATQINLSTANMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPPDAFEND 406
            EFDSK  G    +DWR KL +QRGAV+ATE+KNN+ KLA+WT QS++A AD+MKLG+VSR +P+ +  HVIL V+G+KP+DFA+Q+NLS +N WGIV++IVD+C+K  EGKYVLVKDP+KP +R+Y+VP  +FE+D
Sbjct:  428 EFDSKAQGSGGALDWRTKLVSQRGAVVATEMKNNSCKLARWTVQSIIAKADVMKLGFVSRANPKLNDRHVILGVIGWKPRDFASQMNLSLSNGWGIVRTIVDMCLKREEGKYVLVKDPNKPILRLYQVPAGSFEDD 563
[Close]
BLAST of EY720563 vs. ExPASy Swiss-Prot
Match: EIF3D_BOTFB (Eukaryotic translation initiation factor 3 subunit D OS=Botryotinia fuckeliana (strain B05.10) GN=BC1G_12797 PE=3 SV=2)

HSP 1 Score: 178.718 bits (452), Expect = 3.618e-44
Identity = 83/136 (61.03%), Postives = 113/136 (83.09%), Query Frame = 2 
Query:   11 EFDSKYSG----VDWRQKLETQRGAVLATELKNNANKLAKWTAQSLLASADLMKLGYVSRVHPRDHFNHVILAVMGYKPKDFATQINLSTANMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPPDAFEND 406
            EFDSK  G    +DWR KL +QRGAV+ATE+KNN+ KLA+WT QS++A AD+MKLG+VSR +P+ +  HV+L V+G+KP+DFA+Q+NLS +N WGIV++IVD+C+K  EGKYVLVKDP+KP +R+Y+VP  +FE+D
Sbjct:  427 EFDSKAQGSGGALDWRTKLVSQRGAVVATEMKNNSCKLARWTVQSIIAKADVMKLGFVSRANPKLNDRHVVLGVIGWKPRDFASQMNLSLSNGWGIVRTIVDMCLKREEGKYVLVKDPNKPILRLYQVPAGSFEDD 562
[Close]
BLAST of EY720563 vs. ExPASy Swiss-Prot
Match: EI3D1_DROYA (Eukaryotic translation initiation factor 3 subunit D-1 OS=Drosophila yakuba GN=eIF-3p66 PE=3 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 6.171e-44
Identity = 81/133 (60.90%), Postives = 109/133 (81.95%), Query Frame = 2 
Query:   11 EFDSKYS-GVDWRQKLETQRGAVLATELKNNANKLAKWTAQSLLASADLMKLGYVSRVHPRDHFNHVILAVMGYKPKDFATQINLSTANMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPPDAFEND 406
            E+DSK + GV+WRQKL+TQRGAVLA EL+NNA KLAKWT Q++LA +D +KLGYVSR++PRDH  HVIL    +KP +FATQINLS  N WGI++ I+DL MK  +GKY+++KDP+KP +R+Y++P + F++D
Sbjct:  405 EWDSKLANGVEWRQKLDTQRGAVLANELRNNACKLAKWTVQAVLAGSDQLKLGYVSRINPRDHSRHVILGTQQFKPHEFATQINLSMDNAWGILRCIIDLVMKQKDGKYLIMKDPNKPIIRLYDIPDNTFDSD 537
[Close]
BLAST of EY720563 vs. ExPASy Swiss-Prot
Match: EI3D1_DROWI (Eukaryotic translation initiation factor 3 subunit D-1 OS=Drosophila willistoni GN=eIF-3p66 PE=3 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 6.171e-44
Identity = 81/133 (60.90%), Postives = 109/133 (81.95%), Query Frame = 2 
Query:   11 EFDSKYS-GVDWRQKLETQRGAVLATELKNNANKLAKWTAQSLLASADLMKLGYVSRVHPRDHFNHVILAVMGYKPKDFATQINLSTANMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPPDAFEND 406
            E+DSK + GV+WRQKL+TQRGAVLA EL+NNA KLAKWT Q++LA +D +KLGYVSR++PRDH  HVIL    +KP +FATQINLS  N WGI++ I+DL MK  +GKY+++KDP+KP +R+Y++P + F++D
Sbjct:  403 EWDSKMANGVEWRQKLDTQRGAVLANELRNNACKLAKWTVQAVLAGSDQLKLGYVSRINPRDHSRHVILGTQQFKPHEFATQINLSMDNAWGILRCIIDLVMKQRDGKYLIMKDPNKPIIRLYDIPDNTFDSD 535
[Close]
BLAST of EY720563 vs. ExPASy Swiss-Prot
Match: EI3D1_DROVI (Eukaryotic translation initiation factor 3 subunit D-1 OS=Drosophila virilis GN=eIF-3p66 PE=3 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 6.171e-44
Identity = 81/133 (60.90%), Postives = 109/133 (81.95%), Query Frame = 2 
Query:   11 EFDSKYS-GVDWRQKLETQRGAVLATELKNNANKLAKWTAQSLLASADLMKLGYVSRVHPRDHFNHVILAVMGYKPKDFATQINLSTANMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPPDAFEND 406
            E+DSK + GV+WRQKL+TQRGAVLA EL+NNA KLAKWT Q++LA +D +KLGYVSR++PRDH  HVIL    +KP +FATQINLS  N WGI++ I+DL MK  +GKY+++KDP+KP +R+Y++P + F++D
Sbjct:  405 EWDSKLANGVEWRQKLDTQRGAVLANELRNNACKLAKWTVQAVLAGSDQLKLGYVSRINPRDHSRHVILGTQQFKPHEFATQINLSMDNAWGILRCIIDLVMKQKDGKYLIMKDPNKPIIRLYDIPDNTFDSD 537
[Close]
BLAST of EY720563 vs. ExPASy Swiss-Prot
Match: EI3D1_DROSI (Eukaryotic translation initiation factor 3 subunit D-1 OS=Drosophila simulans GN=eIF-3p66 PE=3 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 6.171e-44
Identity = 81/133 (60.90%), Postives = 109/133 (81.95%), Query Frame = 2 
Query:   11 EFDSKYS-GVDWRQKLETQRGAVLATELKNNANKLAKWTAQSLLASADLMKLGYVSRVHPRDHFNHVILAVMGYKPKDFATQINLSTANMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPPDAFEND 406
            E+DSK + GV+WRQKL+TQRGAVLA EL+NNA KLAKWT Q++LA +D +KLGYVSR++PRDH  HVIL    +KP +FATQINLS  N WGI++ I+DL MK  +GKY+++KDP+KP +R+Y++P + F++D
Sbjct:  405 EWDSKLANGVEWRQKLDTQRGAVLANELRNNACKLAKWTVQAVLAGSDQLKLGYVSRINPRDHSRHVILGTQQFKPHEFATQINLSMDNAWGILRCIIDLVMKQKDGKYLIMKDPNKPIIRLYDIPDNTFDSD 537
[Close]
BLAST of EY720563 vs. ExPASy Swiss-Prot
Match: EI3D1_DROSE (Eukaryotic translation initiation factor 3 subunit D-1 OS=Drosophila sechellia GN=eIF-3p66 PE=3 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 6.171e-44
Identity = 81/133 (60.90%), Postives = 109/133 (81.95%), Query Frame = 2 
Query:   11 EFDSKYS-GVDWRQKLETQRGAVLATELKNNANKLAKWTAQSLLASADLMKLGYVSRVHPRDHFNHVILAVMGYKPKDFATQINLSTANMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPPDAFEND 406
            E+DSK + GV+WRQKL+TQRGAVLA EL+NNA KLAKWT Q++LA +D +KLGYVSR++PRDH  HVIL    +KP +FATQINLS  N WGI++ I+DL MK  +GKY+++KDP+KP +R+Y++P + F++D
Sbjct:  405 EWDSKLANGVEWRQKLDTQRGAVLANELRNNACKLAKWTVQAVLAGSDQLKLGYVSRINPRDHSRHVILGTQQFKPHEFATQINLSMDNAWGILRCIIDLVMKQKDGKYLIMKDPNKPIIRLYDIPDNTFDSD 537
[Close]
BLAST of EY720563 vs. ExPASy Swiss-Prot
Match: EI3D1_DROMO (Eukaryotic translation initiation factor 3 subunit D-1 OS=Drosophila mojavensis GN=eIF-3p66 PE=3 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 6.171e-44
Identity = 81/133 (60.90%), Postives = 109/133 (81.95%), Query Frame = 2 
Query:   11 EFDSKYS-GVDWRQKLETQRGAVLATELKNNANKLAKWTAQSLLASADLMKLGYVSRVHPRDHFNHVILAVMGYKPKDFATQINLSTANMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPPDAFEND 406
            E+DSK + GV+WRQKL+TQRGAVLA EL+NNA KLAKWT Q++LA +D +KLGYVSR++PRDH  HVIL    +KP +FATQINLS  N WGI++ I+DL MK  +GKY+++KDP+KP +R+Y++P + F++D
Sbjct:  405 EWDSKLANGVEWRQKLDTQRGAVLANELRNNACKLAKWTVQAVLAGSDQLKLGYVSRINPRDHSRHVILGTQQFKPHEFATQINLSMDNAWGILRCIIDLVMKQKDGKYLIMKDPNKPIIRLYDIPDNTFDSD 537
[Close]
BLAST of EY720563 vs. ExPASy Swiss-Prot
Match: EI3D1_DROME (Eukaryotic translation initiation factor 3 subunit D-1 OS=Drosophila melanogaster GN=eIF-3p66 PE=1 SV=1)

HSP 1 Score: 177.948 bits (450), Expect = 6.171e-44
Identity = 81/133 (60.90%), Postives = 109/133 (81.95%), Query Frame = 2 
Query:   11 EFDSKYS-GVDWRQKLETQRGAVLATELKNNANKLAKWTAQSLLASADLMKLGYVSRVHPRDHFNHVILAVMGYKPKDFATQINLSTANMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPPDAFEND 406
            E+DSK + GV+WRQKL+TQRGAVLA EL+NNA KLAKWT Q++LA +D +KLGYVSR++PRDH  HVIL    +KP +FATQINLS  N WGI++ I+DL MK  +GKY+++KDP+KP +R+Y++P + F++D
Sbjct:  405 EWDSKLANGVEWRQKLDTQRGAVLANELRNNACKLAKWTVQAVLAGSDQLKLGYVSRINPRDHSRHVILGTQQFKPHEFATQINLSMDNAWGILRCIIDLVMKQKDGKYLIMKDPNKPIIRLYDIPDNTFDSD 537
The following BLAST results are available for this feature:
BLAST of EY720563 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 60
Match NameE-valueIdentityDescription
EIF3D_ARATH3.041e-6790.23Eukaryotic translation initiation factor 3 subunit... [more]
EIF3D_SCLS12.770e-4461.76Eukaryotic translation initiation factor 3 subunit... [more]
EIF3D_BOTFB3.618e-4461.03Eukaryotic translation initiation factor 3 subunit... [more]
EI3D1_DROYA6.171e-4460.90Eukaryotic translation initiation factor 3 subunit... [more]
EI3D1_DROWI6.171e-4460.90Eukaryotic translation initiation factor 3 subunit... [more]
EI3D1_DROVI6.171e-4460.90Eukaryotic translation initiation factor 3 subunit... [more]
EI3D1_DROSI6.171e-4460.90Eukaryotic translation initiation factor 3 subunit... [more]
EI3D1_DROSE6.171e-4460.90Eukaryotic translation initiation factor 3 subunit... [more]
EI3D1_DROMO6.171e-4460.90Eukaryotic translation initiation factor 3 subunit... [more]
EI3D1_DROME6.171e-4460.90Eukaryotic translation initiation factor 3 subunit... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-703-011-B08-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720563 ID=EY720563; Name=EY720563; organism=Citrus sinensis; type=EST; length=858bp
CACGCGTCCGGAGTTCGATTCCAAGTACTCTGGTGTTGATTGGAGGCAGA
AGTTGGAGACTCAAAGGGGTGCGGTTTTAGCCACTGAGTTGAAGAACAAT
GCTAATAAGTTGGCAAAATGGACTGCACAATCATTGTTGGCGAGTGCTGA
TTTGATGAAATTGGGATATGTTTCAAGGGTTCATCCACGTGATCATTTTA
ACCATGTGATATTGGCTGTGATGGGGTATAAGCCAAAGGATTTTGCCACC
CAGATTAACTTGAGTACTGCAAATATGTGGGGAATTGTGAAGAGTATTGT
GGATTTGTGCATGAAGTTGAATGAGGGGAAGTATGTGCTTGTGAAGGATC
CATCTAAGCCGCAAGTGAGGATCTATGAGGTTCCTCCAGATGCATTTGAG
AATGATTATGTGGAGGAGCCTTTGCCAGAGGAGGAGCAGGTTCAGCCACC
TACTGAGAATGCTGAAGGAGTGGAGGCAAATGGAGCTGCAAATGATTTGG
ATGATGTTGTTGTTGATGCTCAAGCTTGATGGTAATATTCGTTATTATAT
TTGATTTATTTTGGTTTAGCGTTTGCACTTTAATGAGTTGTACTCTTTTA
GCTACATGTCTTCTATAACTATTGTTTGCATTAAGATTTGTAGTTTTGGT
ATCTATAATATATATTTCCAACCAGCCTGAACATGGTTATTGAATTTTCG
GTGGTAACCGCCGGAAAGAATAATGGATTCCTGGGTCAAGAAGCTGGGTG
TTAAATGTGGCATATATGTGAGCAGAGGCGGGCAGGCCCCCCGCGGTGTT
CGCTGGTGGGGTCCTGCCGTCACGACTTGGACCTATTGGCTCTGCTGCGA
GGTAAAGG
back to top