EY720550

Overview
NameEY720550
Unique NameEY720550
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length909
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11203 contig Csv1_Contig11203:1..909. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY720550 vs. ExPASy Swiss-Prot
Match: ATMB_SALTY (Magnesium-transporting ATPase, P-type 1 OS=Salmonella typhimurium GN=mgtB PE=2 SV=3)

HSP 1 Score: 230.335 bits (586), Expect = 1.153e-59
Identity = 115/172 (66.86%), Postives = 139/172 (80.81%), Query Frame = -2 
Query:    3 DTNLMVXAQGVIQGPRDLXATSLKYLNMTASSNFGNVFSVLVASAWLPWEPMLSLQLLIQNLVYDISQLTLPWDRMDDEFLKKPRKWEAGNIQRFMLWLGPTSSVFDITTYFLMWTVFGAGAAYALHGGDGGQTIMNSGWFIEGLVSQTFVVHMLRTRKIPFLQSTASLPVL 518
            + +LMV  +GVI+G R+     +KYLNMTASSNFGNVFSVLVASA++P+ PML++ LLIQNL+YDISQL+LPWD+MD EFL+KPRKW+A NI RFMLW+GPTSS+FDITT+ LMW VF A    A       Q +  SGWFIEGL+SQT VVHMLRT+KIPF+QS A+LPVL
Sbjct:  684 EKDLMVLEEGVIKG-RETFGNIIKYLNMTASSNFGNVFSVLVASAFIPFLPMLAIHLLIQNLMYDISQLSLPWDKMDKEFLRKPRKWDAKNIGRFMLWIGPTSSIFDITTFALMWYVFAANNVEA-------QALFQSGWFIEGLLSQTLVVHMLRTQKIPFIQSRATLPVL 847
[Close]
BLAST of EY720550 vs. ExPASy Swiss-Prot
Match: ATMA_ECOLI (Magnesium-transporting ATPase, P-type 1 OS=Escherichia coli (strain K12) GN=mgtA PE=1 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 7.012e-49
Identity = 95/172 (55.23%), Postives = 128/172 (74.42%), Query Frame = -2 
Query:    3 DTNLMVXAQGVIQGPRDLXATSLKYLNMTASSNFGNVFSVLVASAWLPWEPMLSLQLLIQNLVYDISQLTLPWDRMDDEFLKKPRKWEAGNIQRFMLWLGPTSSVFDITTYFLMWTVFGAGAAYALHGGDGGQTIMNSGWFIEGLVSQTFVVHMLRTRKIPFLQSTASLPVL 518
            + +LMV  +GVI+G R   A  LKY+ MTASSNFGNVFSVLVASA+LP+ PML L LLIQNL+YD+SQ+ +P+D +DDE ++KP++W   ++ RFM++ GP SS+FDI T+ LMW VF A            QT+  SGWF+ GL+SQT +VHM+RTR++PF+QS AS P++
Sbjct:  675 EKSLMVLEEGVIEGRRTF-ANMLKYIKMTASSNFGNVFSVLVASAFLPFLPMLPLHLLIQNLLYDVSQVAIPFDNVDDEQIQKPQRWNPADLGRFMIFFGPISSIFDILTFCLMWWVFHANTPET-------QTLFQSGWFVVGLLSQTLIVHMIRTRRVPFIQSCASWPLM 838
[Close]
BLAST of EY720550 vs. ExPASy Swiss-Prot
Match: ATMA_ECO57 (Magnesium-transporting ATPase, P-type 1 OS=Escherichia coli O157:H7 GN=mgtA PE=3 SV=1)

HSP 1 Score: 194.512 bits (493), Expect = 7.012e-49
Identity = 95/172 (55.23%), Postives = 128/172 (74.42%), Query Frame = -2 
Query:    3 DTNLMVXAQGVIQGPRDLXATSLKYLNMTASSNFGNVFSVLVASAWLPWEPMLSLQLLIQNLVYDISQLTLPWDRMDDEFLKKPRKWEAGNIQRFMLWLGPTSSVFDITTYFLMWTVFGAGAAYALHGGDGGQTIMNSGWFIEGLVSQTFVVHMLRTRKIPFLQSTASLPVL 518
            + +LMV  +GVI+G R   A  LKY+ MTASSNFGNVFSVLVASA+LP+ PML L LLIQNL+YD+SQ+ +P+D +DDE ++KP++W   ++ RFM++ GP SS+FDI T+ LMW VF A            QT+  SGWF+ GL+SQT +VHM+RTR++PF+QS AS P++
Sbjct:  675 EKSLMVLEEGVIEGRRTF-ANMLKYIKMTASSNFGNVFSVLVASAFLPFLPMLPLHLLIQNLLYDVSQVAIPFDNVDDEQIQKPQRWNPADLGRFMIFFGPISSIFDILTFCLMWWVFHANTPET-------QTLFQSGWFVVGLLSQTLIVHMIRTRRVPFIQSCASWPLM 838
[Close]
BLAST of EY720550 vs. ExPASy Swiss-Prot
Match: ATMA_SALTY (Magnesium-transporting ATPase, P-type 1 OS=Salmonella typhimurium GN=mgtA PE=3 SV=1)

HSP 1 Score: 189.889 bits (481), Expect = 1.727e-47
Identity = 92/172 (53.49%), Postives = 128/172 (74.42%), Query Frame = -2 
Query:    3 DTNLMVXAQGVIQGPRDLXATSLKYLNMTASSNFGNVFSVLVASAWLPWEPMLSLQLLIQNLVYDISQLTLPWDRMDDEFLKKPRKWEAGNIQRFMLWLGPTSSVFDITTYFLMWTVFGAGAAYALHGGDGGQTIMNSGWFIEGLVSQTFVVHMLRTRKIPFLQSTASLPVL 518
            + +LMV  +GVI+G R   +  LKY+ MTASSNFGNVFSVLVASA+LP+ PML L LLIQNL+YD+SQ+ +P+D +D+E ++KP++W   ++ RFM++ GP SS+FDI T+ LMW VF A            QT+  SGWF+ GL+SQT +VHM+RTR++PF+QS A+ P++
Sbjct:  679 EKSLMVLEEGVIEGRRTF-SNMLKYIKMTASSNFGNVFSVLVASAFLPFLPMLPLHLLIQNLLYDVSQVAIPFDNVDEEQIQKPQRWNPADLGRFMVFFGPISSIFDILTFCLMWWVFHANTPET-------QTLFQSGWFVVGLLSQTLIVHMIRTRRLPFIQSRAAWPLM 842
The following BLAST results are available for this feature:
BLAST of EY720550 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 4
Match NameE-valueIdentityDescription
ATMB_SALTY1.153e-5966.86Magnesium-transporting ATPase, P-type 1 OS=Salmone... [more]
ATMA_ECOLI7.012e-4955.23Magnesium-transporting ATPase, P-type 1 OS=Escheri... [more]
ATMA_ECO577.012e-4955.23Magnesium-transporting ATPase, P-type 1 OS=Escheri... [more]
ATMA_SALTY1.727e-4753.49Magnesium-transporting ATPase, P-type 1 OS=Salmone... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-703-011-A01-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720550 ID=EY720550; Name=EY720550; organism=Citrus sinensis; type=EST; length=909bp
AACAGCACCGGCAGCGACGCCGTGCTCTGCAGGAACGGGATCTTGCGGGT
GCGCAGCATGTGCACCACGAAAGTCTGCGATACCAGGCCCTCGATGAACC
AGCCCGAATTCATGATGGTCTGGCCGCCGTCGCCGCCGTGCAGGGCATAG
GCCGCGCCCGCGCCGAACACCGTCCACATCAGGAAATACGTGGTGATGTC
GAACACCGACGAGGTCGGCCCCAGCCACAGCATGAAGCGCTGGATATTGC
CCGCTTCCCACTTGCGCGGCTTCTTCAGGAACTCATCGTCCATGCGGTCC
CACGGCAGGGTCAGCTGCGAAATGTCGTACACCAGGTTCTGGATCAGCAG
CTGCAGCGACAGCATCGGCTCCCACGGCAGCCAGGCCGACGCCACCAGCA
CCGAGAACACGTTGCCGAAGTTCGAGCTGGCGGTCATGTTCAGGTACTTG
AGGGATGTTGCCNGAAGGTCTCGCGGGCCTTGGATGACGCCCTGTGCCAN
CACCATCAGGTTTGTGTCGGATCGAGAGGAGGTCGTGGGGTCTCCTGGGG
GAAGGTGGTGGCCGGTGGTGCGGCGGGAGGCGTAGGTCGCCGTTGGGCGG
CGGCGGGGGGTGCGTGGGGGGCGGGGGGGGGGGGGTGGGGGGGGTGGTGG
GGGGGGCTCCGCCTGTGAGGGCGCGCACGCGGAGAGCACGGGGCGGGGCG
TGCCGACCAGGCGCGGGGGGCCTCAGCGCGCGGGGGGCTACGTCCGCGTC
GTCCGGCGGGCGCGCGGGGGGGGGGGGGGGGCGGTGGGCCACGGTGGGGG
GGGGGGGAGGGGGGGGGAGTCTGGCTTGGCGGTGGGTGGGAGGGGGTGGG
GGGGGGGGGGGGGGGGGGGGGGGGGAGGGGGGGGGGGGGGGAGGGGGGGG
GGTGCGGGG
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