EY720545

Overview
NameEY720545
Unique NameEY720545
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length896
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
EY720545_ssr173 microsatellite EY720545_ssr173:173..190. BLAST: Citrus ESTs to Prunus persica proteins V1
Csv1_Contig11201 contig Csv1_Contig11201:1..879. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY720545 vs. ExPASy Swiss-Prot
Match: RFS6_ARATH (Probable galactinol--sucrose galactosyltransferase 6 OS=Arabidopsis thaliana GN=RFS6 PE=2 SV=2)

HSP 1 Score: 276.174 bits (705), Expect = 1.288e-83
Identity = 132/197 (67.01%), Postives = 163/197 (82.74%), Query Frame = 1
Query:  199 MTIKPVVRIAERKLIVKDRTILTGVPDNLITTSGSTSGPVEGVFIGAAFDEESSRHVLPIGALRDIRFLACFRFKLWWMAQKMGDHGSEIPLETQFLLVETKEGSHIESNDGN--EDNQIVYTVFLPLIEGSFRACXQGNANDELELCLESGDSDTQASSFSHSLFVHAGTDPFGDNH*SIRAVNLHLKTFRHDTKK 783
            MTIKP VRI++  LI+K+RTILTGVPDN+ITTS S +GPVEGVF+GA F++E S+H++PIG LR+ RF++CFRFKLWWMAQ+MG+ G +IP ETQFLLVE+ +GSH+ES+  N  E NQ VYTVFLPLIEGSFR+C QGN NDE+ELCLESGD DT+ SSF+HSL++HAGTDPF     +IR V LHL +FR   +K
Sbjct:    1 MTIKPAVRISDGNLIIKNRTILTGVPDNVITTSASEAGPVEGVFVGAVFNKEESKHIVPIGTLRNSRFMSCFRFKLWWMAQRMGEMGRDIPYETQFLLVESNDGSHLESDGANGVECNQKVYTVFLPLIEGSFRSCLQGNVNDEVELCLESGDVDTKRSSFTHSLYIHAGTDPFQTITDAIRTVKLHLNSFRQRHEK 197          

HSP 2 Score: 55.8398 bits (133), Expect = 1.288e-83
Identity = 22/28 (78.57%), Postives = 25/28 (89.29%), Query Frame = 3
Query:  771 RHEKKLRGIVDYFGWCTWDAFYKKYSGE 854
            RHEKKL GIVDYFGWCTWDAFY++ + E
Sbjct:  194 RHEKKLPGIVDYFGWCTWDAFYQEVTQE 221          
BLAST of EY720545 vs. ExPASy Swiss-Prot
Match: RFS2_ARATH (Probable galactinol--sucrose galactosyltransferase 2 OS=Arabidopsis thaliana GN=RFS2 PE=2 SV=2)

HSP 1 Score: 201.445 bits (511), Expect = 5.613e-51
Identity = 98/195 (50.26%), Postives = 132/195 (67.69%), Query Frame = 1
Query:  199 MTIKPVVRIAERKLIVKDRTILTGVPDNLITTSGSTSGPVEGVFIGAAFDEESSRHVLPIGALRDIRFLACFRFKLWWMAQKMGDHGSEIPLETQFLLVETKEGSHIESNDGNEDNQIVYTVFLPLIEGSFRACXQGNANDELELCLESGDSDTQASSFSHSLFVHAGTDPFGDNH*SIRAVNLHLKTFRHDTKK 783
            MTI   + +    L+V+ +TILT +PDN+I T  + +G V G FIGA F++  S HV PIG L  +RF+ CFRFKLWWM Q+MG  G +IPLETQF+L+E+K+   +E N   +D   VYTVFLPL+EG FRA  QGN  +E+E+C ESGD   + S  +H ++VHAGT+PF     S++AV  H++TF H  KK
Sbjct:    1 MTITSNISVQNDNLVVQGKTILTKIPDNIILTPVTGNGFVSGSFIGATFEQSKSLHVFPIGVLEGLRFMCCFRFKLWWMTQRMGSCGKDIPLETQFMLLESKD--EVEGN--GDDAPTVYTVFLPLLEGQFRAVLQGNEKNEIEICFESGDKAVETSQGTHLVYVHAGTNPFEVIRQSVKAVERHMQTFHHREKK 191          
BLAST of EY720545 vs. ExPASy Swiss-Prot
Match: RFS1_ARATH (Probable galactinol--sucrose galactosyltransferase 1 OS=Arabidopsis thaliana GN=RFS1 PE=2 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 1.339e-44
Identity = 88/195 (45.13%), Postives = 120/195 (61.54%), Query Frame = 1
Query:  199 MTIKPVVRIAERKLIVKDRTILTGVPDNLITTSGSTSGPVEGVFIGAAFDEESSRHVLPIGALRDIRFLACFRFKLWWMAQKMGDHGSEIPLETQFLLVETKEGSHIESNDGNEDNQIVYTVFLPLIEGSFRACXQGNANDELELCLESGDSDTQASSFSHSLFVHAGTDPFGDNH*SIRAVNLHLKTFRHDTKK 783
            MT+   + + +  L+V    +L GVP+N++ T  S +  ++G FIG   D+  S  V  +G L D+RF+  FRFKLWWM Q+MG +G EIP ETQFL+VE  +GS +    G  D    Y VFLP++EG FRA  QGN  +ELE+CLESGD        SH +FV AG+DPF     +++AV  HL+TF H  +K
Sbjct:    1 MTVGAGISVTDSDLVVLGHRVLHGVPENVLVTPASGNALIDGAFIGVTSDQTGSHRVFSLGKLEDLRFMCVFRFKLWWMTQRMGTNGKEIPCETQFLIVEANQGSDL----GGRDQSSSYVVFLPILEGDFRAVLQGNEANELEICLESGDPTVDQFEGSHLVFVAAGSDPFDVITKAVKAVEQHLQTFSHRERK 191          
BLAST of EY720545 vs. ExPASy Swiss-Prot
Match: RFS5_ARATH (Probable galactinol--sucrose galactosyltransferase 5 OS=Arabidopsis thaliana GN=RFS5 PE=1 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 3.534e-33
Identity = 70/198 (35.35%), Postives = 113/198 (57.07%), Query Frame = 1
Query:  220 RIAERKLIVKDRTILTGVPDNLITTSGSTSGPVEGV--------FIGAAFD-EESSRHVLPIGALRDIRFLACFRFKLWWMAQKMGDHGSEIPLETQFLLVETKEGSHIESNDGNEDNQIVYTVFLPLIEGSFRACXQGNANDELELCLESGDSDTQASSFSHSLFVHAGTDPFGDNH*SIRAVNLHLKTFRHDTKKS 786
            R+ +  L+   + +LT VP N+  TS       +GV        FIG   D E  S HV  IG L++IRF++ FRFK+WW    +G +G +I  ETQ ++++ + GS  +S  G+   +  Y + LPL+EGSFR+  Q   +D++ +C+ESG ++   S F   ++VHAG DPF     +++ + +H+ TF+   +KS
Sbjct:   23 RLEDSTLLANGQVVLTDVPVNVTLTSSPYLVDKDGVPLDVSAGSFIGFNLDGEPKSHHVASIGKLKNIRFMSIFRFKVWWTTHWVGSNGRDIENETQIIILD-QSGS--DSGPGSGSGR-PYVLLLPLLEGSFRSSFQSGEDDDVAVCVESGSTEVTGSEFRQIVYVHAGDDPFKLVKDAMKVIRVHMNTFKLLEEKS 216          

HSP 2 Score: 40.817 bits (94), Expect = 3.534e-33
Identity = 16/20 (80.00%), Postives = 16/20 (80.00%), Query Frame = 3
Query:  777 EKKLRGIVDYFGWCTWDAFY 836
            EK   GIVD FGWCTWDAFY
Sbjct:  214 EKSPPGIVDKFGWCTWDAFY 233          
BLAST of EY720545 vs. ExPASy Swiss-Prot
Match: RFS_ORYSJ (Galactinol--sucrose galactosyltransferase OS=Oryza sativa subsp. japonica GN=RFS PE=1 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 3.808e-32
Identity = 68/194 (35.05%), Postives = 98/194 (50.52%), Query Frame = 1
Query:  211 PVVRIAERKLIVKDRTILTGVPDNLITTSGSTSGP-------VEGVFIGAAFDEESSRHVLPIGALRDIRFLACFRFKLWWMAQKMGDHGSEIPLETQFLLVETKEGSHIESNDGNEDNQIVYTVFLPLIEGSFRACXQ-GNANDELELCLESGDSDTQASSFSHSLFVHAGTDPFGDNH*SIRAVNLHLKTFR 768
            P   +  + L V     L  VP N+  T  ST  P         G F+G        RHV+PIG LRD RF++ FRFK+WW    +G +G ++  ETQ ++++            +      Y + LP++EG FRAC + G A D + + LESG S  + S F  ++++HAG DPF     ++R V  HL TFR
Sbjct:   26 PRFTLKGKDLAVDGHPFLLDVPANIRLTPASTLVPNSDVPAAAAGSFLGFDAPAAKDRHVVPIGKLRDTRFMSIFRFKVWWTTHWVGTNGRDVENETQMMILDQ------SGTKSSPTGPRPYVLLLPIVEGPFRACLESGKAEDYVHMVLESGSSTVRGSVFRSAVYLHAGDDPFDLVKDAMRVVRAHLGTFR 213          

HSP 2 Score: 41.9726 bits (97), Expect = 3.808e-32
Identity = 20/39 (51.28%), Postives = 22/39 (56.41%), Query Frame = 3
Query:  777 EKKLRGIVDYFGWCTWDAFYKKYSGE-PWRRAQQFRQGG 890
            EK    IVD FGWCTWDAFY K   E  W   ++   GG
Sbjct:  217 EKTPPPIVDKFGWCTWDAFYLKVHPEGVWEGVRRLADGG 255          
BLAST of EY720545 vs. ExPASy Swiss-Prot
Match: RFS_PEA (Galactinol--sucrose galactosyltransferase OS=Pisum sativum GN=RFS PE=1 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 1.124e-27
Identity = 61/198 (30.81%), Postives = 94/198 (47.47%), Query Frame = 1
Query:  232 RKLIVKDRTILTGVPDNLITTSGSTSGPV-------------------EGVFIGAAFDEESSRHVLPIGALRDIRFLACFRFKLWWMAQKMGDHGSEIPLETQFLLVETKEGSHIESNDGNEDNQIVYTVFLPLIEGSFRACXQGNANDELELCLESGDSDTQASSFSHSLFVHAGTDPFGDNH*SIRAVNLHLKTFR 768
            R  +V     LT VP N+ TT+ ST  P                    +G F+G    E  S HV+P+G L+ I+F + FRFK+WW    +G +G E+  ETQ L++           D N      Y + LP++E SFR   Q   ND +++ +ESG +    S+F   L++H   DP+     +++ +   L TF+
Sbjct:   35 RNFLVNGHPFLTQVPPNITTTTTSTPSPFLDFKSNKDTIANNNNTLQQQGCFVGFNTTEAKSHHVVPLGKLKGIKFTSIFRFKVWWTTHWVGTNGHELQHETQILIL-----------DKNISLGRPYVLLLPILENSFRTSLQPGLNDYVDMSVESGSTHVTGSTFKACLYLHLSNDPYRLVKEAVKVIQTKLGTFK 221          

HSP 2 Score: 38.5058 bits (88), Expect = 1.124e-27
Identity = 17/39 (43.59%), Postives = 21/39 (53.85%), Query Frame = 3
Query:  777 EKKLRGIVDYFGWCTWDAFY-KKYSGEPWRRAQQFRQGG 890
            EK    I++ FGWCTWDAFY K +    W   +    GG
Sbjct:  225 EKTPPSIIEKFGWCTWDAFYLKVHPKGVWEGVKALTDGG 263          
BLAST of EY720545 vs. ExPASy Swiss-Prot
Match: RFS4_ARATH (Probable galactinol--sucrose galactosyltransferase 4 OS=Arabidopsis thaliana GN=RFS4 PE=2 SV=2)

HSP 1 Score: 89.3521 bits (220), Expect = 6.710e-24
Identity = 62/209 (29.67%), Postives = 99/209 (47.37%), Query Frame = 1
Query:  208 KPVVR-----IAERKLIVKDRT-ILTGVPDNLITT-----SGSTSGPV-----------EGVFIGAAFDEESSRHVLPIGALRDIRFLACFRFKLWWMAQKMGDHGSEIPLETQFLLVETKEGSHIESNDGNEDNQIVYTVFLPLIEGSFRACXQGNANDELELCLESGDSDTQASSFSHSLFVHAGTDPFGDNH*SIRAVNLHLKTFR 768
            KP+++     ++E  L  KD T IL  VP N+  T     S ST  P+           +G F+G   +  S R    +G   D  FL+ FRFK+WW    +G  GS++  ETQ+++++  E   I+S          Y   +P IEG+FRA         + +C ESG +  + SSF    ++H   +P+     +  A+ +H+ TF+
Sbjct:   26 KPILQPNSFNLSEGSLCAKDSTPILFDVPQNVTFTPFSSHSISTDAPLPILLRVQANAHKGGFLGFTKESPSDRLTNSLGRFEDREFLSLFRFKMWWSTAWIGKSGSDLQAETQWVMLKIPE---IDS----------YVAIIPTIEGAFRASLTPGEKGNVLICAESGSTKVKESSFKSIAYIHICDNPYNLMKEAFSALRVHMNTFK 221          

HSP 2 Score: 42.743 bits (99), Expect = 6.710e-24
Identity = 20/39 (51.28%), Postives = 22/39 (56.41%), Query Frame = 3
Query:  777 EKKLRGIVDYFGWCTWDAFYKKYS-GEPWRRAQQFRQGG 890
            EKKL  IVD FGWCTWDA Y        W   ++F  GG
Sbjct:  225 EKKLPKIVDKFGWCTWDACYLTVDPATIWTGVKEFEDGG 263          
BLAST of EY720545 vs. ExPASy Swiss-Prot
Match: STSYN_PEA (Stachyose synthase OS=Pisum sativum GN=STS1 PE=1 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 7.175e-23
Identity = 59/200 (29.50%), Postives = 93/200 (46.50%), Query Frame = 1
Query:  223 IAERKLIVKDRTILTGVPDNLITTS-GSTSGPVE-----------------GVFIGAAFDEESSRHVLPIGALRDIRFLACFRFKLWWMAQKMGDHGSEIPLETQFLLVETKEGSHIESNDGNEDNQIVYTVFLPLIEGSFRACXQGNANDELELCLESGDSDTQASSFSHSLFVHAGTDPFGDNH*SIRAVNLHLKTFR 768
            ++ERK  VK   +   VP+N+   S  S   P E                 G F G + +  S R +  IG+     FL+ FRFK WW  Q +G  GS++ +ETQ++L+E  E                Y V +P+IE  FR+      ND +++  ESG +  + S+F+   +VH   +P+     +  A+ +HL +FR
Sbjct:   21 LSERKFKVKGFPLFHDVPENVSFRSFSSICKPSESNAPPSLLQKVLAYSHKGGFFGFSHETPSDRLMNSIGSFNGKDFLSIFRFKTWWSTQWIGKSGSDLQMETQWILIEVPETKS-------------YVVIIPIIEKCFRSALFPGFNDHVKIIAESGSTKVKESTFNSIAYVHFSENPYDLMKEAYSAIRVHLNSFR 207          

HSP 2 Score: 39.2762 bits (90), Expect = 7.175e-23
Identity = 14/20 (70.00%), Postives = 16/20 (80.00%), Query Frame = 3
Query:  777 EKKLRGIVDYFGWCTWDAFY 836
            EK +  +VD FGWCTWDAFY
Sbjct:  211 EKTIPNLVDKFGWCTWDAFY 230          
The following BLAST results are available for this feature:
BLAST of EY720545 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 8
Match NameE-valueIdentityDescription
RFS6_ARATH1.288e-8367.01Probable galactinol--sucrose galactosyltransferase... [more]
RFS2_ARATH5.613e-5150.26Probable galactinol--sucrose galactosyltransferase... [more]
RFS1_ARATH1.339e-4445.13Probable galactinol--sucrose galactosyltransferase... [more]
RFS5_ARATH3.534e-3335.35Probable galactinol--sucrose galactosyltransferase... [more]
RFS_ORYSJ3.808e-3235.05Galactinol--sucrose galactosyltransferase OS=Oryza... [more]
RFS_PEA1.124e-2730.81Galactinol--sucrose galactosyltransferase OS=Pisum... [more]
RFS4_ARATH6.710e-2429.67Probable galactinol--sucrose galactosyltransferase... [more]
STSYN_PEA7.175e-2329.50Stachyose synthase OS=Pisum sativum GN=STS1 PE=1 S... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-703-010-H08-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720545 ID=EY720545; Name=EY720545; organism=Citrus sinensis; type=EST; length=896bp
CCACGCGTCCGCGTTCACATCGTGCTCTCTTAACAGCATCTCATTCTCAA
GCTCAAAATCAAAACTCGTCGTTTTAACCAAGAAGCATTCTGATTCTGAT
ATTCTTCCAATCCTTCATTCTCGGTATTCACTTTTAAGAGAGACGAGCTA
ATTACACCTCGAAAGAAGCTTCAAGAAGAAGAAGAAGAAGTTAAAGAGAT
GACGATCAAACCAGTAGTTAGGATCGCCGAGAGGAAGCTAATTGTAAAGG
ATCGTACGATCCTTACCGGAGTGCCGGACAATTTGATCACGACGTCCGGT
TCGACTTCCGGTCCCGTCGAGGGAGTCTTCATTGGCGCGGCTTTCGATGA
AGAAAGCAGCAGGCACGTGCTCCCCATCGGGGCTTTGCGTGACATTCGTT
TCTTGGCCTGTTTCAGGTTCAAGTTGTGGTGGATGGCTCAGAAAATGGGC
GACCATGGCAGTGAAATCCCACTCGAGACTCAGTTCTTATTGGTGGAAAC
CAAAGAGGGGTCCCACATCGAATCGAACGATGGAAACGAAGACAATCAGA
TCGTCTACACTGTTTTCCTCCCTCTAATTGAAGGCTCATTCCGCGCGTGT
NTGCAAGGAAATGCAAACGACGAGCTCGAGTTGTGTTTAGAAAGCGGCGA
CTCCGACACCCAAGCGTCGTCGTTTAGTCACTCTTTGTTCGTCCACGCCG
GCACAGATCCTTTCGGGGACAATCACTGAAGCATCAGGGCAGTTAATTTA
CATCTCAAAACCTTCCGTCACGACACGAAAAAAAGTTGCGGGGAATCGTG
GACTATTTCGGGTGGTGCACGTGGGACGCATTTTACAAGAAGTACTCAGG
AGAGCCGTGGAGGCGGGCCCAACAGTTCCGCCAAGGTGGGACCCTC
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