EY720541

Overview
NameEY720541
Unique NameEY720541
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length875
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720541 vs. ExPASy Swiss-Prot
Match: AFC3_ARATH (Serine/threonine-protein kinase AFC3 OS=Arabidopsis thaliana GN=AFC3 PE=2 SV=2)

HSP 1 Score: 97.8265 bits (242), Expect = 9.975e-39
Identity = 46/76 (60.53%), Postives = 59/76 (77.63%), Query Frame = 3
Query:  198 MEQERTTKRRRLAWDVAPSEAEAQRALVVGHEGATAAAAKHVSPPRRDDDREGHYVFNLGENLTPRYKILSKMGEG 425
            M++ER  KR R+ WD AP+E EA+RA++ GH     +  + +SPP RDDDR+GHYVF+L +NLTPRYKILSKMGEG
Sbjct:    9 MDKERVRKRPRMTWDEAPAEPEAKRAVIKGH----GSDGRILSPPLRDDDRDGHYVFSLRDNLTPRYKILSKMGEG 80          

HSP 2 Score: 84.3445 bits (207), Expect = 9.975e-39
Identity = 42/68 (61.76%), Postives = 48/68 (70.59%), Query Frame = 2
Query:  512 TFGRVLECXDRQTQEXXXXXXXXXXXKYRDAAMIEIDVLQHLA*NDKGGSSHCVQIRNWFDXRHHICI 715
            TFGRVLEC DR T+E           KYRDAAMIEIDVLQ L  +DK G + CVQ++NWFD R+HICI
Sbjct:   81 TFGRVLECWDRDTKEYVAIKIIRSIKKYRDAAMIEIDVLQKLVKSDK-GRTRCVQMKNWFDYRNHICI 147          
BLAST of EY720541 vs. ExPASy Swiss-Prot
Match: AFC2_ARATH (Serine/threonine-protein kinase AFC2 OS=Arabidopsis thaliana GN=AFC2 PE=1 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 1.002e-31
Identity = 40/68 (58.82%), Postives = 49/68 (72.06%), Query Frame = 2
Query:  512 TFGRVLECXDRQTQEXXXXXXXXXXXKYRDAAMIEIDVLQHLA*NDKGGSSHCVQIRNWFDXRHHICI 715
            TFG+VLEC DR+ +E           KYR+AAMIEI++LQ L  +DKGG + CVQIRNWFD R+HICI
Sbjct:  108 TFGQVLECWDRERKEMVAVKIVRGVKKYREAAMIEIEMLQQLGKHDKGG-NRCVQIRNWFDYRNHICI 174          

HSP 2 Score: 76.2554 bits (186), Expect = 1.002e-31
Identity = 41/91 (45.05%), Postives = 52/91 (57.14%), Query Frame = 3
Query:  210 RTTKRRRLAWDVAPSEAEAQRALVVGHE----------GATA---------AAAKHVSPPRRDDDREGHYVFNLGENLTPRYKILSKMGEG 425
            R  KR RL WDV P   +AQ  +  G E          GA +           A++ SPP R+DD++GHY+F LG++LTPRYKI SKMGEG
Sbjct:   17 RPRKRARLGWDVLPQATKAQVGMFCGQEIGNISSFASSGAPSDNSSSLCVKGVARNGSPPWREDDKDGHYIFELGDDLTPRYKIYSKMGEG 107          
BLAST of EY720541 vs. ExPASy Swiss-Prot
Match: AFC1_ARATH (Serine/threonine-protein kinase AFC1 OS=Arabidopsis thaliana GN=AFC1 PE=2 SV=2)

HSP 1 Score: 83.5741 bits (205), Expect = 1.640e-15
Identity = 46/84 (54.76%), Postives = 54/84 (64.29%), Query Frame = 2
Query:  470 DTACPIEQLASIVX--TFGRVLECXDRQTQEXXXXXXXXXXXKYRDAAMIEIDVLQHLA*NDKGGSSHCVQIRNWFDXRHHICI 715
            DT  P  Q+ S +   TFG+VLEC D + +E           KYR+AAMIEIDVLQ L  +D GG S CVQIRNWFD R+HICI
Sbjct:  109 DTLTPRYQILSKMGEGTFGQVLECFDNKNKEVVAIKVIRSINKYREAAMIEIDVLQRLTRHDVGG-SRCVQIRNWFDYRNHICI 191          

HSP 2 Score: 67.781 bits (164), Expect = 9.313e-11
Identity = 46/122 (37.70%), Postives = 57/122 (46.72%), Query Frame = 3
Query:  120 SKLLRSFVLQILRLKIIQRNNK*QTMMEQERTTKRRRLAWDVAPS-------EAEAQRALVVGHEGATAAAAKHV-------------SPPRRDDDREGHYVFNLGENLTPRYKILSKMGEG 425
            S + R     I  +   QRN +    +  +R  KR RL WD AP            Q  L  G E A+      V             SPP R DD++GHYVF +G+ LTPRY+ILSKMGEG
Sbjct:    3 SSVYRDKASSIAMILETQRNVEFPHRIVDKRPRKRPRLTWDAAPPLLPPPPPPTVFQPPLYYGPEFASGLVPNFVYPNMFYNGLPRQGSPPWRPDDKDGHYVFVVGDTLTPRYQILSKMGEG 124          
BLAST of EY720541 vs. ExPASy Swiss-Prot
Match: LKH1_SCHPO (Dual specificity protein kinase lkh1 OS=Schizosaccharomyces pombe GN=lkh1 PE=1 SV=3)

HSP 1 Score: 63.5438 bits (153), Expect = 2.076e-11
Identity = 28/68 (41.18%), Postives = 43/68 (63.24%), Query Frame = 2
Query:  512 TFGRVLECXDRQTQEXXXXXXXXXXXKYRDAAMIEIDVLQHLA*NDKGGSSHCVQIRNWFDXRHHICI 715
            TFG+V++C D+ T             KYR+A++IE+ VLQ +A +D    + C+Q+R++FD R HICI
Sbjct:  372 TFGKVIQCYDQSTGRHCAIKVTRAIPKYREASLIELRVLQTIAHSDPTNENKCIQLRDYFDYRKHICI 439          

HSP 2 Score: 26.5646 bits (57), Expect = 2.076e-11
Identity = 20/69 (28.99%), Postives = 26/69 (37.68%), Query Frame = 3
Query:  219 KRRRLAWDVAPSEAEAQRALVVGHEGATAAAAKHVSPPRRDDDREGHYVFNLGENLTPRYKILSKMGEG 425
            KR+R AW   P   +  R  V      TA        P   DD +GHY          RY ++  +G G
Sbjct:  312 KRKRAAW---PPYKKVDRVNVPVVHDTTAF------DPSTFDDDDGHYKVVPNSKFANRYTVVRLLGHG 371          
BLAST of EY720541 vs. ExPASy Swiss-Prot
Match: CLK2_HUMAN (Dual specificity protein kinase CLK2 OS=Homo sapiens GN=CLK2 PE=1 SV=1)

HSP 1 Score: 51.6026 bits (122), Expect = 4.583e-11
Identity = 26/69 (37.68%), Postives = 39/69 (56.52%), Query Frame = 2
Query:  512 TFGRVLECXD-RQTQEXXXXXXXXXXXKYRDAAMIEIDVLQHLA*NDKGGSSHCVQIRNWFDXRHHICI 715
            TFGRV++C D R+              KY++AA +EI+VL+ +   D    + CVQ+ +WFD   H+CI
Sbjct:  173 TFGRVVQCVDHRRGGARVALKIIKNVEKYKEAARLEINVLEKINEKDPDNKNLCVQMFDWFDYHGHMCI 241          

HSP 2 Score: 37.3502 bits (85), Expect = 4.583e-11
Identity = 14/29 (48.28%), Postives = 23/29 (79.31%), Query Frame = 3
Query:  339 DDDREGHYVFNLGENLTPRYKILSKMGEG 425
            +DD EGH ++++G+ L  RY+I+S +GEG
Sbjct:  144 EDDAEGHLIYHVGDWLQERYEIVSTLGEG 172          
The following BLAST results are available for this feature:
BLAST of EY720541 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
AFC3_ARATH9.975e-3960.53Serine/threonine-protein kinase AFC3 OS=Arabidopsi... [more]
AFC2_ARATH1.002e-3158.82Serine/threonine-protein kinase AFC2 OS=Arabidopsi... [more]
AFC1_ARATH1.640e-1554.76Serine/threonine-protein kinase AFC1 OS=Arabidopsi... [more]
LKH1_SCHPO2.076e-1141.18Dual specificity protein kinase lkh1 OS=Schizosacc... [more]
CLK2_HUMAN4.583e-1137.68Dual specificity protein kinase CLK2 OS=Homo sapie... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-703-010-H03-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720541 ID=EY720541; Name=EY720541; organism=Citrus sinensis; type=EST; length=875bp
AGACAATCGTCACATTCGCCCAAAATATTCCCCCAATGCATAGGAACCCT
AATTTCCGAATGCTACCGTCATATCATCTCTCGCACTCTTATAATTCTGT
TCGAATTTTCTACTAATATTCAAAACTATTGAGGAGTTTTGTGCTGCAGA
TACTTAGGTTAAAAATCATACAAAGGAATAATAAATAGCAAACGATGATG
GAGCAGGAGCGAACCACTAAACGACGTCGGCTCGCTTGGGACGTGGCGCC
ATCGGAGGCAGAGGCGCAACGGGCTCTGGTGGTGGGCCATGAAGGGGCTA
CGGCGGCGGCTGCAAAACACGTGTCGCCGCCGAGAAGGGACGATGATCGT
GAGGGACATTACGTTTTTAATCTCGGCGAAAATCTCACCCCCAGATATAA
AATACTTAGCAAAATGGGTGAAGGTTAGCTGTCGAGTCCCATGCTGTCTA
CGAGATCTTATGTNTTTGTGATACTGCTTGTCCCATTGAGCAACTTGCTA
GTATTGTANGCACATTTGGCCGTGTTTTGGAATGTNGGGACCGTCAAACA
CAGGAGCGTGTGGNCATCANGGTAGTCAGAAGTATACGCAAGTACCGTGA
TGCTGCAATGATTGAAATCGATGTTCTTCAGCATCTTGCNTAAAATGACA
AAGGCGGCAGCTCACATTGTGTGCAGATTCGAAATTGGTTTGATNATCGC
CATCATATTTGTATTGGCTTGGGTGGTCTNACCCATGTGATTGTGGAATT
GTTGGTTTGTTTTTTATTCAAGCTTTGCACGGTTGAGCGTTATTCCCACA
CATTAAAACCTGGAACCTTTGGCAATAATGAAAAGGCGTTGGGTCCTCTG
CCCAACCTTTTATCCAAGGGCCGCC
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