EY720538

Overview
NameEY720538
Unique NameEY720538
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length874
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720538 vs. ExPASy Swiss-Prot
Match: NUD15_ARATH (Nudix hydrolase 15, mitochondrial OS=Arabidopsis thaliana GN=NUDT15 PE=1 SV=2)

HSP 1 Score: 126.716 bits (317), Expect = 1.680e-28
Identity = 73/141 (51.77%), Postives = 91/141 (64.54%), Query Frame = 3
Query:   75 SERLETLVQRLRLYNERHQNPVTEREAVDS-QDSYSVAVSST-----------------KKRAAVLVCLFEGNDGDLRVFLTKRSSNLSSHSGEVALPGGKREENDADDAGTALREAKEDIGLDPSLVNVVTSLDPLGTKN 443
            S RL  L Q+LR Y     +   + E + + Q++    VS                    KRAAVL+CLFEG+DGDLRV LTKRSS LS+HSGEV+LPGGK EE+D DD  TA REA+E+IGLDPSLV+VVTSL+P  +K+
Sbjct:   40 SSRLAALAQQLRQYKPPPSSSFDDSEEMQTDQETAGKVVSQVGFQESIAPLSKDPDRFKPKRAAVLICLFEGDDGDLRVILTKRSSKLSTHSGEVSLPGGKAEEDDKDDGMTATREAEEEIGLDPSLVDVVTSLEPFLSKH 180          
BLAST of EY720538 vs. ExPASy Swiss-Prot
Match: NUD22_ARATH (Nudix hydrolase 22, chloroplastic OS=Arabidopsis thaliana GN=NUDT22 PE=2 SV=2)

HSP 1 Score: 123.25 bits (308), Expect = 1.857e-27
Identity = 72/132 (54.55%), Postives = 87/132 (65.91%), Query Frame = 3
Query:   75 SERLETLVQRLRLYNERHQNPVTEREA--------------VDSQDSYSVAVSSTKKRAAVLVCLFEGNDGDLRVFLTKRSSNLSSHSGEVALPGGKREENDADDAGTALREAKEDIGLDPSLVNVVTSLDP 428
            S RL  L Q+LR+Y     +   ERE               V  Q+S +  V    K+AAVL+CLFEG+DGDLRV LTKRSS LS+HSGEV+LPGGK EE+D DD  TA REA+E+IGLDPSLV+VV  L+P
Sbjct:   19 SSRLLALAQQLRVYKPPLSSSFDEREELLAYKESTRKSITHVGFQESMA-PVRFRPKKAAVLICLFEGDDGDLRVILTKRSSTLSTHSGEVSLPGGKAEEHDKDDGITATREAEEEIGLDPSLVDVVAFLEP 149          
BLAST of EY720538 vs. ExPASy Swiss-Prot
Match: NUD11_ARATH (Nudix hydrolase 11 OS=Arabidopsis thaliana GN=NUDT11 PE=1 SV=2)

HSP 1 Score: 100.138 bits (248), Expect = 1.684e-20
Identity = 51/83 (61.45%), Postives = 63/83 (75.90%), Query Frame = 3
Query:  201 KRAAVLVCLFEGNDGD---LRVFLTKRSSNLSSHSGEVALPGGKREENDADDAGTALREAKEDIGLDPSLVNVVTSLDPLGTK 440
            K +AVLVCL++    D   LRV LTKRS+ LSSH GEVALPGGKR++ D DD  TALREA+E+IGLDPSLV +++ L+P   K
Sbjct:   32 KSSAVLVCLYQEQREDKNELRVILTKRSTTLSSHPGEVALPGGKRDQEDKDDIATALREAREEIGLDPSLVTIISVLEPFVNK 114          
The following BLAST results are available for this feature:
BLAST of EY720538 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
NUD15_ARATH1.680e-2851.77Nudix hydrolase 15, mitochondrial OS=Arabidopsis t... [more]
NUD22_ARATH1.857e-2754.55Nudix hydrolase 22, chloroplastic OS=Arabidopsis t... [more]
NUD11_ARATH1.684e-2061.45Nudix hydrolase 11 OS=Arabidopsis thaliana GN=NUDT... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-703-010-G12-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720538 ID=EY720538; Name=EY720538; organism=Citrus sinensis; type=EST; length=874bp
CCACGCGTCGCGGACGCGTGGGCGGACGCGTGGGCGGACGCGTGGGCGGA
CGCGTGGGCGGACGCGTGGGTCGATCTGAAAGACTTGAAACACTAGTCCA
GCGGCTTCGTCTCTACAATGAGAGACACCAGAACCCTGTAACTGAAAGAG
AAGCTGTGGATTCTCAAGACTCATATTCTGTTGCAGTATCTTCAACCAAG
AAGAGAGCAGCAGTTCTTGTTTGTCTTTTTGAAGGAAATGATGGGGATCT
ACGTGTATTCCTCACTAAGCGATCCTCGAATCTGTCTTCTCACTCGGGGG
AAGTTGCATTGCCAGGTGGGAAAAGGGAGGAAAACGATGCTGATGATGCG
GGGACTGCTTTGAGGGAGGCGAAGGAGGACATTGGCTTGGACCCTTCTCT
TGTCAATGTGGTCACCAGTCTGGACCCGCTGGGTACCAAGAATGGAGTAG
TAGGAGTGCCAGTGATGGGAGGGCGTCCTGAGCGAGACGCCGTGCTGCCG
GCGGCGGGTTACCGTGAAGGACATGCCATATGTGGTGGCGCCATGCGAAA
TGTCTCGAGCGGACGAGAACACCGAGACGGGAGGGACGGGATGGGAGGGG
CTCGCAGGAGTGGCCCCCCGCGGTGGTAGTATGAAGGATACGGCCGCAGA
TCTGTCATAGGGGCCTGTCCCGCGGGGTCGGGGGGGGCCGGGGCGGCGGG
CGGGGTGGGGGGGGTTCGGGGTGGCGGAAGGGGGGGGTTGTGCTGGGCGG
CCGGTGGGGGGCGCGGCGGGGGACATGAAGGGGTAGGGGTGTGAGGGAAG
TCGCGGGTGGGGTGGGGGAGGGTGTGCCGGGTGGGGTGGGTGGTGGGTCG
GGGGTGGGGGGTAGGCGTGGGGGC
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