EY720535

Overview
NameEY720535
Unique NameEY720535
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length878
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720535 vs. ExPASy Swiss-Prot
Match: WDR91_XENTR (WD repeat-containing protein 91 OS=Xenopus tropicalis GN=wdr91 PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.707e-12
Identity = 37/101 (36.63%), Postives = 64/101 (63.37%), Query Frame = 3
Query:  273 MQYAEELVREFLVFRGFTNTLQAFEKELSTDIGKGFQVDKILNLIFSVYITNFQAEKLVGLLSFF-KQCVSSSETVLTATLAKLEISILRYYIVHALQSGR 572
            ++  ++LV+E+L FRGFTNTL+ FE ++  D  KGF+VD+I+  +   ++ ++    LV   ++  ++  S  E V   T+ KL+ S+ RYY+V+ +QS R
Sbjct:    5 VELTDDLVKEYLTFRGFTNTLKYFEVDIKADKDKGFRVDRIVEQLLQ-FVQSYDLNGLVEYWAYLERRLFSRLEDVYRPTIHKLKTSLFRYYLVYTIQSSR 104          
BLAST of EY720535 vs. ExPASy Swiss-Prot
Match: WDR91_RAT (WD repeat-containing protein 91 OS=Rattus norvegicus GN=Wdr91 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.171e-11
Identity = 37/106 (34.91%), Postives = 64/106 (60.38%), Query Frame = 3
Query:  267 ENMQYAEELVREFLVFRGFTNTLQAFEKELSTDIGKGFQVDKILNLIFSVYITNFQAEKLVGLLSFF----KQCVSSSETVLTATLAKLEISILRYYIVHALQSGR 572
            E ++  +ELVRE+L+FRGFT+TL+  + E+  D  KGF+VDKI++ +  +     Q   L  L  ++    ++  S  E +   T+ KL+ S+ R+Y+V+ +Q+ R
Sbjct:    3 EAVERTDELVREYLLFRGFTHTLRQLDAEIKADKEKGFRVDKIVDQLQQL----MQVYDLAALRDYWSYLERRLFSRLEDIYRPTINKLKTSLFRFYLVYTIQTNR 104          
BLAST of EY720535 vs. ExPASy Swiss-Prot
Match: WDR91_MOUSE (WD repeat-containing protein 91 OS=Mus musculus GN=Wdr91 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.171e-11
Identity = 37/106 (34.91%), Postives = 64/106 (60.38%), Query Frame = 3
Query:  267 ENMQYAEELVREFLVFRGFTNTLQAFEKELSTDIGKGFQVDKILNLIFSVYITNFQAEKLVGLLSFF----KQCVSSSETVLTATLAKLEISILRYYIVHALQSGR 572
            E ++  +ELVRE+L+FRGFT+TL+  + E+  D  KGF+VDKI++ +  +     Q   L  L  ++    ++  S  E +   T+ KL+ S+ R+Y+V+ +Q+ R
Sbjct:    3 EAVERTDELVREYLLFRGFTHTLRQLDAEIKADKEKGFRVDKIVDQLQQL----MQVYDLAALRDYWSYLERRLFSRLEDIYRPTINKLKTSLFRFYLVYTIQTNR 104          
BLAST of EY720535 vs. ExPASy Swiss-Prot
Match: WDR91_HUMAN (WD repeat-containing protein 91 OS=Homo sapiens GN=WDR91 PE=1 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.171e-11
Identity = 37/106 (34.91%), Postives = 64/106 (60.38%), Query Frame = 3
Query:  267 ENMQYAEELVREFLVFRGFTNTLQAFEKELSTDIGKGFQVDKILNLIFSVYITNFQAEKLVGLLSFF----KQCVSSSETVLTATLAKLEISILRYYIVHALQSGR 572
            E ++  +ELVRE+L+FRGFT+TL+  + E+  D  KGF+VDKI++ +  +     Q   L  L  ++    ++  S  E +   T+ KL+ S+ R+Y+V+ +Q+ R
Sbjct:    3 EAVERTDELVREYLLFRGFTHTLRQLDAEIKADKEKGFRVDKIVDQLQQL----MQVYDLAALRDYWSYLERRLFSRLEDIYRPTIHKLKTSLFRFYLVYTIQTNR 104          
BLAST of EY720535 vs. ExPASy Swiss-Prot
Match: WDR91_BOVIN (WD repeat-containing protein 91 OS=Bos taurus GN=WDR91 PE=2 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 9.366e-11
Identity = 37/106 (34.91%), Postives = 64/106 (60.38%), Query Frame = 3
Query:  267 ENMQYAEELVREFLVFRGFTNTLQAFEKELSTDIGKGFQVDKILNLIFSVYITNFQAEKLVGLLSFF----KQCVSSSETVLTATLAKLEISILRYYIVHALQSGR 572
            E ++  +E+VRE+L+FRGFT+TL+  + E+  D  KGF+VDKI++ +  +     Q   L  L  ++    ++  S  E V   T+ KL+ S+ R+Y+V+ +Q+ R
Sbjct:    3 EAVERTDEMVREYLLFRGFTHTLRQLDAEIKADKEKGFRVDKIVDQLQQL----MQVYDLAALRDYWNYLERRLFSRLEDVYRPTINKLKTSLFRFYLVYTIQTNR 104          
The following BLAST results are available for this feature:
BLAST of EY720535 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
WDR91_XENTR1.707e-1236.63WD repeat-containing protein 91 OS=Xenopus tropica... [more]
WDR91_RAT7.171e-1134.91WD repeat-containing protein 91 OS=Rattus norvegic... [more]
WDR91_MOUSE7.171e-1134.91WD repeat-containing protein 91 OS=Mus musculus GN... [more]
WDR91_HUMAN7.171e-1134.91WD repeat-containing protein 91 OS=Homo sapiens GN... [more]
WDR91_BOVIN9.366e-1134.91WD repeat-containing protein 91 OS=Bos taurus GN=W... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-703-010-G08-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720535 ID=EY720535; Name=EY720535; organism=Citrus sinensis; type=EST; length=878bp
CCACGCGTCCGGAGGATTTAAGCGCCAAGTTCGTAAATCATTGACGAAAT
TGTCCTACCGAAAATCCCTAATCGGAAGAAATCGATTCAATCCGTTTCCT
CACAGCAATTTCAGTCCGTACGGCTCAGTAATTTACAGTTCCCCTCCATT
TCTATACGGGTGTTGCAGCAAATGTGAAGAGATGTTTTTCAGTGAACGGG
TCTACAGGGTGTTGCAGCAAATGTGAAGAGATGTCTTTTAGTGAACAGGT
CTAGTATGATAAGATGGAGAACATGCAATATGCTGAGGAGCTGGTGAGGG
AATTTCTTGTGTTTAGAGGGTTTACGAATACTTTGCAAGCTTTTGAGAAG
GAATTAAGCACGGATATAGGTAAAGGATTTCAAGTGGATAAGATATTAAA
CTTAATCTTCTCGGTGTATATTACCAACTTTCAAGCTGAAAAATTGGTTG
GTCTGCTGAGTTTCTTCAAGCAGTGCGTTTCATCATCTGAGACCGTACTC
ACTGCTACTCTTGCAAAACTAGAGATCTCGATTCTCCGCTACTATATAGT
TCATGCCTTACAATCAGGAAGAAAAGACAAAGTTGTAAAGTTTTTTTGGA
ACAAATGGAAATGATCTGTTGCTGAGGGGGGTCAGACTGGACTTCATGGG
TTGGTGGGGGTTGGTCTCTAATNCTTNTAATTATNTGGTTGTTTATTTTT
ATGAAAGTAAAATATAGTCCATGGTTAAATAATGGGCACGCCAATGGCAC
CATTTCCTTACTTGAAAGACTCCAAGGTTTGGATCCCCCAATTTCGCATT
ATATTTTACGAAAAGAATGGTTCCGAAGCTTGGGGACTTTCCTGGTGAGG
GAACTTTGTTAGGGGAGATCTGCAATGG
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