EY720531

Overview
NameEY720531
Unique NameEY720531
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length522
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1066 contig Csv1_Contig1066:299..820. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EY720531 vs. ExPASy Swiss-Prot
Match: G3PC_MAGLI (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Magnolia liliiflora GN=GAPC PE=2 SV=1)

HSP 1 Score: 236.884 bits (603), Expect = 4.433e-62
Identity = 117/144 (81.25%), Postives = 122/144 (84.72%), Query Frame = 1
Query:   91 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMXVVGVNENELQPEL 522
            K+KIGINGFGRIGRLVARV LQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKD KTLLFGEKPVTVFGVRNPEEIPW ETGAE+VVESTGVFT               VIISAPSKDAPM VVGVNE+E +  +
Sbjct:    5 KIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDSKTLLFGEKPVTVFGVRNPEEIPWGETGAEFVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNEHEYKSNI 148          
BLAST of EY720531 vs. ExPASy Swiss-Prot
Match: G3P_ATRNU (Glyceraldehyde-3-phosphate dehydrogenase OS=Atriplex nummularia PE=2 SV=1)

HSP 1 Score: 235.343 bits (599), Expect = 1.290e-61
Identity = 116/146 (79.45%), Postives = 123/146 (84.25%), Query Frame = 1
Query:   85 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMXVVGVNENELQPEL 522
            M KVKIGINGFGRIGRLVARVILQ DD ELVA+NDPFITTDYMTYMFKYDSVHGQWKHHELKVKD+KTLLFGE+PVTVFG RNPEEIPW +TGA+YVVESTGVFT               VIISAPSKDAPM VVGVNE+E + EL
Sbjct:    1 MAKVKIGINGFGRIGRLVARVILQSDDCELVAINDPFITTDYMTYMFKYDSVHGQWKHHELKVKDEKTLLFGERPVTVFGNRNPEEIPWGQTGADYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNEHEYKSEL 146          
BLAST of EY720531 vs. ExPASy Swiss-Prot
Match: G3PC_PETHY (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Petunia hybrida GN=GAPC PE=2 SV=1)

HSP 1 Score: 233.802 bits (595), Expect = 3.753e-61
Identity = 114/146 (78.08%), Postives = 121/146 (82.88%), Query Frame = 1
Query:   85 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMXVVGVNENELQPEL 522
            M K+KIGINGFGRIGRLVARV LQRDDVELVAVNDPFI+ +YMTYMFKYDSVHGQWKHHELK KDDKTLLFGEKPVTVFG+RNPEEIPW E GA+YVVESTGVFT               VIISAPSKDAPM VVGVNE E + +L
Sbjct:    1 MAKIKIGINGFGRIGRLVARVALQRDDVELVAVNDPFISVEYMTYMFKYDSVHGQWKHHELKAKDDKTLLFGEKPVTVFGIRNPEEIPWGEAGADYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNEKEYKSDL 146          
BLAST of EY720531 vs. ExPASy Swiss-Prot
Match: G3PC_ARATH (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Arabidopsis thaliana GN=GAPC PE=2 SV=2)

HSP 1 Score: 233.032 bits (593), Expect = 6.401e-61
Identity = 111/144 (77.08%), Postives = 125/144 (86.81%), Query Frame = 1
Query:   91 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMXVVGVNENELQPEL 522
            K++IGINGFGRIGRLVARV+LQRDDVELVAVNDPFITT+YMTYMFKYDSVHGQWKH+ELK+KD+KTLLFGEKPVTVFG+RNPE+IPWAE GA+YVVESTGVFT               V+ISAPSKDAPM VVGVNE+E + +L
Sbjct:    5 KIRIGINGFGRIGRLVARVVLQRDDVELVAVNDPFITTEYMTYMFKYDSVHGQWKHNELKIKDEKTLLFGEKPVTVFGIRNPEDIPWAEAGADYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSKDAPMFVVGVNEHEYKSDL 148          
BLAST of EY720531 vs. ExPASy Swiss-Prot
Match: G3PC_RANAC (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Ranunculus acris GN=GAPC PE=2 SV=1)

HSP 1 Score: 230.335 bits (586), Expect = 4.149e-60
Identity = 112/145 (77.24%), Postives = 120/145 (82.76%), Query Frame = 1
Query:   88 GKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMXVVGVNENELQPEL 522
            GK+KIGINGFGRIGRLVARV L RDDVELVAVNDPFITTDYMTYMFKYD+VHGQWKHHELKVKD+KTLLFGEKPVTVFG RNPEEIPW ETGAE+VVESTGVFT               V+ISAPS DAPM VVGVN  E + ++
Sbjct:    3 GKIKIGINGFGRIGRLVARVALARDDVELVAVNDPFITTDYMTYMFKYDTVHGQWKHHELKVKDEKTLLFGEKPVTVFGCRNPEEIPWGETGAEFVVESTGVFTTKEKASAHLKGGAKKVVISAPSADAPMFVVGVNHTEYKSDI 147          
BLAST of EY720531 vs. ExPASy Swiss-Prot
Match: G3PC_SINAL (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Sinapis alba GN=GAPC PE=2 SV=2)

HSP 1 Score: 229.95 bits (585), Expect = 5.419e-60
Identity = 111/144 (77.08%), Postives = 124/144 (86.11%), Query Frame = 1
Query:   91 KVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMXVVGVNENELQPEL 522
            K+KIGINGFGRIGRLVARVILQR+DVELVAVNDPFITT+YMTYMFKYDSVHGQWKH+ELKVKD+KTLLFGEKPVTVFG+RNPE+IPW E GA++VVESTGVFT               V+ISAPSKDAPM VVGVNE+E + +L
Sbjct:    5 KIKIGINGFGRIGRLVARVILQRNDVELVAVNDPFITTEYMTYMFKYDSVHGQWKHNELKVKDEKTLLFGEKPVTVFGIRNPEDIPWGEAGADFVVESTGVFTDKDKAAAHLKGGAKKVVISAPSKDAPMFVVGVNEHEYKSDL 148          
BLAST of EY720531 vs. ExPASy Swiss-Prot
Match: G3PC_DIACA (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Dianthus caryophyllus GN=GAPC PE=3 SV=1)

HSP 1 Score: 229.95 bits (585), Expect = 5.419e-60
Identity = 113/146 (77.40%), Postives = 122/146 (83.56%), Query Frame = 1
Query:   85 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMXVVGVNENELQPEL 522
            M  +KIGINGFGRIGRLVARVILQR+D ELVAVNDPFITT+YMTYMFKYDSVHGQWKHH++KVKD+KTLLFGEK VTVFG RNPEEIPW  TGA+YVVESTGVFT               VIISAPSKDAPM VVGVNE+E +PEL
Sbjct:    1 MAPIKIGINGFGRIGRLVARVILQREDCELVAVNDPFITTEYMTYMFKYDSVHGQWKHHDIKVKDEKTLLFGEKAVTVFGNRNPEEIPWGGTGADYVVESTGVFTDKDKAAAHLKGGAKKVIISAPSKDAPMFVVGVNEHEYKPEL 146          
BLAST of EY720531 vs. ExPASy Swiss-Prot
Match: G3PC_CRAPL (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Craterostigma plantagineum GN=GAPC PE=2 SV=1)

HSP 1 Score: 228.024 bits (580), Expect = 2.059e-59
Identity = 113/146 (77.40%), Postives = 120/146 (82.19%), Query Frame = 1
Query:   85 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMXVVGVNENELQPEL 522
            M KVKIGINGFGRIGRLVARV L RDDVELVAVNDPFIT DYM YMFKYD+VHGQ+KHHELKVKD+KTLLFG+KPV VFG+RNPEEIPWAETGAEYVVESTGVFT               VIISAPSKDAPM VVGVNE    P++
Sbjct:    1 MAKVKIGINGFGRIGRLVARVALVRDDVELVAVNDPFITVDYMAYMFKYDTVHGQYKHHELKVKDEKTLLFGDKPVAVFGLRNPEEIPWAETGAEYVVESTGVFTEKEKAAAHLKGGAKKVIISAPSKDAPMFVVGVNEKTYTPDI 146          
BLAST of EY720531 vs. ExPASy Swiss-Prot
Match: G3PX_HORVU (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Hordeum vulgare GN=GAPC PE=2 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 7.825e-59
Identity = 109/141 (77.30%), Postives = 119/141 (84.40%), Query Frame = 1
Query:   85 MGKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMXVVGVNENE 507
            MGK+KIGINGFGRIGRLVARV LQ DDVELVAVNDPFITT+YMTYMFKYD+VHG WKH ++K+KDDKTLLFGEKPVTVFGVRNPEEIPW E GA+YVVESTGVFT               V+ISAPSKDAPM VVGVNE++
Sbjct:    1 MGKIKIGINGFGRIGRLVARVALQSDDVELVAVNDPFITTEYMTYMFKYDTVHGHWKHSDIKLKDDKTLLFGEKPVTVFGVRNPEEIPWGEAGADYVVESTGVFTDKDKAAAHLKGGAKKVVISAPSKDAPMFVVGVNEDK 141          
BLAST of EY720531 vs. ExPASy Swiss-Prot
Match: G3PC_GINBI (Glyceraldehyde-3-phosphate dehydrogenase, cytosolic OS=Ginkgo biloba PE=2 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 7.825e-59
Identity = 110/145 (75.86%), Postives = 119/145 (82.07%), Query Frame = 1
Query:   88 GKVKIGINGFGRIGRLVARVILQRDDVELVAVNDPFITTDYMTYMFKYDSVHGQWKHHELKVKDDKTLLFGEKPVTVFGVRNPEEIPWAETGAEYVVESTGVFTXXXXXXXXXXXXXXXVIISAPSKDAPMXVVGVNENELQPEL 522
            GK+KIGINGFGRIGRLVARV L RDD+ELVAVNDPFI+TDYMTYMFKYDSVHGQWK HE+KVKD  TLLFGEK VTVFG RNPEEIPW ETG EYVVESTGVFT               V+I+APSKDAPM VVGVNE+E +P+L
Sbjct:    5 GKIKIGINGFGRIGRLVARVALLRDDIELVAVNDPFISTDYMTYMFKYDSVHGQWKKHEVKVKDSNTLLFGEKAVTVFGCRNPEEIPWGETGVEYVVESTGVFTDKEKAAAHIKGGAKKVVITAPSKDAPMFVVGVNEHEYKPDL 149          
The following BLAST results are available for this feature:
BLAST of EY720531 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 319
Match NameE-valueIdentityDescription
G3PC_MAGLI4.433e-6281.25Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3P_ATRNU1.290e-6179.45Glyceraldehyde-3-phosphate dehydrogenase OS=Atripl... [more]
G3PC_PETHY3.753e-6178.08Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_ARATH6.401e-6177.08Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_RANAC4.149e-6077.24Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_SINAL5.419e-6077.08Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_DIACA5.419e-6077.40Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_CRAPL2.059e-5977.40Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PX_HORVU7.825e-5977.30Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]
G3PC_GINBI7.825e-5975.86Glyceraldehyde-3-phosphate dehydrogenase, cytosoli... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-703-010-G03-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720531 ID=EY720531; Name=EY720531; organism=Citrus sinensis; type=EST; length=522bp
CCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCAACTTTCTTCACCA
CTCTTTCACCGCTCAATTTCATCTCTCGAGAATCATGGGGAAGGTCAAGA
TCGGAATCAACGGATTCGGAAGAATTGGTAGGCTGGTGGCAAGAGTCATC
TTGCAGAGGGACGATGTTGAACTCGTTGCTGTTAATGATCCCTTTATCAC
AACCGATTACATGACATACATGTTTAAGTACGACAGTGTTCACGGTCAAT
GGAAGCACCATGAATTGAAGGTTAAGGACGATAAGACCCTTCTCTTTGGT
GAGAAGCCTGTCACTGTTTTCGGTGTTAGGAACCCAGAGGAGATCCCATG
GGCTGAGACTGGAGCCGAGTATGTTGTGGAGTCGACTGGAGTCTTTACTG
ACAAGGATAAGGCTGCTGCCCATTTGAAGGGTGGTGCTAAGAAAGTTATC
ATCTCAGCCCCCAGCAAGGATGCTCCTATGTNTGTTGTCGGTGTCAATGA
AAACGAGTTACAACCAGAGCTC
back to top