EY720504
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY720504 vs. ExPASy Swiss-Prot
Match: CH10C_ARATH (20 kDa chaperonin, chloroplastic OS=Arabidopsis thaliana GN=CPN21 PE=1 SV=2) HSP 1 Score: 212.616 bits (540), Expect = 2.448e-54 Identity = 118/203 (58.13%), Postives = 135/203 (66.50%), Query Frame = 1 Query: 124 MATAQLTASSIKVPARSLTSFDGLRPSSVKFASVG-GAPSQRSFRRLXXXXXXXXXPKYTSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTXLDISVKPXTQVIYSKYAGTELEFNGANHLI*GRRTVXGILETDENQDLRPLNDRSFHQVXXXXXXXXXXXXXXXXNXEKPPIGMVIAVEPG 729 MA QLTAS + + ARSL S DGLR SSVKF+S+ G Q FRRL PKYTSIKPLGDRVLVKIK EEKT GGI LPSTAQ+KPQ GEVVAVGEG+T+GK +DI+V Q+IYSKYAGTE+EFN HLI + GILET++ +DL+PLNDR F +V EKP IG VIAV PG Sbjct: 1 MAATQLTASPVTMSARSLASLDGLRASSVKFSSLKPGTLRQSQFRRLVVKAASVVAPKYTSIKPLGDRVLVKIKEAEEKTLGGILLPSTAQSKPQGGEVVAVGEGRTIGKNKIDITVPTGAQIIYSKYAGTEVEFNDVKHLILKEDDIVGILETEDIKDLKPLNDRVFIKVAEAEEKTAGGLLLTETTKEKPSIGTVIAVGPG 203
BLAST of EY720504 vs. ExPASy Swiss-Prot
Match: CH10C_SPIOL (20 kDa chaperonin, chloroplastic OS=Spinacia oleracea GN=CPN21 PE=2 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 6.915e-41 Identity = 97/218 (44.50%), Postives = 129/218 (59.17%), Query Frame = 1 Query: 124 MATAQLTASSIKVPARSLTSFDGLRPSS----VKFASVGGAPSQRSFRRLXXXXXXXXXPKYTSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTXLDISVKPXTQVIYSKYAGTELEFNGANHLI*GRRTVXGILETDENQDLRPLNDRSFHQVXXXXXXXXXXXXXXXXNXEKPPIGMVIAVEPGLXMRKVIGNSYP 765 MA LT++S + +L SF+GLR +S + + + + RSFR L KYTS+KPLGDRVL+K K VEEKT GIFLP+ AQ KPQ+GEVVA+G GK VG L ++VK +V+YSKY GTE+E +G++HLI + GILETD+ +DL+PLNDR +V + EKP G V+A PG+ + GN P Sbjct: 1 MAATHLTSTS-SLTINTLPSFEGLRSASGISKINVSVAYPSFTSRSFRGLVVRAASITTSKYTSVKPLGDRVLIKTKIVEEKTTSGIFLPTAAQKKPQSGEVVAIGSGKKVGDKKLPVAVKTGAEVVYSKYTGTEIEVDGSSHLIVKEDDIIGILETDDVKDLKPLNDRLLIKVAEVENKTSGGLLLAESSKEKPSFGTVVATGPGVLDEE--GNRIP 215
BLAST of EY720504 vs. ExPASy Swiss-Prot
Match: CH10_RHOMR (10 kDa chaperonin OS=Rhodothermus marinus GN=groS PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 2.165e-18 Identity = 43/95 (45.26%), Postives = 65/95 (68.42%), Query Frame = 1 Query: 304 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTXLDISVKPXTQVIYSKYAGTELEFNGANHLI*GRRTVXGILETDE 588 IKPL DRV++K + EEKT+ G+++P TA+ KPQ G V+AVG G+ T +++SVK +V+Y KYAGTE+ +G +LI + GI+E ++ Sbjct: 6 IKPLSDRVVIKPEPPEEKTESGLYIPDTAKEKPQRGTVIAVGPGRVENGTKIEMSVKEGDKVLYGKYAGTEITIDGEEYLIMRETDILGIIEEEK 100
BLAST of EY720504 vs. ExPASy Swiss-Prot
Match: CH10_THEPX (10 kDa chaperonin OS=Thermoanaerobacter sp. (strain X514) GN=groS PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 8.225e-18 Identity = 44/92 (47.83%), Postives = 63/92 (68.48%), Query Frame = 1 Query: 304 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTXLDISVKPXTQVIYSKYAGTELEFNGANHLI*GRRTVXGILE 579 +KPLGDRV+VK+ EE T GG+ LP TA+ KPQ GEVVAVG G+ + +++ VK +VI+SKYAGTE++ +G +L+ + I+E Sbjct: 3 LKPLGDRVVVKVIQAEEVTKGGVILPGTAKEKPQQGEVVAVGTGQYIDGKKVELEVKVGDRVIFSKYAGTEVKLDGEEYLLLRESDILAIIE 94
BLAST of EY720504 vs. ExPASy Swiss-Prot
Match: CH10_THEP3 (10 kDa chaperonin OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) GN=groS PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 8.225e-18 Identity = 44/92 (47.83%), Postives = 63/92 (68.48%), Query Frame = 1 Query: 304 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTXLDISVKPXTQVIYSKYAGTELEFNGANHLI*GRRTVXGILE 579 +KPLGDRV+VK+ EE T GG+ LP TA+ KPQ GEVVAVG G+ + +++ VK +VI+SKYAGTE++ +G +L+ + I+E Sbjct: 3 LKPLGDRVVVKVIQAEEVTKGGVILPGTAKEKPQQGEVVAVGTGQYIDGKKVELEVKVGDRVIFSKYAGTEVKLDGEEYLLLRESDILAIIE 94
BLAST of EY720504 vs. ExPASy Swiss-Prot
Match: CH10_THEBR (10 kDa chaperonin OS=Thermoanaerobacter brockii GN=groS PE=1 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 8.225e-18 Identity = 44/92 (47.83%), Postives = 63/92 (68.48%), Query Frame = 1 Query: 304 IKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTXLDISVKPXTQVIYSKYAGTELEFNGANHLI*GRRTVXGILE 579 +KPLGDRV+VK+ EE T GG+ LP TA+ KPQ GEVVAVG G+ + +++ VK +VI+SKYAGTE++ +G +L+ + I+E Sbjct: 3 LKPLGDRVVVKVIQAEEVTKGGVILPGTAKEKPQQGEVVAVGTGEYIDGKKVELEVKVGDRVIFSKYAGTEVKLDGEEYLLLRESDILAIIE 94
BLAST of EY720504 vs. ExPASy Swiss-Prot
Match: CH10_DESHY (10 kDa chaperonin OS=Desulfitobacterium hafniense (strain Y51) GN=groS PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 1.074e-17 Identity = 45/82 (54.88%), Postives = 59/82 (71.95%), Query Frame = 1 Query: 301 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTXLDISVKPXTQVIYSKYAGTELEFNGANHLI 546 +IKPLGDRV++K +EEKT GI +P TA+ KPQ GEVVAVG GK + + VK +VIYSKYAGTE++++G +LI Sbjct: 2 NIKPLGDRVVIKALPMEEKTKSGIIMPDTAKEKPQEGEVVAVGPGKMEKGERIVLDVKVGDRVIYSKYAGTEVKYDGQEYLI 83
BLAST of EY720504 vs. ExPASy Swiss-Prot
Match: CH10_DESHD (10 kDa chaperonin OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=groS PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 1.074e-17 Identity = 45/82 (54.88%), Postives = 59/82 (71.95%), Query Frame = 1 Query: 301 SIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTXLDISVKPXTQVIYSKYAGTELEFNGANHLI 546 +IKPLGDRV++K +EEKT GI +P TA+ KPQ GEVVAVG GK + + VK +VIYSKYAGTE++++G +LI Sbjct: 2 NIKPLGDRVVIKALPMEEKTKSGIIMPDTAKEKPQEGEVVAVGPGKMEKGERIVLDVKVGDRVIYSKYAGTEVKYDGQEYLI 83
BLAST of EY720504 vs. ExPASy Swiss-Prot
Match: CH10_SYNJB (10 kDa chaperonin OS=Synechococcus sp. GN=groS PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.403e-17 Identity = 47/95 (49.47%), Postives = 65/95 (68.42%), Query Frame = 1 Query: 298 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTXL-DISVKPXTQVIYSKYAGTELEFNGANHLI*GRRTVXGILE 579 +++KPLGDRVLVKI +EKT GGIFLP TA+ KPQ GEVVAVG GK + L + +K +V+YSKYAGTE++ +++ R + I++ Sbjct: 9 STLKPLGDRVLVKIAQQDEKTAGGIFLPDTAKEKPQVGEVVAVGPGKRNDEGKLIPMELKAGDKVLYSKYAGTEVKLGSDEYVLLAERDILAIVQ 103
BLAST of EY720504 vs. ExPASy Swiss-Prot
Match: CH10_SYNJA (10 kDa chaperonin OS=Synechococcus sp. (strain JA-3-3Ab) GN=groS PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.403e-17 Identity = 47/95 (49.47%), Postives = 65/95 (68.42%), Query Frame = 1 Query: 298 TSIKPLGDRVLVKIKTVEEKTDGGIFLPSTAQTKPQAGEVVAVGEGKTVGKTXL-DISVKPXTQVIYSKYAGTELEFNGANHLI*GRRTVXGILE 579 +++KPLGDRVLVKI +EKT GGIFLP TA+ KPQ GEVVAVG GK + L + +K +V+YSKYAGTE++ +++ R + I++ Sbjct: 9 STLKPLGDRVLVKIAQQDEKTAGGIFLPDTAKEKPQVGEVVAVGPGKRNDEGKLIPMELKAGDRVLYSKYAGTEVKLGSDEYVLLAERDILAIVQ 103 The following BLAST results are available for this feature:
BLAST of EY720504 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 345
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Sequences
The
following sequences are available for this feature:
EST sequence >EY720504 ID=EY720504; Name=EY720504; organism=Citrus sinensis; type=EST; length=897bpback to top |