EY720491

Overview
NameEY720491
Unique NameEY720491
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length893
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1456 contig Csv1_Contig1456:88..980. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of EY720491 vs. ExPASy Swiss-Prot
Match: GPT2_ARATH (Glucose-6-phosphate/phosphate translocator 2, chloroplastic OS=Arabidopsis thaliana GN=GPT2 PE=2 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 7.127e-14
Identity = 34/41 (82.93%), Postives = 36/41 (87.80%), Query Frame = 1 
Query:  196 PYPWWTSTLSLPCGSLMMLISWTTRIAEPPKTGLEFWKTLF 318
            PYPW TSTLSL CGSLMML+SW TRIA+ PKT LEFWKTLF
Sbjct:  123 PYPWLTSTLSLACGSLMMLVSWATRIADAPKTDLEFWKTLF 163
The following BLAST results are available for this feature:
BLAST of EY720491 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
GPT2_ARATH7.127e-1482.93Glucose-6-phosphate/phosphate translocator 2, chlo... [more]
back to top
Properties
Property NameValue
Genbank descriptionCS00-C3-703-010-C05-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720491 ID=EY720491; Name=EY720491; organism=Citrus sinensis; type=EST; length=893bp
CCACGCGTCCGACGCCTCACCACTCCCTCACCTCCACTCCCTCACAACAC
GCCTCACCACGGCCATCAACAGCGCCGCAAGTCGGCAATGATTAACGGCG
GCGGCTGAAGGAGTTCCTAGGCAACGATCAACGGCGGCACAAGCACGGGC
TGATCTCCTTCTTCGGCAACGATCAACGGCGGGGTTGCTGATCTTCCCTA
TCCTTGGTGGACTTCAACTCTGTCCCTGCCTTGTGGGTCGTTGATGATGT
TGATTTCATGGACTACCAGAATTGCGGAGCCTCCAAAGACTGGTCTTGAG
TTTTGGAAGACTTTGTTTCTCGGTTTGTGCTGGTTTTGTTGATGAGTACA
TGTTTATTTGGATCTGGATTTCAGAGCCCTGGAAAACGGATTTTCTAAAT
ACCAGTGGCGTGGCCTCGTGGGTCCTCAAATTATTCAAATGGGCATTTCA
TCGAACAGTGGATATACTCGGCATCTGCACTTGGAAGACGCGTTCAAAAG
CTCTANATCATGTTTAAGTCGACCAAAAAGACAAAGGAAAATGCTTCTCA
GCGAGAATGCTGAGAGAATGCCGAGAGAAACGGCCCCACCCCCCCACACG
TGAACTTTTGTCCCTTTTGTTTTTTCTTGCTACTTTTGCTTTTTCCACAT
TTTCTACTCTTTCTCCCCCACATTTGATTTCTACTGTCGANNAGACTATT
GGANGTTGANAATTTTCTCTCATTTCACAAGTAGAGAGAGCGGCATTAGG
GCAGGAGCCAGGAGTATTTGCTCATTCACGTGAAAGATTGAATTGGGGTT
TTTTTCTCATTTTAAAAACAGGGAAACGGCATTACANCCTAACAGGAGTA
GTCCTCACCACCTGGAGTTAAACCCCAACTGGGTAAAATGATT
back to top