EY720483

Overview
NameEY720483
Unique NameEY720483
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length817
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of EY720483 vs. ExPASy Swiss-Prot
Match: UXS1_DANRE (UDP-glucuronic acid decarboxylase 1 OS=Danio rerio GN=uxs1 PE=2 SV=2)

HSP 1 Score: 246.899 bits (629), Expect = 1.009e-64
Identity = 122/192 (63.54%), Postives = 147/192 (76.56%), Query Frame = 1
Query:   28 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARVLITSTSEVYGDPLQHPQKETYWGHRHPIGVRSCYHEGKRXAETLNMDYTEERRGS*DC*N-FHTYVTRMCIHDCPVVNNFVAQA 600
            RI++TGGAGFVGSHL D+L+  G  V VVDNFFTGRK NV H  G+ NFELI HDVVEPL +EVDQIYHLA PASP +Y +NP+KT+KTN +GTLNMLGLAKRVGAR+L+ STSEVYGDP  HPQ E YWGH +PIG R+CY EGKR AET+   Y ++          F+T+ +RM ++D  VV+NF+ QA
Sbjct:   88 RILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQNEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGSRMHMNDGRVVSNFILQA 279          
BLAST of EY720483 vs. ExPASy Swiss-Prot
Match: UXS1_XENTR (UDP-glucuronic acid decarboxylase 1 OS=Xenopus tropicalis GN=uxs1 PE=2 SV=1)

HSP 1 Score: 246.128 bits (627), Expect = 1.721e-64
Identity = 122/192 (63.54%), Postives = 146/192 (76.04%), Query Frame = 1
Query:   28 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARVLITSTSEVYGDPLQHPQKETYWGHRHPIGVRSCYHEGKRXAETLNMDYTEERRGS*DC*N-FHTYVTRMCIHDCPVVNNFVAQA 600
            RI++TGGAGFVGSHL D+L+  G  V VVDNFFTGRK NV H  G+ NFELI HDVVEPL +EVDQIYHLA PASP +Y +NP+KT+KTN +GTLNMLGLAKRVGAR+L+ STSEVYGDP  HPQ E YWGH +PIG R+CY EGKR AET+   Y ++          F+T+  RM ++D  VV+NF+ QA
Sbjct:   91 RILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEEYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQA 282          
BLAST of EY720483 vs. ExPASy Swiss-Prot
Match: UXS1_RAT (UDP-glucuronic acid decarboxylase 1 OS=Rattus norvegicus GN=Uxs1 PE=1 SV=1)

HSP 1 Score: 246.128 bits (627), Expect = 1.721e-64
Identity = 122/192 (63.54%), Postives = 146/192 (76.04%), Query Frame = 1
Query:   28 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARVLITSTSEVYGDPLQHPQKETYWGHRHPIGVRSCYHEGKRXAETLNMDYTEERRGS*DC*N-FHTYVTRMCIHDCPVVNNFVAQA 600
            RI++TGGAGFVGSHL D+L+  G  V VVDNFFTGRK NV H  G+ NFELI HDVVEPL +EVDQIYHLA PASP +Y +NP+KT+KTN +GTLNMLGLAKRVGAR+L+ STSEVYGDP  HPQ E YWGH +PIG R+CY EGKR AET+   Y ++          F+T+  RM ++D  VV+NF+ QA
Sbjct:   90 RILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQA 281          
BLAST of EY720483 vs. ExPASy Swiss-Prot
Match: UXS1_PONAB (UDP-glucuronic acid decarboxylase 1 OS=Pongo abelii GN=UXS1 PE=2 SV=1)

HSP 1 Score: 246.128 bits (627), Expect = 1.721e-64
Identity = 122/192 (63.54%), Postives = 146/192 (76.04%), Query Frame = 1
Query:   28 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARVLITSTSEVYGDPLQHPQKETYWGHRHPIGVRSCYHEGKRXAETLNMDYTEERRGS*DC*N-FHTYVTRMCIHDCPVVNNFVAQA 600
            RI++TGGAGFVGSHL D+L+  G  V VVDNFFTGRK NV H  G+ NFELI HDVVEPL +EVDQIYHLA PASP +Y +NP+KT+KTN +GTLNMLGLAKRVGAR+L+ STSEVYGDP  HPQ E YWGH +PIG R+CY EGKR AET+   Y ++          F+T+  RM ++D  VV+NF+ QA
Sbjct:   90 RILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQA 281          
BLAST of EY720483 vs. ExPASy Swiss-Prot
Match: UXS1_MOUSE (UDP-glucuronic acid decarboxylase 1 OS=Mus musculus GN=Uxs1 PE=2 SV=1)

HSP 1 Score: 246.128 bits (627), Expect = 1.721e-64
Identity = 122/192 (63.54%), Postives = 146/192 (76.04%), Query Frame = 1
Query:   28 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARVLITSTSEVYGDPLQHPQKETYWGHRHPIGVRSCYHEGKRXAETLNMDYTEERRGS*DC*N-FHTYVTRMCIHDCPVVNNFVAQA 600
            RI++TGGAGFVGSHL D+L+  G  V VVDNFFTGRK NV H  G+ NFELI HDVVEPL +EVDQIYHLA PASP +Y +NP+KT+KTN +GTLNMLGLAKRVGAR+L+ STSEVYGDP  HPQ E YWGH +PIG R+CY EGKR AET+   Y ++          F+T+  RM ++D  VV+NF+ QA
Sbjct:   90 RILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQA 281          
BLAST of EY720483 vs. ExPASy Swiss-Prot
Match: UXS1_HUMAN (UDP-glucuronic acid decarboxylase 1 OS=Homo sapiens GN=UXS1 PE=1 SV=1)

HSP 1 Score: 246.128 bits (627), Expect = 1.721e-64
Identity = 122/192 (63.54%), Postives = 146/192 (76.04%), Query Frame = 1
Query:   28 RIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLEVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGARVLITSTSEVYGDPLQHPQKETYWGHRHPIGVRSCYHEGKRXAETLNMDYTEERRGS*DC*N-FHTYVTRMCIHDCPVVNNFVAQA 600
            RI++TGGAGFVGSHL D+L+  G  V VVDNFFTGRK NV H  G+ NFELI HDVVEPL +EVDQIYHLA PASP +Y +NP+KT+KTN +GTLNMLGLAKRVGAR+L+ STSEVYGDP  HPQ E YWGH +PIG R+CY EGKR AET+   Y ++          F+T+  RM ++D  VV+NF+ QA
Sbjct:   90 RILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRVGARLLLASTSEVYGDPEVHPQSEDYWGHVNPIGPRACYDEGKRVAETMCYAYMKQEGVEVRVARIFNTFGPRMHMNDGRVVSNFILQA 281          
BLAST of EY720483 vs. ExPASy Swiss-Prot
Match: GALE_METJA (Putative UDP-glucose 4-epimerase OS=Methanocaldococcus jannaschii GN=MJ0211 PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.251e-14
Identity = 56/157 (35.67%), Postives = 79/157 (50.32%), Query Frame = 1
Query:   31 IVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLLE------VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKR--VGARVLITSTSEVYGDPLQHPQKETYWGHRHPIGVRSCYHEGKRXAE 477
            I+VTGGAGF+GSH+VD+LI     VI++DN  TG K N+     NP  E +  D+ +  L E      V+ + H A   +  +   NPV     NV+GT+N+L + ++  +   V  +S   VYG+P   P  E      HPI   S Y   K   E
Sbjct:    2 ILVTGGAGFIGSHIVDKLIENNYDVIILDNLTTGNKNNI-----NPKAEFVNADIRDKDLDEKINFKDVEVVIHQAAQINVRNSVENPVYDGDINVLGTINILEMMRKYDIDKIVFASSGGAVYGEPNYLPVDE-----NHPINPLSPYGLSKYVGE 148          
BLAST of EY720483 vs. ExPASy Swiss-Prot
Match: GALE_LACCA (UDP-glucose 4-epimerase OS=Lactobacillus casei GN=galE PE=3 SV=1)

HSP 1 Score: 70.4774 bits (171), Expect = 1.294e-11
Identity = 43/137 (31.39%), Postives = 71/137 (51.82%), Query Frame = 1
Query:   25 LRIVVTGGAGFVGSHLVDRLIARGDSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLL-------EVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVG-ARVLITSTSEVYGDPLQHPQKET 411
            + I V GGAG++GSH V +L+A G+ V+V+DN  TG ++ V     +P     + D+ +   L       ++D I H A  +       +P+K    N  G + +L    + G  +++ +ST+  YG+P Q P KET
Sbjct:    1 MTIAVLGGAGYIGSHTVKQLLAAGEDVVVLDNLITGHRKAV-----DPRARFYQGDIRDYHFLSQVFSQEKIDGIVHFAAFSIVPESMKDPLKYFDNNTGGMITLLEAMNQFGIKKIVFSSTAATYGEPKQVPIKET 132          
BLAST of EY720483 vs. ExPASy Swiss-Prot
Match: GALE_STRMU (UDP-glucose 4-epimerase OS=Streptococcus mutans GN=galE PE=3 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 2.884e-11
Identity = 50/163 (30.67%), Postives = 82/163 (50.31%), Query Frame = 1
Query:   25 LRIVVTGGAGFVGSHLVDRLIARG-DSVIVVDNFFTGRKENVMHHFGNPNFELIRHDVVEPLLL--------EVDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRVGAR-VLITSTSEVYGDPLQHPQKETYWGHRHPIGVRSCYHEGKRXAETL 483
            + I+V GGAG++GSH+VDRLI +G + V+VVD+  TG +  V     +P  +  + D+ +   +        +VD + H A  +        P+K    N  G + +L +    G + ++ +ST+  YG P + P KET    + PI   + Y E K   ET+
Sbjct:    1 MAILVLGGAGYIGSHMVDRLIEKGEEEVVVVDSLVTGHRAAV-----HPAAKFYQGDLADREFMSMVFRENPDVDAVIHFAAYSLVAESMKKPLKYFDNNTAGMIKLLEVMSEFGVKYIVFSSTAATYGIPDEIPIKET--TPQRPI---NPYGESKLMMETI 153          
The following BLAST results are available for this feature:
BLAST of EY720483 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
UXS1_DANRE1.009e-6463.54UDP-glucuronic acid decarboxylase 1 OS=Danio rerio... [more]
UXS1_XENTR1.721e-6463.54UDP-glucuronic acid decarboxylase 1 OS=Xenopus tro... [more]
UXS1_RAT1.721e-6463.54UDP-glucuronic acid decarboxylase 1 OS=Rattus norv... [more]
UXS1_PONAB1.721e-6463.54UDP-glucuronic acid decarboxylase 1 OS=Pongo abeli... [more]
UXS1_MOUSE1.721e-6463.54UDP-glucuronic acid decarboxylase 1 OS=Mus musculu... [more]
UXS1_HUMAN1.721e-6463.54UDP-glucuronic acid decarboxylase 1 OS=Homo sapien... [more]
GALE_METJA1.251e-1435.67Putative UDP-glucose 4-epimerase OS=Methanocaldoco... [more]
GALE_LACCA1.294e-1131.39UDP-glucose 4-epimerase OS=Lactobacillus casei GN=... [more]
GALE_STRMU2.884e-1130.67UDP-glucose 4-epimerase OS=Streptococcus mutans GN... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-703-010-B05-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720483 ID=EY720483; Name=EY720483; organism=Citrus sinensis; type=EST; length=817bp
CCACGCGTCCGGAAACGGAAGGGGCTTAGAATAGTCGTCACGGGTGGGGC
GGGGTTCGTCGGGTCTCACCTCGTGGACCGTCTGATCGCGAGGGGCGACA
GCGTGATCGTTGTAGATAATTTCTTCACGGGAAGGAAAGAAAACGTGATG
CACCACTTTGGTAACCCGAATTTCGAGCTCATCAGACACGACGTCGTCGA
GCCTCTCTTGCTTGAAGTCGACCAGATCTACCATCTCGCTTGTCCCGCAT
CTCCAGTTCATTACAAATTCAACCCCGTCAAGACTATTAAGACGAATGTG
GTGGGAACATTGAACATGCTTGGATTGGCGAAAAGAGTGGGAGCGAGGGT
TCTTATTACGAGTACCAGTGAAGTATACGGTGACCCTCTTCAGCATCCAC
AGAAGGAGACTTACTGGGGGCACCGTCATCCTATCGGTGTCCGAAGTTGT
TACCATGAAGGAAAGCGANCTGCTGAAACGTTGAACATGGACTACACAGA
AGAGCGGCGTGGAAGTTAAGATTGCTAAAATTTTCACACTTATGTGACCC
GTATGTGTATCCATGATTGTCCCGTTGTCAATAATTTTGTGGCTCAGGCC
TAAAGAAAGGACCTTTGACTGTATTGGAGATTGGGAACCCACTTTGAGTT
TCCCAATTGGTTCTTAATTGGTGGGAGGTTCGAAGCCCCCCATGGGAGGG
AAAACTTTTGGCTCCTTTATCTTGGAAATCCGGTGTATTTACCTGCTTGA
ACTTGCCCAGTGGCCCAGAAACAATTACCCCAATGCCAATTTAATTCCGG
GCCACCCTGAGATTATC
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