EY720482

Overview
NameEY720482
Unique NameEY720482
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length879
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1794 contig Csv1_Contig1794:47..924. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
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BLAST of EY720482 vs. ExPASy Swiss-Prot
Match: FIP37_ARATH (FKBP12-interacting protein of 37 kDa OS=Arabidopsis thaliana GN=FIP37 PE=1 SV=1)

HSP 1 Score: 228.794 bits (582), Expect = 3.175e-59
Identity = 128/234 (54.70%), Postives = 161/234 (68.80%), Query Frame = 2 
Query:  173 APGVATGMILSLRESLQNCKDTLATCQLELEAAKSEIQKWHSSFQNELFIPPGTSPEPRLVINYLQTLKSSXXXXXXXXXXXXXXXXXFIVTFAKREQEIAELKSAVRDLKAQLKPPLMQARRLLLDPAIHEEFRRLKNLVEGEGQKSEGAGGKYSCCFFYCKQQDGESTDGKV*DFGRGK**ELVVKMXEGETHPLSVKLALQKSLNAELKSQFEALYKHIDGLADYC*KINE 874
            APGV TGMILSLR SL+NCKD LA+CQ ELE+AK+EIQKW S+FQNE F+P G SPEPR +I+Y+Q LKSS                  IV +AKREQE+AELKSAVRDLK+QLKP  MQARRLLLDPAIHEEF RLKNLVE + +K +      +   F  + ++G+    K     + +  E+  +  EG+ H L++KLA+QKS NAEL+SQFE LYKH++ L +   + NE
Sbjct:   46 APGVRTGMILSLRGSLKNCKDDLASCQNELESAKTEIQKWKSAFQNESFVPAGKSPEPRFLIDYIQNLKSSEKSLKEQLEIAKRKEASCIVQYAKREQEMAELKSAVRDLKSQLKPASMQARRLLLDPAIHEEFSRLKNLVEEKDKKIKELQDNIAAVTFTPQSKNGKMLMAKCRTL-QEENEEIGHQAAEGKIHELAIKLAMQKSQNAELRSQFEGLYKHMEELTNDVERSNE 278
The following BLAST results are available for this feature:
BLAST of EY720482 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
FIP37_ARATH3.175e-5954.70FKBP12-interacting protein of 37 kDa OS=Arabidopsi... [more]
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Properties
Property NameValue
Genbank descriptionCS00-C3-703-010-B03-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720482 ID=EY720482; Name=EY720482; organism=Citrus sinensis; type=EST; length=879bp
CCACGCGTCCGCTTCACGGACTCATCTCGACGATGACGACGATTTTGGCG
GCGATTTTTCTGCTAATCATAATTCTAGACGTTCTGGCTCGAAGAGAAGC
TTCGGTGATATTGAAGATGACGAGGACGATATTTTTGGTTCAAGAAAGGC
TAATTCAAAAGTGGAAGAAACTGCTCCTGGAGTTGCAACTGGGATGATTT
TGTCTCTGCGTGAGAGTCTTCAGAACTGTAAGGACACACTTGCAACATGC
CAATTGGAACTTGAAGCTGCGAAGTCGGAGATTCAGAAGTGGCATTCTTC
ATTCCAAAATGAGCTCTTCATACCTCCTGGGACATCTCCTGAACCTAGAT
TAGTCATCAATTATCTTCAGACCCTAAAATCCTCCGAGGAGATGCTGAAG
GAACAGTTAGAAAAAGCAAAGAAAAAGGAAGCTGCCTTCATTGTAACATT
TGCAAAACGGGAGCAGGAGATAGCGGAGTTGAAGTCTGCGGTTCGAGATT
TGAAGGCTCAGCTTAAGCCACCATTGATGCAGGCAAGGAGGTTACTGCTA
GATCCAGCAATTCATGAAGAATTTAGACGTTTGAAGAATTTGGTTGAGGG
AGAAGGACAAAAAAGTGAAGGAGCTGGAGGAAAATATAGCTGCTGTTTCT
TTTACTGCAAACAGCAAGATGGGGAAAGCACTGATGGCAAAGTGTAAGAC
TTTGGCAGAGGGAAATGATGAGAATTGGTCGTCAAAATGANGGAAGGCGA
GACACATCCNTTGTCAGTAAAACTCGCTTTGCAAAAATCTCTAAATGCAG
AACTTAAAAGTCAATTTGAAGCACTCTATAAACATATTGATGGACTGGCG
GATTATTGTTAAAAGATCAATGAAATGGT
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