EY720463

Overview
NameEY720463
Unique NameEY720463
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length489
Libraries
Library NameType
Sweet orange fruit, development stadium (4 of 6)cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11192 contig Csv1_Contig11192:1..489. BLAST: Citrus Unigene V1 Contigs to SwissProt
Homology
BLAST of EY720463 vs. ExPASy Swiss-Prot
Match: Y895_HAEIN (Uncharacterized transporter HI0895 OS=Haemophilus influenzae GN=HI0895 PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 5.377e-37
Identity = 76/168 (45.24%), Postives = 118/168 (70.24%), Query Frame = 2
Query:    2 VVSLHSVIEPNKLKQFNQQNSATFQGIPAPGVSLGQAVAFLQAHS-QQLPASFSHDWQADSRQFIHEGNALMLTFLFALIVIYMVLAAQYESLTDPLIILITVPLSICGALIPL------ALGLATINIYTQIGLVTLIGLISKHGILMVEFANELQLLYRCTPAQAI 484
            V+S+    +P  L +F+Q NSA    +P PG+S G A+A+LQ  +   LP  ++ D+++++RQ + EGNAL +TF  A+I+I++VLA Q+ES+ DP++I+I+VPL++ GAL+ L      ++   T+NIY+Q+GL+TL+GLI+KHGILM E A E QL +  T  +AI
Sbjct:  783 VISMKLETQPTSLPRFSQLNSAEISAVPMPGISSGDAIAWLQQQATDNLPQGYTFDFKSEARQLVQEGNALAVTFALAVIIIFLVLAIQFESIRDPMVIMISVPLAVSGALVSLNILSFFSIAGTTLNIYSQVGLITLVGLITKHGILMCEVAKEEQLNHGKTRIEAI 950          
BLAST of EY720463 vs. ExPASy Swiss-Prot
Match: BEPE_BRUSU (Efflux pump membrane transporter bepE OS=Brucella suis GN=bepE PE=1 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 7.538e-23
Identity = 57/147 (38.78%), Postives = 90/147 (61.22%), Query Frame = 2
Query:    2 VVSLHSVIEPNKLKQFNQQNSATFQGIPAPGVSLGQAVAFLQ-AHSQQLPASFSHDWQADSRQFIHEGNALMLTFLFALIVIYMVLAAQYESLTDPLIILITVPLSICGALIPLALGLATINIYTQIGLVTLIGLISKHGILMVEFA 439
            +V++  ++ P++L++FN  N+A   G PAPG + G A+  +Q   +Q LP  +   W   + Q +          +F LI+++++LAAQYE  + PL ++  VP +I GAL+   L   T ++Y QIGLVTLIGL +K+ IL+VEFA
Sbjct:  800 LVTVKRIVGPDQLERFNAFNAAKVTGNPAPGYTSGDAIKAMQEVAAQVLPQGYQIAWTGSAYQEVSTSGTGSQAMIFGLIMVFLILAAQYERWSLPLAVITAVPFAIFGALLATDLRGLTNDVYFQIGLVTLIGLAAKNAILIVEFA 946          
BLAST of EY720463 vs. ExPASy Swiss-Prot
Match: BEPG_BRUSU (Efflux pump membrane transporter bepG OS=Brucella suis GN=bepG PE=1 SV=1)

HSP 1 Score: 98.9821 bits (245), Expect = 1.203e-20
Identity = 54/149 (36.24%), Postives = 87/149 (58.39%), Query Frame = 2
Query:    2 VVSLHSVIEPNKLKQFNQQNSATFQGIPAPGVSLGQAVAFL-QAHSQQLPASFSHDWQADSRQFIHEGNALMLTFLFALIVIYMVLAAQYESLTDPLIILITVPLSICGALIPLALGLATINIYTQIGLVTLIGLISKHGILMVEFANE 445
            +VS+   + P  + ++N   SA+ QG  APGVS G+A+A + Q     LP+ + ++W   + Q +       +    A++  Y+ L A YES T P+ +L++V   + GA++ L +   + +IY QIG+V LI L SK+GIL+VEFA E
Sbjct:  804 LVSVEERLGPLYITRYNNYRSASIQGNAAPGVSSGEALAAMAQVSKTTLPSGYGYEWTGTALQELQAAGQTSMILALAVLFAYLFLVALYESWTIPVGVLLSVTAGLAGAMLALWITGLSNDIYAQIGIVVLIALASKNGILIVEFAKE 952          
BLAST of EY720463 vs. ExPASy Swiss-Prot
Match: ACRF_ECOLI (Acriflavine resistance protein F OS=Escherichia coli (strain K12) GN=acrF PE=3 SV=2)

HSP 1 Score: 97.4413 bits (241), Expect = 3.502e-20
Identity = 53/145 (36.55%), Postives = 82/145 (56.55%), Query Frame = 2
Query:   14 HSVIEPNKLKQFNQQNSATFQGIPAPGVSLGQAVAFLQAHSQQLPASFSHDWQADSRQFIHEGNALMLTFLFALIVIYMVLAAQYESLTDPLIILITVPLSICGALIPLALGLATINIYTQIGLVTLIGLISKHGILMVEFANEL 448
            H V    +L+++N   S   QG  APG S G A+A ++  + +LPA   +DW   S Q    GN        + +V+++ LAA YES + P+ +++ VPL I G L+   L     ++Y  +GL+T IGL +K+ IL+VEFA +L
Sbjct:  807 HWVYGSPRLERYNGLPSMEIQGEAAPGTSSGDAMALMENLASKLPAGIGYDWTGMSYQERLSGNQAPALVAISFVVVFLCLAALYESWSIPVSVMLVVPLGIVGVLLAATLFNQKNDVYFMVGLLTTIGLSAKNAILIVEFAKDL 951          
BLAST of EY720463 vs. ExPASy Swiss-Prot
Match: ACRD_ECOLI (Probable aminoglycoside efflux pump OS=Escherichia coli (strain K12) GN=acrD PE=3 SV=3)

HSP 1 Score: 97.4413 bits (241), Expect = 3.502e-20
Identity = 51/138 (36.96%), Postives = 85/138 (61.59%), Query Frame = 2
Query:   35 KLKQFNQQNSATFQGIPAPGVSLGQAVAFLQAHSQQLPASFSHDWQADSRQFIHEGNALMLTFLFALIVIYMVLAAQYESLTDPLIILITVPLSICGALIPLALGLATINIYTQIGLVTLIGLISKHGILMVEFANEL 448
            +L+++N  ++    G  APGVS G A+  +++  +QLP  F  +W A S Q    G      +  +L+V+++ LAA YES + P  +++ VPL + GAL+   +     ++Y Q+GL+T+IGL +K+ IL+VEFANE+
Sbjct:  813 RLERYNGYSAVEIVGEAAPGVSTGTAMDIMESLVKQLPNGFGLEWTAMSYQERLSGAQAPALYAISLLVVFLCLAALYESWSVPFSVMLVVPLGVIGALLATWMRGLENDVYFQVGLLTVIGLSAKNAILIVEFANEM 950          
BLAST of EY720463 vs. ExPASy Swiss-Prot
Match: ACRB_ECOLI (Acriflavine resistance protein B OS=Escherichia coli (strain K12) GN=acrB PE=1 SV=1)

HSP 1 Score: 97.0561 bits (240), Expect = 4.573e-20
Identity = 51/138 (36.96%), Postives = 81/138 (58.70%), Query Frame = 2
Query:   35 KLKQFNQQNSATFQGIPAPGVSLGQAVAFLQAHSQQLPASFSHDWQADSRQFIHEGNALMLTFLFALIVIYMVLAAQYESLTDPLIILITVPLSICGALIPLALGLATINIYTQIGLVTLIGLISKHGILMVEFANEL 448
            +L+++N   S    G  APG S G+A+  ++  + +LP    +DW   S Q    GN     +  +LIV+++ LAA YES + P  +++ VPL + GAL+       T ++Y Q+GL+T IGL +K+ IL+VEFA +L
Sbjct:  815 RLERYNGLPSMEILGQAAPGKSTGEAMELMEQLASKLPTGVGYDWTGMSYQERLSGNQAPSLYAISLIVVFLCLAALYESWSIPFSVMLVVPLGVIGALLAATFRGLTNDVYFQVGLLTTIGLSAKNAILIVEFAKDL 952          
BLAST of EY720463 vs. ExPASy Swiss-Prot
Match: TTGB_PSEPU (Toluene efflux pump membrane transporter ttgB OS=Pseudomonas putida GN=ttgB PE=2 SV=2)

HSP 1 Score: 95.9005 bits (237), Expect = 1.019e-19
Identity = 50/138 (36.23%), Postives = 83/138 (60.14%), Query Frame = 2
Query:   35 KLKQFNQQNSATFQGIPAPGVSLGQAVAFLQAHSQQLPASFSHDWQADSRQFIHEGNALMLTFLFALIVIYMVLAAQYESLTDPLIILITVPLSICGALIPLALGLATINIYTQIGLVTLIGLISKHGILMVEFANEL 448
            KL ++N   +    G PAPG S G+A+A ++  + +LP+     W   S +    G+ +   F  +++ +++ LAA YES + P+ +++ VPL I GALI  +L   + ++Y  +GL+T IGL +K+ IL+VEFA EL
Sbjct:  813 KLSRYNGVEAMEILGAPAPGYSTGEAMAEVERIAGELPSGIGFSWTGMSYEEKLSGSQMPALFALSVLFVFLCLAALYESWSIPIAVVLVVPLGIIGALIATSLRGLSNDVYFLVGLLTTIGLAAKNAILIVEFAKEL 950          
BLAST of EY720463 vs. ExPASy Swiss-Prot
Match: TTGB_PSEPK (Probable efflux pump membrane transporter ttgB OS=Pseudomonas putida (strain KT2440) GN=ttgB PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.019e-19
Identity = 50/138 (36.23%), Postives = 83/138 (60.14%), Query Frame = 2
Query:   35 KLKQFNQQNSATFQGIPAPGVSLGQAVAFLQAHSQQLPASFSHDWQADSRQFIHEGNALMLTFLFALIVIYMVLAAQYESLTDPLIILITVPLSICGALIPLALGLATINIYTQIGLVTLIGLISKHGILMVEFANEL 448
            KL ++N   +    G PAPG S G+A+A ++  + +LP+     W   S +    G+ +   F  +++ +++ LAA YES + P+ +++ VPL I GALI  +L   + ++Y  +GL+T IGL +K+ IL+VEFA EL
Sbjct:  813 KLSRYNGVEAMEILGAPAPGYSTGEAMAEVERIAGELPSGIGFSWTGMSYEEKLSGSQMPALFALSVLFVFLCLAALYESWSIPIAVVLVVPLGIIGALIATSLRGLSNDVYFLVGLLTTIGLAAKNAILIVEFAKEL 950          
BLAST of EY720463 vs. ExPASy Swiss-Prot
Match: MEPB_PSEPU (Multidrug/solvent efflux pump membrane transporter mepB OS=Pseudomonas putida GN=mepB PE=1 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.019e-19
Identity = 50/138 (36.23%), Postives = 83/138 (60.14%), Query Frame = 2
Query:   35 KLKQFNQQNSATFQGIPAPGVSLGQAVAFLQAHSQQLPASFSHDWQADSRQFIHEGNALMLTFLFALIVIYMVLAAQYESLTDPLIILITVPLSICGALIPLALGLATINIYTQIGLVTLIGLISKHGILMVEFANEL 448
            KL ++N   +    G PAPG S G+A+A ++  + +LP+     W   S +    G+ +   F  +++ +++ LAA YES + P+ +++ VPL I GALI  +L   + ++Y  +GL+T IGL +K+ IL+VEFA EL
Sbjct:  813 KLSRYNGVEAMEILGAPAPGYSTGEAMAEVERIAGELPSGIGFSWTGMSYEEKLSGSQMPALFALSVLFVFLCLAALYESWSIPIAVVLVVPLGIIGALIATSLRGLSNDVYFLVGLLTTIGLAAKNAILIVEFAKEL 950          
BLAST of EY720463 vs. ExPASy Swiss-Prot
Match: ARPB_PSEPU (Antibiotic efflux pump membrane transporter arpB OS=Pseudomonas putida GN=arpB PE=2 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 1.019e-19
Identity = 50/138 (36.23%), Postives = 83/138 (60.14%), Query Frame = 2
Query:   35 KLKQFNQQNSATFQGIPAPGVSLGQAVAFLQAHSQQLPASFSHDWQADSRQFIHEGNALMLTFLFALIVIYMVLAAQYESLTDPLIILITVPLSICGALIPLALGLATINIYTQIGLVTLIGLISKHGILMVEFANEL 448
            KL ++N   +    G PAPG S G+A+A ++  + +LP+     W   S +    G+ +   F  +++ +++ LAA YES + P+ +++ VPL I GALI  +L   + ++Y  +GL+T IGL +K+ IL+VEFA EL
Sbjct:  813 KLSRYNGVEAMEILGAPAPGYSTGEAMAEVERIAGELPSGIGFSWTGMSYEEKLSGSQMPALFALSVLFVFLCLAALYESWSIPIAVVLVVPLGIIGALIATSLRGLSNDVYFLVGLLTTIGLAAKNAILIVEFAKEL 950          
The following BLAST results are available for this feature:
BLAST of EY720463 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 95
Match NameE-valueIdentityDescription
Y895_HAEIN5.377e-3745.24Uncharacterized transporter HI0895 OS=Haemophilus ... [more]
BEPE_BRUSU7.538e-2338.78Efflux pump membrane transporter bepE OS=Brucella ... [more]
BEPG_BRUSU1.203e-2036.24Efflux pump membrane transporter bepG OS=Brucella ... [more]
ACRF_ECOLI3.502e-2036.55Acriflavine resistance protein F OS=Escherichia co... [more]
ACRD_ECOLI3.502e-2036.96Probable aminoglycoside efflux pump OS=Escherichia... [more]
ACRB_ECOLI4.573e-2036.96Acriflavine resistance protein B OS=Escherichia co... [more]
TTGB_PSEPU1.019e-1936.23Toluene efflux pump membrane transporter ttgB OS=P... [more]
TTGB_PSEPK1.019e-1936.23Probable efflux pump membrane transporter ttgB OS=... [more]
MEPB_PSEPU1.019e-1936.23Multidrug/solvent efflux pump membrane transporter... [more]
ARPB_PSEPU1.019e-1936.23Antibiotic efflux pump membrane transporter arpB O... [more]

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Properties
Property NameValue
Genbank descriptionCS00-C3-703-009-G09-CT.F Sweet orange fruit, development stadium (4 of 6) Citrus sinensis cDNA, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EY720463 ID=EY720463; Name=EY720463; organism=Citrus sinensis; type=EST; length=489bp
CGTGGTGAGCCTGCACAGCGTGATCGAGCCGAACAAGCTCAAGCAGTTCA
ATCAGCAGAACAGCGCGACCTTCCAGGGCATCCCGGCGCCGGGGGTCAGC
CTGGGTCAGGCGGTGGCGTTTTTGCAGGCGCACAGCCAACAGCTGCCGGC
CAGCTTCAGCCATGACTGGCAGGCCGATTCGCGCCAGTTCATTCACGAAG
GCAATGCGTTGATGCTGACGTTCCTGTTTGCGCTGATCGTGATCTATATG
GTGCTGGCCGCGCAGTATGAAAGCCTGACCGATCCGCTGATCATCCTGAT
CACGGTGCCGCTGTCGATCTGCGGCGCGTTGATCCCGCTGGCCCTGGGTT
TGGCCACGATCAACATCTACACGCAGATTGGCTTGGTGACGTTGATCGGA
CTGATCAGCAAACACGGGATCCTGATGGTCGAGTTCGCCAACGAGTTACA
GCTGCTATACCGCTGCACACCGGCTCAGGCGATCATTCG
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